RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
ARHGEF28-201ENST00000296794 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-201ENST00000296794 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-201ENST00000296794 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
ARHGEF28-201ENST00000296794 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.9
ARHGEF28-201ENST00000296794 CASC1Q6TDU7 716 aa20.64■□□□□ 0.89
ARHGEF28-201ENST00000296794 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
ARHGEF28-201ENST00000296794 MS4A1P11836 297 aa20.62■□□□□ 0.89
ARHGEF28-201ENST00000296794 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
ARHGEF28-201ENST00000296794 U2SURPO15042 1029 aaKnown RBP20.61■□□□□ 0.89
ARHGEF28-201ENST00000296794 RALBP1Q15311 655 aa20.6■□□□□ 0.89
ARHGEF28-201ENST00000296794 NAP1L5Q96NT1 182 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF28-201ENST00000296794 PTMAP06454 111 aaKnown RBP20.59■□□□□ 0.89
ARHGEF28-201ENST00000296794 SAFB2Q14151 953 aaKnown RBP eCLIP20.59■□□□□ 0.89
ARHGEF28-201ENST00000296794 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
ARHGEF28-201ENST00000296794 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.89
ARHGEF28-201ENST00000296794 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.88
ARHGEF28-201ENST00000296794 FHOD3Q2V2M9 1422 aa20.57■□□□□ 0.88
ARHGEF28-201ENST00000296794 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
ARHGEF28-201ENST00000296794 NPHP1O15259 732 aa20.56■□□□□ 0.88
ARHGEF28-201ENST00000296794 KIF3BO15066 747 aa20.56■□□□□ 0.88
ARHGEF28-201ENST00000296794 STK26Q9P289 416 aa20.55■□□□□ 0.88
ARHGEF28-201ENST00000296794 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
ARHGEF28-201ENST00000296794 ROCK2O75116 1388 aaKnown RBP20.55■□□□□ 0.88
ARHGEF28-201ENST00000296794 SOX12O15370 315 aa20.55■□□□□ 0.88
ARHGEF28-201ENST00000296794 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
ARHGEF28-201ENST00000296794 ANKRD30AQ9BXX3 1397 aa20.54■□□□□ 0.88
ARHGEF28-201ENST00000296794 NUP155O75694 1391 aa20.53■□□□□ 0.88
ARHGEF28-201ENST00000296794 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
ARHGEF28-201ENST00000296794 TPRNQ4KMQ1 711 aa20.52■□□□□ 0.88
ARHGEF28-201ENST00000296794 HSCBQ8IWL3 235 aa20.52■□□□□ 0.88
ARHGEF28-201ENST00000296794 IPO9Q96P70 1041 aaKnown RBP20.51■□□□□ 0.87
ARHGEF28-201ENST00000296794 SPAG9O60271 1321 aaKnown RBP20.51■□□□□ 0.87
ARHGEF28-201ENST00000296794 SPRYD3Q8NCJ5 442 aa20.49■□□□□ 0.87
ARHGEF28-201ENST00000296794 DNTTIP2Q5QJE6 756 aaKnown RBP20.49■□□□□ 0.87
ARHGEF28-201ENST00000296794 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF28-201ENST00000296794 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
ARHGEF28-201ENST00000296794 L1TD1Q5T7N2 865 aaKnown RBP20.47■□□□□ 0.87
ARHGEF28-201ENST00000296794 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
ARHGEF28-201ENST00000296794 HNRNPMP52272 730 aaKnown RBP eCLIP20.46■□□□□ 0.872e-6■■■□□ 18.2
ARHGEF28-201ENST00000296794 EID1Q9Y6B2 187 aa20.46■□□□□ 0.87
ARHGEF28-201ENST00000296794 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
ARHGEF28-201ENST00000296794 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
ARHGEF28-201ENST00000296794 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
ARHGEF28-201ENST00000296794 PAK3O75914 559 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF28-201ENST00000296794 PRKRIP1Q9H875 184 aaPredicted RBP20.41■□□□□ 0.86
ARHGEF28-201ENST00000296794 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
ARHGEF28-201ENST00000296794 PDE3BQ13370 1112 aa20.4■□□□□ 0.86
ARHGEF28-201ENST00000296794 SLKQ9H2G2 1235 aaPredicted RBP20.4■□□□□ 0.86
ARHGEF28-201ENST00000296794 PTPRGP23470 1445 aa20.39■□□□□ 0.85
ARHGEF28-201ENST00000296794 PLCB2Q00722 1185 aa20.39■□□□□ 0.85
ARHGEF28-201ENST00000296794 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
ARHGEF28-201ENST00000296794 ZRSR1Q15695 479 aaKnown RBP20.38■□□□□ 0.85
ARHGEF28-201ENST00000296794 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
ARHGEF28-201ENST00000296794 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
ARHGEF28-201ENST00000296794 RWDD1Q9H446 243 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF28-201ENST00000296794 OS9Q13438 667 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF28-201ENST00000296794 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
ARHGEF28-201ENST00000296794 ZBED9Q6R2W3 1325 aa20.35■□□□□ 0.85
ARHGEF28-201ENST00000296794 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
ARHGEF28-201ENST00000296794 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.857e-6■■■□□ 19.2
ARHGEF28-201ENST00000296794 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
ARHGEF28-201ENST00000296794 IPO8O15397 1037 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-201ENST00000296794 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
ARHGEF28-201ENST00000296794 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
ARHGEF28-201ENST00000296794 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
ARHGEF28-201ENST00000296794 CCDC146Q8IYE0 955 aa20.31■□□□□ 0.84
ARHGEF28-201ENST00000296794 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF28-201ENST00000296794 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
ARHGEF28-201ENST00000296794 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
ARHGEF28-201ENST00000296794 PHLDB1Q86UU1 1377 aa20.29■□□□□ 0.84
ARHGEF28-201ENST00000296794 MSNP26038 577 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-201ENST00000296794 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
ARHGEF28-201ENST00000296794 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
ARHGEF28-201ENST00000296794 EIF3AQ14152 1382 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-201ENST00000296794 KCNJ4P48050 445 aa20.27■□□□□ 0.84
ARHGEF28-201ENST00000296794 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
ARHGEF28-201ENST00000296794 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
ARHGEF28-201ENST00000296794 PDE4AP27815 886 aa20.26■□□□□ 0.83
ARHGEF28-201ENST00000296794 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-201ENST00000296794 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
ARHGEF28-201ENST00000296794 MCCP23508 829 aa20.25■□□□□ 0.83
ARHGEF28-201ENST00000296794 RRP1P56182 461 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-201ENST00000296794 CENPJQ9HC77 1338 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-201ENST00000296794 APBB1O00213 710 aa20.25■□□□□ 0.83
ARHGEF28-201ENST00000296794 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-201ENST00000296794 CLUAP1Q96AJ1 413 aa20.25■□□□□ 0.83
ARHGEF28-201ENST00000296794 KIF21BO75037 1637 aa20.24■□□□□ 0.83
ARHGEF28-201ENST00000296794 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-201ENST00000296794 USP47Q96K76 1375 aa20.24■□□□□ 0.83
ARHGEF28-201ENST00000296794 PLIN1O60240 522 aa20.23■□□□□ 0.83
ARHGEF28-201ENST00000296794 FGD1P98174 961 aa20.23■□□□□ 0.83
ARHGEF28-201ENST00000296794 CCDC9Q9Y3X0 531 aaKnown RBP20.23■□□□□ 0.83
ARHGEF28-201ENST00000296794 PANK3Q9H999 370 aa20.23■□□□□ 0.83
ARHGEF28-201ENST00000296794 SMC4Q9NTJ3 1288 aa20.23■□□□□ 0.83
ARHGEF28-201ENST00000296794 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-201ENST00000296794 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
ARHGEF28-201ENST00000296794 USP35Q9P2H5 1018 aa20.2■□□□□ 0.83
ARHGEF28-201ENST00000296794 GOLGA6L4A6NEF3 574 aa20.2■□□□□ 0.82
ARHGEF28-201ENST00000296794 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms