RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 NESP48681 1621 aa23.92■■□□□ 1.42
SIM2-201ENST00000290399 KIF3BO15066 747 aa23.9■■□□□ 1.42
SIM2-201ENST00000290399 BICRAQ9NZM4 1560 aa23.9■■□□□ 1.42
SIM2-201ENST00000290399 MYOM3Q5VTT5 1437 aa23.9■■□□□ 1.42
SIM2-201ENST00000290399 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
SIM2-201ENST00000290399 SAFB2Q14151 953 aaKnown RBP eCLIP23.88■■□□□ 1.41
SIM2-201ENST00000290399 CASKIN1Q8WXD9 1431 aa23.88■■□□□ 1.41
SIM2-201ENST00000290399 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
SIM2-201ENST00000290399 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
SIM2-201ENST00000290399 FRAT1Q92837 279 aaPredicted RBP23.87■■□□□ 1.41
SIM2-201ENST00000290399 PTPRGP23470 1445 aa23.87■■□□□ 1.41
SIM2-201ENST00000290399 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
SIM2-201ENST00000290399 ANP32EQ9BTT0 268 aa23.86■■□□□ 1.41
SIM2-201ENST00000290399 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
SIM2-201ENST00000290399 NUDCQ9Y266 331 aa23.85■■□□□ 1.41
SIM2-201ENST00000290399 SPAG9O60271 1321 aaKnown RBP23.85■■□□□ 1.41
SIM2-201ENST00000290399 RALBP1Q15311 655 aa23.85■■□□□ 1.41
SIM2-201ENST00000290399 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
SIM2-201ENST00000290399 MAPK8IP3Q9UPT6 1336 aa23.84■■□□□ 1.41
SIM2-201ENST00000290399 RGS3P49796 1198 aa23.83■■□□□ 1.41
SIM2-201ENST00000290399 C14orf37Q86TY3 774 aa23.83■■□□□ 1.4
SIM2-201ENST00000290399 MLECQ14165 292 aa23.82■■□□□ 1.4
SIM2-201ENST00000290399 RBM19Q9Y4C8 960 aaKnown RBP23.82■■□□□ 1.4
SIM2-201ENST00000290399 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
SIM2-201ENST00000290399 MORC1Q86VD1 984 aa23.8■■□□□ 1.4
SIM2-201ENST00000290399 MYH16Q9H6N6 1097 aa23.8■■□□□ 1.4
SIM2-201ENST00000290399 UACAQ9BZF9 1416 aa23.8■■□□□ 1.4
SIM2-201ENST00000290399 SRPK2P78362 688 aaKnown RBP23.8■■□□□ 1.4
SIM2-201ENST00000290399 FTSJ3Q8IY81 847 aaKnown RBP23.8■■□□□ 1.4
SIM2-201ENST00000290399 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
SIM2-201ENST00000290399 LAS1LQ9Y4W2 734 aaKnown RBP23.78■■□□□ 1.4
SIM2-201ENST00000290399 STK26Q9P289 416 aa23.78■■□□□ 1.4
SIM2-201ENST00000290399 POLA1P09884 1462 aaPredicted RBP23.77■■□□□ 1.4
SIM2-201ENST00000290399 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
SIM2-201ENST00000290399 TOPBP1Q92547 1522 aa23.76■■□□□ 1.39
SIM2-201ENST00000290399 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
SIM2-201ENST00000290399 DDRGK1Q96HY6 314 aa23.75■■□□□ 1.39
SIM2-201ENST00000290399 RCAN3Q9UKA8 241 aa23.75■■□□□ 1.39
SIM2-201ENST00000290399 ERICH6BQ5W0A0 696 aa23.74■■□□□ 1.39
SIM2-201ENST00000290399 CCDC144AA2RUR9 1427 aa23.73■■□□□ 1.39
SIM2-201ENST00000290399 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
SIM2-201ENST00000290399 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
SIM2-201ENST00000290399 CC2D2AQ9P2K1 1620 aa23.72■■□□□ 1.39
SIM2-201ENST00000290399 USP47Q96K76 1375 aa23.71■■□□□ 1.39
SIM2-201ENST00000290399 ARXQ96QS3 562 aa23.71■■□□□ 1.39
SIM2-201ENST00000290399 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
SIM2-201ENST00000290399 BECN1Q14457 450 aa23.67■■□□□ 1.38
SIM2-201ENST00000290399 NOP58Q9Y2X3 529 aaKnown RBP23.64■■□□□ 1.38
SIM2-201ENST00000290399 PANK3Q9H999 370 aa23.63■■□□□ 1.37
SIM2-201ENST00000290399 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
SIM2-201ENST00000290399 WASHC2CQ9Y4E1 1318 aa23.63■■□□□ 1.37
SIM2-201ENST00000290399 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
SIM2-201ENST00000290399 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
SIM2-201ENST00000290399 ANP32BQ92688 251 aaKnown RBP23.61■■□□□ 1.37
SIM2-201ENST00000290399 U2AF1L5P0DN76 240 aaPredicted RBP23.6■■□□□ 1.37
SIM2-201ENST00000290399 U2AF1Q01081 240 aaKnown RBP eCLIP23.6■■□□□ 1.37
SIM2-201ENST00000290399 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
SIM2-201ENST00000290399 EFCAB5A4FU69 1503 aa23.6■■□□□ 1.37
SIM2-201ENST00000290399 MYBBP1AQ9BQG0 1328 aaKnown RBP23.6■■□□□ 1.37
SIM2-201ENST00000290399 SOX12O15370 315 aa23.59■■□□□ 1.37
SIM2-201ENST00000290399 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
SIM2-201ENST00000290399 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
SIM2-201ENST00000290399 EIF3AQ14152 1382 aaKnown RBP23.58■■□□□ 1.37
SIM2-201ENST00000290399 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.37
SIM2-201ENST00000290399 WASHC2AQ641Q2 1341 aa23.58■■□□□ 1.36
SIM2-201ENST00000290399 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
SIM2-201ENST00000290399 PRDM2Q13029 1718 aa23.57■■□□□ 1.36
SIM2-201ENST00000290399 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
SIM2-201ENST00000290399 PNNQ9H307 717 aaKnown RBP23.56■■□□□ 1.36
SIM2-201ENST00000290399 CCDC146Q8IYE0 955 aa23.55■■□□□ 1.36
SIM2-201ENST00000290399 MS4A1P11836 297 aa23.55■■□□□ 1.36
SIM2-201ENST00000290399 ZBED9Q6R2W3 1325 aa23.54■■□□□ 1.36
SIM2-201ENST00000290399 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
SIM2-201ENST00000290399 HDGFP51858 240 aaKnown RBP23.53■■□□□ 1.36
SIM2-201ENST00000290399 GOLGA2Q08379 1002 aa23.53■■□□□ 1.36
SIM2-201ENST00000290399 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
SIM2-201ENST00000290399 HDGFL2Q7Z4V5 671 aaPredicted RBP23.53■■□□□ 1.36
SIM2-201ENST00000290399 LMOD2Q6P5Q4 547 aa23.52■■□□□ 1.36
SIM2-201ENST00000290399 HFM1A2PYH4 1435 aa23.51■■□□□ 1.35
SIM2-201ENST00000290399 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
SIM2-201ENST00000290399 MRC2Q9UBG0 1479 aa23.48■■□□□ 1.35
SIM2-201ENST00000290399 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
SIM2-201ENST00000290399 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
SIM2-201ENST00000290399 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.35
SIM2-201ENST00000290399 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
SIM2-201ENST00000290399 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
SIM2-201ENST00000290399 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
SIM2-201ENST00000290399 TCERG1O14776 1098 aaKnown RBP23.43■■□□□ 1.34
SIM2-201ENST00000290399 CNTLNQ9NXG0 1405 aa23.43■■□□□ 1.34
SIM2-201ENST00000290399 IFT140Q96RY7 1462 aa23.42■■□□□ 1.34
SIM2-201ENST00000290399 CHMP4BQ9H444 224 aaKnown RBP23.42■■□□□ 1.34
SIM2-201ENST00000290399 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
SIM2-201ENST00000290399 TERF2IPQ9NYB0 399 aa23.41■■□□□ 1.34
SIM2-201ENST00000290399 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
SIM2-201ENST00000290399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.4■■□□□ 1.34
SIM2-201ENST00000290399 NAIPQ13075 1403 aa23.39■■□□□ 1.34
SIM2-201ENST00000290399 A0A0G2JS52 829 aa23.39■■□□□ 1.33
SIM2-201ENST00000290399 PLIN1O60240 522 aa23.39■■□□□ 1.33
SIM2-201ENST00000290399 TROQ12816 1431 aaPredicted RBP23.39■■□□□ 1.33
SIM2-201ENST00000290399 CLUAP1Q96AJ1 413 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms