RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
SMAD6-201ENST00000288840 CDK13Q14004 1512 aaKnown RBP21.38■■□□□ 1.01
SMAD6-201ENST00000288840 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
SMAD6-201ENST00000288840 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
SMAD6-201ENST00000288840 ST20-MTHFSA0A0A6YYL1 179 aa21.36■■□□□ 1.01
SMAD6-201ENST00000288840 ANP32AP39687 249 aaKnown RBP21.34■■□□□ 1.01
SMAD6-201ENST00000288840 RTL5Q5HYW3 569 aaPredicted RBP21.34■■□□□ 1.01
SMAD6-201ENST00000288840 EFCAB5A4FU69 1503 aa21.33■■□□□ 1
SMAD6-201ENST00000288840 CCDC7Q96M83 1385 aa21.32■■□□□ 1
SMAD6-201ENST00000288840 DAXXQ9UER7 740 aaPredicted RBP21.32■■□□□ 1
SMAD6-201ENST00000288840 MAP3K1Q13233 1512 aa21.31■■□□□ 1
SMAD6-201ENST00000288840 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
SMAD6-201ENST00000288840 PRG4Q92954 1404 aaPredicted RBP21.27■■□□□ 1
SMAD6-201ENST00000288840 PRDM2Q13029 1718 aa21.27■■□□□ 1
SMAD6-201ENST00000288840 USP47Q96K76 1375 aa21.26■□□□□ 0.99
SMAD6-201ENST00000288840 ANKRD30AQ9BXX3 1397 aa21.26■□□□□ 0.99
SMAD6-201ENST00000288840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMAD6-201ENST00000288840 EPRSP07814 1512 aaKnown RBP21.22■□□□□ 0.99
SMAD6-201ENST00000288840 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
SMAD6-201ENST00000288840 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
SMAD6-201ENST00000288840 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
SMAD6-201ENST00000288840 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
SMAD6-201ENST00000288840 WDR43Q15061 677 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMAD6-201ENST00000288840 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
SMAD6-201ENST00000288840 EHBP1L1Q8N3D4 1523 aa21.17■□□□□ 0.98
SMAD6-201ENST00000288840 PTPN23Q9H3S7 1636 aa21.17■□□□□ 0.98
SMAD6-201ENST00000288840 ZBED9Q6R2W3 1325 aa21.16■□□□□ 0.98
SMAD6-201ENST00000288840 NUDCQ9Y266 331 aa21.16■□□□□ 0.98
SMAD6-201ENST00000288840 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
SMAD6-201ENST00000288840 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
SMAD6-201ENST00000288840 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
SMAD6-201ENST00000288840 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
SMAD6-201ENST00000288840 SUPT6HQ7KZ85 1726 aaKnown RBP21.15■□□□□ 0.98
SMAD6-201ENST00000288840 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
SMAD6-201ENST00000288840 PLIN1O60240 522 aa21.14■□□□□ 0.97
SMAD6-201ENST00000288840 NEUROD2Q15784 382 aa21.13■□□□□ 0.97
SMAD6-201ENST00000288840 KNSTRNQ9Y448 316 aa21.12■□□□□ 0.97
SMAD6-201ENST00000288840 DAPK1P53355 1430 aa21.12■□□□□ 0.97
SMAD6-201ENST00000288840 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
SMAD6-201ENST00000288840 CUL7Q14999 1698 aa21.11■□□□□ 0.97
SMAD6-201ENST00000288840 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
SMAD6-201ENST00000288840 AKNAQ7Z591 1439 aa21.09■□□□□ 0.97
SMAD6-201ENST00000288840 ANKRD50Q9ULJ7 1429 aa21.09■□□□□ 0.97
SMAD6-201ENST00000288840 ABCC5O15440 1437 aa21.09■□□□□ 0.97
SMAD6-201ENST00000288840 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
SMAD6-201ENST00000288840 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.97
SMAD6-201ENST00000288840 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.97
SMAD6-201ENST00000288840 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.96
SMAD6-201ENST00000288840 RCAN3Q9UKA8 241 aa21.07■□□□□ 0.96
SMAD6-201ENST00000288840 EXOC6Q8TAG9 804 aa21.06■□□□□ 0.96
SMAD6-201ENST00000288840 PANK3Q9H999 370 aa21.06■□□□□ 0.96
SMAD6-201ENST00000288840 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
SMAD6-201ENST00000288840 MIA2Q96PC5 1412 aa21.06■□□□□ 0.96
SMAD6-201ENST00000288840 MSH5O43196 834 aa21.05■□□□□ 0.96
SMAD6-201ENST00000288840 TMF1P82094 1093 aa21.05■□□□□ 0.96
SMAD6-201ENST00000288840 IQGAP2Q13576 1575 aa21.04■□□□□ 0.96
SMAD6-201ENST00000288840 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
SMAD6-201ENST00000288840 CFAP43Q8NDM7 1665 aa21.04■□□□□ 0.96
SMAD6-201ENST00000288840 CDCA7LQ96GN5 454 aa21.02■□□□□ 0.96
SMAD6-201ENST00000288840 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.96
SMAD6-201ENST00000288840 PTPRGP23470 1445 aa21.01■□□□□ 0.95
SMAD6-201ENST00000288840 RGS3P49796 1198 aa21.01■□□□□ 0.95
SMAD6-201ENST00000288840 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
SMAD6-201ENST00000288840 CCDC146Q8IYE0 955 aa21■□□□□ 0.95
SMAD6-201ENST00000288840 MRC2Q9UBG0 1479 aa21■□□□□ 0.95
SMAD6-201ENST00000288840 MAGI3Q5TCQ9 1506 aa20.99■□□□□ 0.95
SMAD6-201ENST00000288840 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
SMAD6-201ENST00000288840 RALBP1Q15311 655 aa20.99■□□□□ 0.95
SMAD6-201ENST00000288840 ERICH6BQ5W0A0 696 aa20.99■□□□□ 0.95
SMAD6-201ENST00000288840 UGGT2Q9NYU1 1516 aa20.98■□□□□ 0.95
SMAD6-201ENST00000288840 MYBBP1AQ9BQG0 1328 aaKnown RBP20.98■□□□□ 0.95
SMAD6-201ENST00000288840 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
SMAD6-201ENST00000288840 CCDC144AA2RUR9 1427 aa20.97■□□□□ 0.95
SMAD6-201ENST00000288840 PNISRQ8TF01 805 aaKnown RBP20.97■□□□□ 0.95
SMAD6-201ENST00000288840 CTTNBP2Q8WZ74 1663 aa20.96■□□□□ 0.95
SMAD6-201ENST00000288840 SAFB2Q14151 953 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMAD6-201ENST00000288840 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.94
SMAD6-201ENST00000288840 NUTM2DQ5VT03 806 aaPredicted RBP20.94■□□□□ 0.94
SMAD6-201ENST00000288840 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
SMAD6-201ENST00000288840 KIF3BO15066 747 aa20.93■□□□□ 0.94
SMAD6-201ENST00000288840 KIAA0586Q9BVV6 1533 aa20.93■□□□□ 0.94
SMAD6-201ENST00000288840 SKAP1Q86WV1 359 aa20.92■□□□□ 0.94
SMAD6-201ENST00000288840 RPRD2Q5VT52 1461 aaKnown RBP20.91■□□□□ 0.94
SMAD6-201ENST00000288840 DEKP35659 375 aaKnown RBP20.91■□□□□ 0.94
SMAD6-201ENST00000288840 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
SMAD6-201ENST00000288840 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
SMAD6-201ENST00000288840 GGT6Q6P531 493 aa20.9■□□□□ 0.94
SMAD6-201ENST00000288840 ARHGEF11O15085 1522 aa20.9■□□□□ 0.94
SMAD6-201ENST00000288840 C9orf84Q5VXU9 1444 aa20.9■□□□□ 0.94
SMAD6-201ENST00000288840 RRP1P56182 461 aaKnown RBP20.9■□□□□ 0.94
SMAD6-201ENST00000288840 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
SMAD6-201ENST00000288840 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMAD6-201ENST00000288840 PAK3O75914 559 aaPredicted RBP20.89■□□□□ 0.93
SMAD6-201ENST00000288840 KDM6BO15054 1643 aa20.89■□□□□ 0.93
SMAD6-201ENST00000288840 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
SMAD6-201ENST00000288840 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
SMAD6-201ENST00000288840 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
SMAD6-201ENST00000288840 FANCIQ9NVI1 1328 aa20.87■□□□□ 0.93
SMAD6-201ENST00000288840 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
SMAD6-201ENST00000288840 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms