RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 PTPRKQ15262 1439 aa21.33■■□□□ 1.01
CACNA2D3-201ENST00000288197 NCOA2Q15596 1464 aa21.33■■□□□ 1.01
CACNA2D3-201ENST00000288197 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
CACNA2D3-201ENST00000288197 SLC4A3P48751 1232 aa21.32■■□□□ 1
CACNA2D3-201ENST00000288197 MYOM3Q5VTT5 1437 aa21.32■■□□□ 1
CACNA2D3-201ENST00000288197 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
CACNA2D3-201ENST00000288197 PCF11O94913 1555 aaKnown RBP21.31■■□□□ 1
CACNA2D3-201ENST00000288197 RCAN3Q9UKA8 241 aa21.31■■□□□ 1
CACNA2D3-201ENST00000288197 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
CACNA2D3-201ENST00000288197 NAIPQ13075 1403 aa21.3■■□□□ 1
CACNA2D3-201ENST00000288197 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
CACNA2D3-201ENST00000288197 SKAP1Q86WV1 359 aa21.29■■□□□ 1
CACNA2D3-201ENST00000288197 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
CACNA2D3-201ENST00000288197 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
CACNA2D3-201ENST00000288197 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.27■■□□□ 1
CACNA2D3-201ENST00000288197 HFM1A2PYH4 1435 aa21.27■■□□□ 1
CACNA2D3-201ENST00000288197 USP47Q96K76 1375 aa21.24■□□□□ 0.99
CACNA2D3-201ENST00000288197 NESP48681 1621 aa21.24■□□□□ 0.99
CACNA2D3-201ENST00000288197 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
CACNA2D3-201ENST00000288197 NUP155O75694 1391 aa21.23■□□□□ 0.99
CACNA2D3-201ENST00000288197 FYCO1Q9BQS8 1478 aa21.21■□□□□ 0.99
CACNA2D3-201ENST00000288197 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CACNA2D3-201ENST00000288197 CDCA7LQ96GN5 454 aa21.21■□□□□ 0.99
CACNA2D3-201ENST00000288197 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
CACNA2D3-201ENST00000288197 PDE4AP27815 886 aa21.19■□□□□ 0.98
CACNA2D3-201ENST00000288197 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
CACNA2D3-201ENST00000288197 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
CACNA2D3-201ENST00000288197 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
CACNA2D3-201ENST00000288197 CHGAP10645 457 aaKnown RBP21.16■□□□□ 0.98
CACNA2D3-201ENST00000288197 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
CACNA2D3-201ENST00000288197 IL27Q8NEV9 243 aa21.14■□□□□ 0.97
CACNA2D3-201ENST00000288197 ROCK2O75116 1388 aaKnown RBP21.13■□□□□ 0.97
CACNA2D3-201ENST00000288197 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
CACNA2D3-201ENST00000288197 CRBNQ96SW2 442 aa21.11■□□□□ 0.97
CACNA2D3-201ENST00000288197 KNSTRNQ9Y448 316 aa21.11■□□□□ 0.97
CACNA2D3-201ENST00000288197 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
CACNA2D3-201ENST00000288197 TCERG1O14776 1098 aaKnown RBP21.1■□□□□ 0.97
CACNA2D3-201ENST00000288197 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
CACNA2D3-201ENST00000288197 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
CACNA2D3-201ENST00000288197 PPM1GO15355 546 aaPredicted RBP21.08■□□□□ 0.97
CACNA2D3-201ENST00000288197 CCDC146Q8IYE0 955 aa21.08■□□□□ 0.97
CACNA2D3-201ENST00000288197 FRAT1Q92837 279 aaPredicted RBP21.08■□□□□ 0.96
CACNA2D3-201ENST00000288197 NLRP13Q86W25 1043 aa21.07■□□□□ 0.96
CACNA2D3-201ENST00000288197 KTN1Q86UP2 1357 aaKnown RBP21.07■□□□□ 0.96
CACNA2D3-201ENST00000288197 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
CACNA2D3-201ENST00000288197 MYBBP1AQ9BQG0 1328 aaKnown RBP21.06■□□□□ 0.96
CACNA2D3-201ENST00000288197 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.05■□□□□ 0.96
CACNA2D3-201ENST00000288197 DDRGK1Q96HY6 314 aa21.05■□□□□ 0.96
CACNA2D3-201ENST00000288197 RALBP1Q15311 655 aa21.05■□□□□ 0.96
CACNA2D3-201ENST00000288197 PANK3Q9H999 370 aa21.05■□□□□ 0.96
CACNA2D3-201ENST00000288197 MAP3K1Q13233 1512 aa21.04■□□□□ 0.96
CACNA2D3-201ENST00000288197 SPRYD3Q8NCJ5 442 aa21.04■□□□□ 0.96
CACNA2D3-201ENST00000288197 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
CACNA2D3-201ENST00000288197 CDK13Q14004 1512 aaKnown RBP21.02■□□□□ 0.96
CACNA2D3-201ENST00000288197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.96
CACNA2D3-201ENST00000288197 PTPN23Q9H3S7 1636 aa21.02■□□□□ 0.96
CACNA2D3-201ENST00000288197 KIF15Q9NS87 1388 aa21.01■□□□□ 0.95
CACNA2D3-201ENST00000288197 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
CACNA2D3-201ENST00000288197 TOPBP1Q92547 1522 aa21■□□□□ 0.95
CACNA2D3-201ENST00000288197 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
CACNA2D3-201ENST00000288197 SLKQ9H2G2 1235 aaPredicted RBP20.99■□□□□ 0.95
CACNA2D3-201ENST00000288197 NCOA1Q15788 1441 aa20.98■□□□□ 0.95
CACNA2D3-201ENST00000288197 TMF1P82094 1093 aa20.98■□□□□ 0.95
CACNA2D3-201ENST00000288197 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
CACNA2D3-201ENST00000288197 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
CACNA2D3-201ENST00000288197 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
CACNA2D3-201ENST00000288197 BRPF3Q9ULD4 1205 aa20.92■□□□□ 0.94
CACNA2D3-201ENST00000288197 C20orf194Q5TEA3 1177 aa20.91■□□□□ 0.94
CACNA2D3-201ENST00000288197 UPF2Q9HAU5 1272 aaKnown RBP20.91■□□□□ 0.94
CACNA2D3-201ENST00000288197 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.94
CACNA2D3-201ENST00000288197 ADAMTS8Q9UP79 889 aa20.89■□□□□ 0.94
CACNA2D3-201ENST00000288197 CLUAP1Q96AJ1 413 aa20.88■□□□□ 0.93
CACNA2D3-201ENST00000288197 BACH2Q9BYV9 841 aa20.88■□□□□ 0.93
CACNA2D3-201ENST00000288197 BCL2L13Q9BXK5 485 aa20.87■□□□□ 0.93
CACNA2D3-201ENST00000288197 RRP7AQ9Y3A4 280 aaKnown RBP20.86■□□□□ 0.93
CACNA2D3-201ENST00000288197 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
CACNA2D3-201ENST00000288197 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
CACNA2D3-201ENST00000288197 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
CACNA2D3-201ENST00000288197 DAPK1P53355 1430 aa20.86■□□□□ 0.93
CACNA2D3-201ENST00000288197 GOLGA2Q08379 1002 aa20.85■□□□□ 0.93
CACNA2D3-201ENST00000288197 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
CACNA2D3-201ENST00000288197 GZF1Q9H116 711 aaPredicted RBP20.85■□□□□ 0.93
CACNA2D3-201ENST00000288197 SUPT6HQ7KZ85 1726 aaKnown RBP20.84■□□□□ 0.93
CACNA2D3-201ENST00000288197 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
CACNA2D3-201ENST00000288197 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
CACNA2D3-201ENST00000288197 APAF1O14727 1248 aa20.84■□□□□ 0.93
CACNA2D3-201ENST00000288197 NFKBIBQ15653 356 aa20.83■□□□□ 0.93
CACNA2D3-201ENST00000288197 PRDM2Q13029 1718 aa20.83■□□□□ 0.93
CACNA2D3-201ENST00000288197 ABCC5O15440 1437 aa20.82■□□□□ 0.92
CACNA2D3-201ENST00000288197 GSE1Q14687 1217 aa20.81■□□□□ 0.92
CACNA2D3-201ENST00000288197 RPRD2Q5VT52 1461 aaKnown RBP20.8■□□□□ 0.92
CACNA2D3-201ENST00000288197 HSP90AA1P07900 732 aaKnown RBP20.8■□□□□ 0.92
CACNA2D3-201ENST00000288197 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
CACNA2D3-201ENST00000288197 BRD4O60885 1362 aaPredicted RBP20.79■□□□□ 0.92
CACNA2D3-201ENST00000288197 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
CACNA2D3-201ENST00000288197 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
CACNA2D3-201ENST00000288197 BECN1Q14457 450 aa20.77■□□□□ 0.92
CACNA2D3-201ENST00000288197 FRAT2O75474 233 aaPredicted RBP20.77■□□□□ 0.92
CACNA2D3-201ENST00000288197 CCDC144AA2RUR9 1427 aa20.77■□□□□ 0.92
CACNA2D3-201ENST00000288197 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms