RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
CACNA2D3-201ENST00000288197 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
CACNA2D3-201ENST00000288197 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
CACNA2D3-201ENST00000288197 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
CACNA2D3-201ENST00000288197 PCGF6Q9BYE7 350 aa26.68■■□□□ 1.86
CACNA2D3-201ENST00000288197 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
CACNA2D3-201ENST00000288197 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
CACNA2D3-201ENST00000288197 HRCP23327 699 aa26.15■■□□□ 1.78
CACNA2D3-201ENST00000288197 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
CACNA2D3-201ENST00000288197 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
CACNA2D3-201ENST00000288197 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
CACNA2D3-201ENST00000288197 TTBK1Q5TCY1 1321 aaPredicted RBP25.54■■□□□ 1.68
CACNA2D3-201ENST00000288197 MYO15BQ96JP2 1530 aa25.51■■□□□ 1.67
CACNA2D3-201ENST00000288197 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
CACNA2D3-201ENST00000288197 TRIM26Q12899 539 aaPredicted RBP25.37■■□□□ 1.65
CACNA2D3-201ENST00000288197 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
CACNA2D3-201ENST00000288197 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
CACNA2D3-201ENST00000288197 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
CACNA2D3-201ENST00000288197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.88■■□□□ 1.57
CACNA2D3-201ENST00000288197 YTHDC1Q96MU7 727 aaKnown RBP24.75■■□□□ 1.55
CACNA2D3-201ENST00000288197 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
CACNA2D3-201ENST00000288197 DCAF1Q9Y4B6 1507 aa24.65■■□□□ 1.54
CACNA2D3-201ENST00000288197 PELP1Q8IZL8 1130 aaKnown RBP24.58■■□□□ 1.52
CACNA2D3-201ENST00000288197 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
CACNA2D3-201ENST00000288197 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
CACNA2D3-201ENST00000288197 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
CACNA2D3-201ENST00000288197 DIEXFQ68CQ4 756 aaKnown RBP24.41■■□□□ 1.5
CACNA2D3-201ENST00000288197 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
CACNA2D3-201ENST00000288197 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
CACNA2D3-201ENST00000288197 APLP2Q06481 763 aa24.28■■□□□ 1.48
CACNA2D3-201ENST00000288197 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
CACNA2D3-201ENST00000288197 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
CACNA2D3-201ENST00000288197 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
CACNA2D3-201ENST00000288197 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
CACNA2D3-201ENST00000288197 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.45
CACNA2D3-201ENST00000288197 ABCC9O60706 1549 aa24.07■■□□□ 1.44
CACNA2D3-201ENST00000288197 ITGAEP38570 1179 aa23.9■■□□□ 1.42
CACNA2D3-201ENST00000288197 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
CACNA2D3-201ENST00000288197 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
CACNA2D3-201ENST00000288197 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
CACNA2D3-201ENST00000288197 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
CACNA2D3-201ENST00000288197 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
CACNA2D3-201ENST00000288197 CSRNP3Q8WYN3 585 aa23.7■■□□□ 1.38
CACNA2D3-201ENST00000288197 MIER1Q8N108 512 aa23.69■■□□□ 1.38
CACNA2D3-201ENST00000288197 BCANQ96GW7 911 aa23.54■■□□□ 1.36
CACNA2D3-201ENST00000288197 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
CACNA2D3-201ENST00000288197 MYT1Q01538 1121 aa23.44■■□□□ 1.34
CACNA2D3-201ENST00000288197 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
CACNA2D3-201ENST00000288197 SOGA1O94964 1423 aa23.38■■□□□ 1.33
CACNA2D3-201ENST00000288197 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
CACNA2D3-201ENST00000288197 CCDC88BA6NC98 1476 aa23.29■■□□□ 1.32
CACNA2D3-201ENST00000288197 NEFLP07196 543 aa23.23■■□□□ 1.31
CACNA2D3-201ENST00000288197 WIZO95785 1651 aa23.21■■□□□ 1.31
CACNA2D3-201ENST00000288197 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
CACNA2D3-201ENST00000288197 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
CACNA2D3-201ENST00000288197 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.3
CACNA2D3-201ENST00000288197 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.3
CACNA2D3-201ENST00000288197 CLIP1P30622 1438 aa23.12■■□□□ 1.29
CACNA2D3-201ENST00000288197 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
CACNA2D3-201ENST00000288197 P3H3Q8IVL6 736 aa23.1■■□□□ 1.29
CACNA2D3-201ENST00000288197 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
CACNA2D3-201ENST00000288197 ERICH6Q7L0X2 663 aa23.02■■□□□ 1.28
CACNA2D3-201ENST00000288197 FKBP8Q14318 412 aa23.01■■□□□ 1.27
CACNA2D3-201ENST00000288197 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
CACNA2D3-201ENST00000288197 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
CACNA2D3-201ENST00000288197 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
CACNA2D3-201ENST00000288197 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
CACNA2D3-201ENST00000288197 KANK4Q5T7N3 995 aaPredicted RBP22.88■■□□□ 1.25
CACNA2D3-201ENST00000288197 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
CACNA2D3-201ENST00000288197 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
CACNA2D3-201ENST00000288197 NACADO15069 1562 aa22.86■■□□□ 1.25
CACNA2D3-201ENST00000288197 POLR3GLQ9BT43 218 aa22.85■■□□□ 1.25
CACNA2D3-201ENST00000288197 EEA1Q15075 1411 aa22.8■■□□□ 1.24
CACNA2D3-201ENST00000288197 IRX6P78412 446 aaPredicted RBP22.79■■□□□ 1.24
CACNA2D3-201ENST00000288197 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
CACNA2D3-201ENST00000288197 ANP32CO43423 234 aa22.78■■□□□ 1.24
CACNA2D3-201ENST00000288197 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
CACNA2D3-201ENST00000288197 ARID3CA6NKF2 412 aa22.69■■□□□ 1.22
CACNA2D3-201ENST00000288197 VPS8Q8N3P4 1428 aa22.68■■□□□ 1.22
CACNA2D3-201ENST00000288197 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
CACNA2D3-201ENST00000288197 TSHZ2Q9NRE2 1034 aa22.62■■□□□ 1.21
CACNA2D3-201ENST00000288197 HNRNPUQ00839 825 aaKnown RBP eCLIP22.61■■□□□ 1.21
CACNA2D3-201ENST00000288197 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
CACNA2D3-201ENST00000288197 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
CACNA2D3-201ENST00000288197 DHX57Q6P158 1386 aaKnown RBP22.55■■□□□ 1.2
CACNA2D3-201ENST00000288197 ANP32EQ9BTT0 268 aa22.53■■□□□ 1.2
CACNA2D3-201ENST00000288197 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
CACNA2D3-201ENST00000288197 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
CACNA2D3-201ENST00000288197 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
CACNA2D3-201ENST00000288197 CDK11AQ9UQ88 783 aaPredicted RBP22.48■■□□□ 1.19
CACNA2D3-201ENST00000288197 CCNB3Q8WWL7 1395 aa22.47■■□□□ 1.19
CACNA2D3-201ENST00000288197 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
CACNA2D3-201ENST00000288197 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
CACNA2D3-201ENST00000288197 TONSLQ96HA7 1378 aa22.46■■□□□ 1.19
CACNA2D3-201ENST00000288197 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
CACNA2D3-201ENST00000288197 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
CACNA2D3-201ENST00000288197 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
CACNA2D3-201ENST00000288197 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
CACNA2D3-201ENST00000288197 RRP7BPQ9NSQ0 103 aa22.33■■□□□ 1.17
CACNA2D3-201ENST00000288197 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms