RNA–Protein interactions for RNA: ENST00000287844.6

ABCF2-202, Transcript of ATP binding cassette subfamily F member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCF2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-202ENST00000287844 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
ABCF2-202ENST00000287844 PDE4CQ08493 712 aa11.6□□□□□ -0.55
ABCF2-202ENST00000287844 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
ABCF2-202ENST00000287844 PRXQ9BXM0 1461 aa11.59□□□□□ -0.55
ABCF2-202ENST00000287844 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
ABCF2-202ENST00000287844 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
ABCF2-202ENST00000287844 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
ABCF2-202ENST00000287844 BACH2Q9BYV9 841 aa11.58□□□□□ -0.56
ABCF2-202ENST00000287844 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
ABCF2-202ENST00000287844 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
ABCF2-202ENST00000287844 AKNAQ7Z591 1439 aa11.57□□□□□ -0.56
ABCF2-202ENST00000287844 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
ABCF2-202ENST00000287844 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
ABCF2-202ENST00000287844 RNF123Q5XPI4 1314 aa11.54□□□□□ -0.56
ABCF2-202ENST00000287844 SMG6Q86US8 1419 aaKnown RBP11.53□□□□□ -0.56
ABCF2-202ENST00000287844 MS4A1P11836 297 aa11.53□□□□□ -0.56
ABCF2-202ENST00000287844 MRS2Q9HD23 443 aa11.52□□□□□ -0.56
ABCF2-202ENST00000287844 FRAT2O75474 233 aaPredicted RBP11.52□□□□□ -0.57
ABCF2-202ENST00000287844 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
ABCF2-202ENST00000287844 ARAP1Q96P48 1450 aa11.52□□□□□ -0.57
ABCF2-202ENST00000287844 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
ABCF2-202ENST00000287844 SETD5Q9C0A6 1442 aa11.51□□□□□ -0.57
ABCF2-202ENST00000287844 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
ABCF2-202ENST00000287844 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
ABCF2-202ENST00000287844 CLCN1P35523 988 aa11.49□□□□□ -0.57
ABCF2-202ENST00000287844 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
ABCF2-202ENST00000287844 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
ABCF2-202ENST00000287844 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
ABCF2-202ENST00000287844 PRDM4Q9UKN5 801 aa11.48□□□□□ -0.57
ABCF2-202ENST00000287844 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
ABCF2-202ENST00000287844 TONSLQ96HA7 1378 aa11.47□□□□□ -0.57
ABCF2-202ENST00000287844 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.58
ABCF2-202ENST00000287844 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.58
ABCF2-202ENST00000287844 CENPJQ9HC77 1338 aaPredicted RBP11.45□□□□□ -0.58
ABCF2-202ENST00000287844 RGS3P49796 1198 aa11.45□□□□□ -0.58
ABCF2-202ENST00000287844 PDCL3Q9H2J4 239 aa11.45□□□□□ -0.58
ABCF2-202ENST00000287844 CHIC2Q9UKJ5 165 aa11.45□□□□□ -0.58
ABCF2-202ENST00000287844 POGKQ9P215 609 aa11.43□□□□□ -0.58
ABCF2-202ENST00000287844 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
ABCF2-202ENST00000287844 CNTLNQ9NXG0 1405 aa11.42□□□□□ -0.58
ABCF2-202ENST00000287844 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
ABCF2-202ENST00000287844 EXOC6Q8TAG9 804 aa11.42□□□□□ -0.58
ABCF2-202ENST00000287844 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
ABCF2-202ENST00000287844 IGF1RP08069 1367 aa11.41□□□□□ -0.58
ABCF2-202ENST00000287844 ARID4BQ4LE39 1312 aaPredicted RBP11.41□□□□□ -0.58
ABCF2-202ENST00000287844 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
ABCF2-202ENST00000287844 TPM2P07951 284 aa11.39□□□□□ -0.59
ABCF2-202ENST00000287844 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
ABCF2-202ENST00000287844 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
ABCF2-202ENST00000287844 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
ABCF2-202ENST00000287844 RRP1P56182 461 aaKnown RBP11.37□□□□□ -0.59
ABCF2-202ENST00000287844 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
ABCF2-202ENST00000287844 ARID3AQ99856 593 aa11.36□□□□□ -0.59
ABCF2-202ENST00000287844 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
ABCF2-202ENST00000287844 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
ABCF2-202ENST00000287844 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
ABCF2-202ENST00000287844 NESP48681 1621 aa11.35□□□□□ -0.59
ABCF2-202ENST00000287844 CARMIL1Q5VZK9 1371 aa11.34□□□□□ -0.59
ABCF2-202ENST00000287844 GOLGA6L3A6NEY3 463 aa11.34□□□□□ -0.59
ABCF2-202ENST00000287844 SKAP1Q86WV1 359 aa11.34□□□□□ -0.59
ABCF2-202ENST00000287844 PKD2Q13563 968 aa11.34□□□□□ -0.59
ABCF2-202ENST00000287844 FOXD1Q16676 465 aa11.33□□□□□ -0.6
ABCF2-202ENST00000287844 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
ABCF2-202ENST00000287844 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
ABCF2-202ENST00000287844 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
ABCF2-202ENST00000287844 EIF4G2P78344 907 aaKnown RBP eCLIP11.32□□□□□ -0.6
ABCF2-202ENST00000287844 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
ABCF2-202ENST00000287844 ESPNB1AK53 854 aa11.31□□□□□ -0.6
ABCF2-202ENST00000287844 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
ABCF2-202ENST00000287844 RRP7BPQ9NSQ0 103 aa11.31□□□□□ -0.6
ABCF2-202ENST00000287844 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
ABCF2-202ENST00000287844 FSD2A1L4K1 749 aa11.29□□□□□ -0.6
ABCF2-202ENST00000287844 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
ABCF2-202ENST00000287844 CCDC7Q96M83 1385 aa11.29□□□□□ -0.6
ABCF2-202ENST00000287844 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
ABCF2-202ENST00000287844 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
ABCF2-202ENST00000287844 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
ABCF2-202ENST00000287844 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
ABCF2-202ENST00000287844 MAP3K1Q13233 1512 aa11.27□□□□□ -0.61
ABCF2-202ENST00000287844 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
ABCF2-202ENST00000287844 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.61
ABCF2-202ENST00000287844 KIAA1211Q6ZU35 1233 aa11.27□□□□□ -0.61
ABCF2-202ENST00000287844 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
ABCF2-202ENST00000287844 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
ABCF2-202ENST00000287844 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
ABCF2-202ENST00000287844 ZHX1Q9UKY1 873 aaPredicted RBP11.26□□□□□ -0.61
ABCF2-202ENST00000287844 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
ABCF2-202ENST00000287844 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
ABCF2-202ENST00000287844 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
ABCF2-202ENST00000287844 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
ABCF2-202ENST00000287844 MYH16Q9H6N6 1097 aa11.25□□□□□ -0.61
ABCF2-202ENST00000287844 CUL7Q14999 1698 aa11.25□□□□□ -0.61
ABCF2-202ENST00000287844 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
ABCF2-202ENST00000287844 PCF11O94913 1555 aaKnown RBP11.25□□□□□ -0.61
ABCF2-202ENST00000287844 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
ABCF2-202ENST00000287844 MRE11P49959 708 aa11.24□□□□□ -0.61
ABCF2-202ENST00000287844 KDM5BQ9UGL1 1544 aa11.24□□□□□ -0.61
ABCF2-202ENST00000287844 TRIM44Q96DX7 344 aaPredicted RBP11.24□□□□□ -0.61
ABCF2-202ENST00000287844 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
ABCF2-202ENST00000287844 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms