RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 CHD1O14646 1710 aa9.57□□□□□ -0.88
VPS8-201ENST00000287546 NUP160Q12769 1436 aa9.57□□□□□ -0.88
VPS8-201ENST00000287546 SIN3AQ96ST3 1273 aa9.56□□□□□ -0.88
VPS8-201ENST00000287546 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
VPS8-201ENST00000287546 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
VPS8-201ENST00000287546 MYT1Q01538 1121 aa9.55□□□□□ -0.88
VPS8-201ENST00000287546 MIER1Q8N108 512 aa9.55□□□□□ -0.88
VPS8-201ENST00000287546 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
VPS8-201ENST00000287546 TROQ12816 1431 aaPredicted RBP9.54□□□□□ -0.88
VPS8-201ENST00000287546 DDX10Q13206 875 aaKnown RBP9.53□□□□□ -0.88
VPS8-201ENST00000287546 PPP1R15AO75807 674 aaPredicted RBP9.52□□□□□ -0.89
VPS8-201ENST00000287546 ZNF326Q5BKZ1 582 aaKnown RBP9.52□□□□□ -0.89
VPS8-201ENST00000287546 PTPN23Q9H3S7 1636 aa9.52□□□□□ -0.89
VPS8-201ENST00000287546 MPHOSPH9Q99550 1183 aa9.52□□□□□ -0.89
VPS8-201ENST00000287546 PLB1Q6P1J6 1458 aa9.52□□□□□ -0.89
VPS8-201ENST00000287546 GTF3C3Q9Y5Q9 886 aa9.51□□□□□ -0.89
VPS8-201ENST00000287546 KIAA0556O60303 1618 aa9.5□□□□□ -0.89
VPS8-201ENST00000287546 HAP1P54257 671 aaPredicted RBP9.5□□□□□ -0.89
VPS8-201ENST00000287546 DISP1Q96F81 1524 aa9.5□□□□□ -0.89
VPS8-201ENST00000287546 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
VPS8-201ENST00000287546 CDK13Q14004 1512 aaKnown RBP9.5□□□□□ -0.89
VPS8-201ENST00000287546 AKNAQ7Z591 1439 aa9.5□□□□□ -0.89
VPS8-201ENST00000287546 DCAF8L1A6NGE4 600 aa9.49□□□□□ -0.89
VPS8-201ENST00000287546 ERCC6L2Q5T890 1561 aa9.49□□□□□ -0.89
VPS8-201ENST00000287546 ROCK1Q13464 1354 aa9.49□□□□□ -0.89
VPS8-201ENST00000287546 EFCAB2Q5VUJ9 269 aa9.48□□□□□ -0.89
VPS8-201ENST00000287546 NAIPQ13075 1403 aa9.47□□□□□ -0.89
VPS8-201ENST00000287546 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
VPS8-201ENST00000287546 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
VPS8-201ENST00000287546 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
VPS8-201ENST00000287546 DAPK1P53355 1430 aa9.45□□□□□ -0.9
VPS8-201ENST00000287546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS8-201ENST00000287546 TCOF1Q13428 1488 aaKnown RBP9.45□□□□□ -0.9
VPS8-201ENST00000287546 ITSN2Q9NZM3 1697 aa9.45□□□□□ -0.9
VPS8-201ENST00000287546 KIF14Q15058 1648 aa9.45□□□□□ -0.9
VPS8-201ENST00000287546 NUP155O75694 1391 aa9.44□□□□□ -0.9
VPS8-201ENST00000287546 PLEKHH2Q8IVE3 1493 aa9.44□□□□□ -0.9
VPS8-201ENST00000287546 PKD2Q13563 968 aa9.43□□□□□ -0.9
VPS8-201ENST00000287546 NUP153P49790 1475 aaKnown RBP9.43□□□□□ -0.9
VPS8-201ENST00000287546 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
VPS8-201ENST00000287546 KANK1Q14678 1352 aa9.41□□□□□ -0.9
VPS8-201ENST00000287546 ANKRD50Q9ULJ7 1429 aa9.41□□□□□ -0.9
VPS8-201ENST00000287546 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS8-201ENST00000287546 CAMSAP2Q08AD1 1489 aa9.4□□□□□ -0.9
VPS8-201ENST00000287546 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
VPS8-201ENST00000287546 CLASP1Q7Z460 1538 aa9.4□□□□□ -0.9
VPS8-201ENST00000287546 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.91
VPS8-201ENST00000287546 L3MBTL2Q969R5 705 aa9.39□□□□□ -0.91
VPS8-201ENST00000287546 KIF15Q9NS87 1388 aa9.39□□□□□ -0.91
VPS8-201ENST00000287546 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
VPS8-201ENST00000287546 ABCC5O15440 1437 aa9.39□□□□□ -0.91
VPS8-201ENST00000287546 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
VPS8-201ENST00000287546 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
VPS8-201ENST00000287546 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
VPS8-201ENST00000287546 HSPA5P11021 654 aaKnown RBP9.38□□□□□ -0.91
VPS8-201ENST00000287546 CARD11Q9BXL7 1154 aa9.38□□□□□ -0.91
VPS8-201ENST00000287546 MAPKBP1O60336 1514 aa9.38□□□□□ -0.91
VPS8-201ENST00000287546 CDK11BP21127 795 aaKnown RBP9.37□□□□□ -0.91
VPS8-201ENST00000287546 ATP10BO94823 1461 aa9.37□□□□□ -0.91
VPS8-201ENST00000287546 SPAG9O60271 1321 aaKnown RBP9.37□□□□□ -0.91
VPS8-201ENST00000287546 FOXD1Q16676 465 aa9.36□□□□□ -0.91
VPS8-201ENST00000287546 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
VPS8-201ENST00000287546 CCDC141Q6ZP82 1450 aa9.35□□□□□ -0.91
VPS8-201ENST00000287546 KIAA1107Q9UPP5 1409 aa9.35□□□□□ -0.91
VPS8-201ENST00000287546 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
VPS8-201ENST00000287546 DNMT1P26358 1616 aaKnown RBP9.34□□□□□ -0.91
VPS8-201ENST00000287546 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
VPS8-201ENST00000287546 NPHP1O15259 732 aa9.34□□□□□ -0.91
VPS8-201ENST00000287546 HNRNPUQ00839 825 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS8-201ENST00000287546 CCDC144AA2RUR9 1427 aa9.34□□□□□ -0.91
VPS8-201ENST00000287546 NCOA1Q15788 1441 aa9.34□□□□□ -0.91
VPS8-201ENST00000287546 FAM69CQ0P6D2 419 aa9.33□□□□□ -0.92
VPS8-201ENST00000287546 DCAF11Q8TEB1 546 aa9.33□□□□□ -0.92
VPS8-201ENST00000287546 MRS2Q9HD23 443 aa9.33□□□□□ -0.92
VPS8-201ENST00000287546 ARID4BQ4LE39 1312 aaPredicted RBP9.33□□□□□ -0.92
VPS8-201ENST00000287546 ROCK2O75116 1388 aaKnown RBP9.33□□□□□ -0.92
VPS8-201ENST00000287546 GCC2Q8IWJ2 1684 aa9.33□□□□□ -0.92
VPS8-201ENST00000287546 CHGAP10645 457 aaKnown RBP9.32□□□□□ -0.92
VPS8-201ENST00000287546 BCL11AQ9H165 835 aa9.32□□□□□ -0.92
VPS8-201ENST00000287546 SHANK2Q9UPX8 1470 aa9.32□□□□□ -0.92
VPS8-201ENST00000287546 MAGI3Q5TCQ9 1506 aa9.32□□□□□ -0.92
VPS8-201ENST00000287546 RGL3Q3MIN7 710 aa9.32□□□□□ -0.92
VPS8-201ENST00000287546 SHROOM2Q13796 1616 aa9.32□□□□□ -0.92
VPS8-201ENST00000287546 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
VPS8-201ENST00000287546 ABCC2Q92887 1545 aa9.31□□□□□ -0.92
VPS8-201ENST00000287546 STAC3Q96MF2 364 aa9.31□□□□□ -0.92
VPS8-201ENST00000287546 TMC1Q8TDI8 760 aa9.31□□□□□ -0.92
VPS8-201ENST00000287546 DNAJC5Q9H3Z4 198 aa9.3□□□□□ -0.92
VPS8-201ENST00000287546 ABCA8O94911 1581 aa9.3□□□□□ -0.92
VPS8-201ENST00000287546 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
VPS8-201ENST00000287546 ASXL2Q76L83 1435 aa9.29□□□□□ -0.92
VPS8-201ENST00000287546 ADGRL2O95490 1459 aa9.29□□□□□ -0.92
VPS8-201ENST00000287546 RPRD2Q5VT52 1461 aaKnown RBP9.29□□□□□ -0.92
VPS8-201ENST00000287546 FAM9BQ8IZU0 186 aa9.28□□□□□ -0.92
VPS8-201ENST00000287546 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
VPS8-201ENST00000287546 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
VPS8-201ENST00000287546 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
VPS8-201ENST00000287546 ADGBQ8N7X0 1667 aa9.27□□□□□ -0.92
VPS8-201ENST00000287546 TMF1P82094 1093 aa9.27□□□□□ -0.93
VPS8-201ENST00000287546 USP47Q96K76 1375 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms