RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SOX12O15370 315 aa14.67□□□□□ -0.06
USP6NL-201ENST00000277575 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
USP6NL-201ENST00000277575 CCDC18Q5T9S5 1454 aa14.66□□□□□ -0.06
USP6NL-201ENST00000277575 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
USP6NL-201ENST00000277575 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
USP6NL-201ENST00000277575 L3MBTL2Q969R5 705 aa14.65□□□□□ -0.06
USP6NL-201ENST00000277575 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
USP6NL-201ENST00000277575 BECN1Q14457 450 aa14.63□□□□□ -0.07
USP6NL-201ENST00000277575 ROCK2O75116 1388 aaKnown RBP14.63□□□□□ -0.07
USP6NL-201ENST00000277575 RGS3P49796 1198 aa14.6□□□□□ -0.07
USP6NL-201ENST00000277575 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
USP6NL-201ENST00000277575 MS4A1P11836 297 aa14.6□□□□□ -0.07
USP6NL-201ENST00000277575 DDRGK1Q96HY6 314 aa14.6□□□□□ -0.07
USP6NL-201ENST00000277575 PTPRGP23470 1445 aa14.6□□□□□ -0.07
USP6NL-201ENST00000277575 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
USP6NL-201ENST00000277575 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
USP6NL-201ENST00000277575 IGF1RP08069 1367 aa14.59□□□□□ -0.07
USP6NL-201ENST00000277575 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
USP6NL-201ENST00000277575 B4GALNT3Q6L9W6 998 aa14.56□□□□□ -0.08
USP6NL-201ENST00000277575 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
USP6NL-201ENST00000277575 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
USP6NL-201ENST00000277575 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
USP6NL-201ENST00000277575 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
USP6NL-201ENST00000277575 U2AF1L5P0DN76 240 aaPredicted RBP14.54□□□□□ -0.08
USP6NL-201ENST00000277575 U2AF1Q01081 240 aaKnown RBP eCLIP14.54□□□□□ -0.08
USP6NL-201ENST00000277575 RALBP1Q15311 655 aa14.54□□□□□ -0.08
USP6NL-201ENST00000277575 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
USP6NL-201ENST00000277575 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.08
USP6NL-201ENST00000277575 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
USP6NL-201ENST00000277575 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
USP6NL-201ENST00000277575 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
USP6NL-201ENST00000277575 EIF5BO60841 1220 aaKnown RBP14.51□□□□□ -0.09
USP6NL-201ENST00000277575 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
USP6NL-201ENST00000277575 EIF3AQ14152 1382 aaKnown RBP14.5□□□□□ -0.09
USP6NL-201ENST00000277575 OS9Q13438 667 aaPredicted RBP14.5□□□□□ -0.09
USP6NL-201ENST00000277575 GOLGA6L22H0YM25 854 aa14.49□□□□□ -0.09
USP6NL-201ENST00000277575 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
USP6NL-201ENST00000277575 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
USP6NL-201ENST00000277575 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
USP6NL-201ENST00000277575 DHX57Q6P158 1386 aaKnown RBP14.48□□□□□ -0.09
USP6NL-201ENST00000277575 TRAK1Q9UPV9 953 aa14.47□□□□□ -0.09
USP6NL-201ENST00000277575 NPHP1O15259 732 aa14.46□□□□□ -0.09
USP6NL-201ENST00000277575 CCDC144AA2RUR9 1427 aa14.46□□□□□ -0.09
USP6NL-201ENST00000277575 ST20-MTHFSA0A0A6YYL1 179 aa14.46□□□□□ -0.09
USP6NL-201ENST00000277575 NLRP13Q86W25 1043 aa14.45□□□□□ -0.1
USP6NL-201ENST00000277575 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
USP6NL-201ENST00000277575 RCAN3Q9UKA8 241 aa14.44□□□□□ -0.1
USP6NL-201ENST00000277575 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.14e-7■■■■□ 26.7
USP6NL-201ENST00000277575 IPO8O15397 1037 aaKnown RBP14.43□□□□□ -0.1
USP6NL-201ENST00000277575 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
USP6NL-201ENST00000277575 NGDNQ8NEJ9 315 aaKnown RBP14.42□□□□□ -0.1
USP6NL-201ENST00000277575 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
USP6NL-201ENST00000277575 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
USP6NL-201ENST00000277575 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
USP6NL-201ENST00000277575 KCNJ4P48050 445 aa14.4□□□□□ -0.1
USP6NL-201ENST00000277575 ZNF644Q9H582 1327 aaPredicted RBP14.39□□□□□ -0.11
USP6NL-201ENST00000277575 MYOM3Q5VTT5 1437 aa14.39□□□□□ -0.11
USP6NL-201ENST00000277575 FGD1P98174 961 aa14.38□□□□□ -0.11
USP6NL-201ENST00000277575 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
USP6NL-201ENST00000277575 PANK3Q9H999 370 aa14.37□□□□□ -0.11
USP6NL-201ENST00000277575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
USP6NL-201ENST00000277575 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
USP6NL-201ENST00000277575 ERICH6BQ5W0A0 696 aa14.35□□□□□ -0.11
USP6NL-201ENST00000277575 UACAQ9BZF9 1416 aa14.35□□□□□ -0.11
USP6NL-201ENST00000277575 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
USP6NL-201ENST00000277575 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
USP6NL-201ENST00000277575 APBB1O00213 710 aa14.35□□□□□ -0.11
USP6NL-201ENST00000277575 ZRSR1Q15695 479 aaKnown RBP14.35□□□□□ -0.11
USP6NL-201ENST00000277575 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
USP6NL-201ENST00000277575 CFTRP13569 1480 aa14.34□□□□□ -0.11
USP6NL-201ENST00000277575 TRIM44Q96DX7 344 aaPredicted RBP14.34□□□□□ -0.11
USP6NL-201ENST00000277575 AMPHP49418 695 aa14.34□□□□□ -0.11
USP6NL-201ENST00000277575 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.11
USP6NL-201ENST00000277575 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.12
USP6NL-201ENST00000277575 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
USP6NL-201ENST00000277575 PHLDB1Q86UU1 1377 aa14.33□□□□□ -0.12
USP6NL-201ENST00000277575 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
USP6NL-201ENST00000277575 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
USP6NL-201ENST00000277575 STK31Q9BXU1 1019 aa14.32□□□□□ -0.12
USP6NL-201ENST00000277575 USP47Q96K76 1375 aa14.32□□□□□ -0.12
USP6NL-201ENST00000277575 SMC4Q9NTJ3 1288 aa14.32□□□□□ -0.12
USP6NL-201ENST00000277575 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
USP6NL-201ENST00000277575 RWDD1Q9H446 243 aaPredicted RBP14.31□□□□□ -0.12
USP6NL-201ENST00000277575 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
USP6NL-201ENST00000277575 TAOK2Q9UL54 1235 aa14.31□□□□□ -0.12
USP6NL-201ENST00000277575 ZNF330Q9Y3S2 320 aaPredicted RBP14.31□□□□□ -0.12
USP6NL-201ENST00000277575 LTV1Q96GA3 475 aaPredicted RBP14.31□□□□□ -0.12
USP6NL-201ENST00000277575 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
USP6NL-201ENST00000277575 MYBBP1AQ9BQG0 1328 aaKnown RBP14.31□□□□□ -0.12
USP6NL-201ENST00000277575 KIF21BO75037 1637 aa14.3□□□□□ -0.12
USP6NL-201ENST00000277575 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
USP6NL-201ENST00000277575 EVC2Q86UK5 1308 aa14.3□□□□□ -0.12
USP6NL-201ENST00000277575 NAP1L2Q9ULW6 460 aaPredicted RBP14.3□□□□□ -0.12
USP6NL-201ENST00000277575 CDK11BP21127 795 aaKnown RBP14.29□□□□□ -0.12
USP6NL-201ENST00000277575 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
USP6NL-201ENST00000277575 NESP48681 1621 aa14.29□□□□□ -0.12
USP6NL-201ENST00000277575 LMOD3Q0VAK6 560 aa14.29□□□□□ -0.12
USP6NL-201ENST00000277575 HSCBQ8IWL3 235 aa14.29□□□□□ -0.12
USP6NL-201ENST00000277575 LRRC9Q6ZRR7 1453 aa14.28□□□□□ -0.12
USP6NL-201ENST00000277575 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms