RNA–Protein interactions for RNA: ENST00000275820.3

NOM1-201, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOM1, Length 6,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-201ENST00000275820 RCAN3Q9UKA8 241 aa24.1■■□□□ 1.45
NOM1-201ENST00000275820 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
NOM1-201ENST00000275820 RALBP1Q15311 655 aa24.08■■□□□ 1.45
NOM1-201ENST00000275820 ROCK2O75116 1388 aaKnown RBP24.08■■□□□ 1.45
NOM1-201ENST00000275820 TSHZ2Q9NRE2 1034 aa24.07■■□□□ 1.44
NOM1-201ENST00000275820 SRPK2P78362 688 aaKnown RBP24.07■■□□□ 1.44
NOM1-201ENST00000275820 CDK11BP21127 795 aaKnown RBP24.05■■□□□ 1.44
NOM1-201ENST00000275820 NUP155O75694 1391 aa24.04■■□□□ 1.44
NOM1-201ENST00000275820 OS9Q13438 667 aaPredicted RBP24.03■■□□□ 1.44
NOM1-201ENST00000275820 HAP1P54257 671 aaPredicted RBP24.02■■□□□ 1.44
NOM1-201ENST00000275820 SAFB2Q14151 953 aaKnown RBP eCLIP24.02■■□□□ 1.44
NOM1-201ENST00000275820 PLCB2Q00722 1185 aa24.02■■□□□ 1.44
NOM1-201ENST00000275820 SPRYD3Q8NCJ5 442 aa24.01■■□□□ 1.43
NOM1-201ENST00000275820 L3MBTL2Q969R5 705 aa24.01■■□□□ 1.43
NOM1-201ENST00000275820 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
NOM1-201ENST00000275820 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
NOM1-201ENST00000275820 TCERG1O14776 1098 aaKnown RBP24■■□□□ 1.43
NOM1-201ENST00000275820 LMOD2Q6P5Q4 547 aa24■■□□□ 1.43
NOM1-201ENST00000275820 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
NOM1-201ENST00000275820 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
NOM1-201ENST00000275820 L1TD1Q5T7N2 865 aaKnown RBP23.97■■□□□ 1.43
NOM1-201ENST00000275820 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
NOM1-201ENST00000275820 DHX57Q6P158 1386 aaKnown RBP23.96■■□□□ 1.43
NOM1-201ENST00000275820 KCNJ4P48050 445 aa23.95■■□□□ 1.42
NOM1-201ENST00000275820 FGD1P98174 961 aa23.93■■□□□ 1.42
NOM1-201ENST00000275820 SOX12O15370 315 aa23.92■■□□□ 1.42
NOM1-201ENST00000275820 GGT6Q6P531 493 aa23.92■■□□□ 1.42
NOM1-201ENST00000275820 IPO8O15397 1037 aaKnown RBP23.92■■□□□ 1.42
NOM1-201ENST00000275820 STK26Q9P289 416 aa23.91■■□□□ 1.42
NOM1-201ENST00000275820 U2AF1L5P0DN76 240 aaPredicted RBP23.9■■□□□ 1.42
NOM1-201ENST00000275820 U2AF1Q01081 240 aaKnown RBP eCLIP23.9■■□□□ 1.42
NOM1-201ENST00000275820 RWDD1Q9H446 243 aaPredicted RBP23.89■■□□□ 1.41
NOM1-201ENST00000275820 MCCP23508 829 aa23.89■■□□□ 1.41
NOM1-201ENST00000275820 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
NOM1-201ENST00000275820 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
NOM1-201ENST00000275820 CFAP44Q96MT7 982 aa23.88■■□□□ 1.41
NOM1-201ENST00000275820 TAOK2Q9UL54 1235 aa23.87■■□□□ 1.41
NOM1-201ENST00000275820 ITPRIPQ8IWB1 547 aa23.86■■□□□ 1.41
NOM1-201ENST00000275820 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
NOM1-201ENST00000275820 NLRP13Q86W25 1043 aa23.86■■□□□ 1.41
NOM1-201ENST00000275820 IPO9Q96P70 1041 aaKnown RBP23.85■■□□□ 1.41
NOM1-201ENST00000275820 MLECQ14165 292 aa23.85■■□□□ 1.41
NOM1-201ENST00000275820 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
NOM1-201ENST00000275820 NAP1L2Q9ULW6 460 aaPredicted RBP23.84■■□□□ 1.41
NOM1-201ENST00000275820 EIF3AQ14152 1382 aaKnown RBP23.83■■□□□ 1.41
NOM1-201ENST00000275820 GOLGA6L4A6NEF3 574 aa23.83■■□□□ 1.41
NOM1-201ENST00000275820 SLKQ9H2G2 1235 aaPredicted RBP23.83■■□□□ 1.41
NOM1-201ENST00000275820 GOLGA2Q08379 1002 aa23.83■■□□□ 1.41
NOM1-201ENST00000275820 RTF1Q92541 710 aaKnown RBP23.83■■□□□ 1.41
NOM1-201ENST00000275820 GOLGA6L6A8MZA4 724 aa23.83■■□□□ 1.41
NOM1-201ENST00000275820 APBB1O00213 710 aa23.83■■□□□ 1.4
NOM1-201ENST00000275820 EFCAB2Q5VUJ9 269 aa23.82■■□□□ 1.4
NOM1-201ENST00000275820 MSNP26038 577 aaKnown RBP23.82■■□□□ 1.4
NOM1-201ENST00000275820 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
NOM1-201ENST00000275820 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
NOM1-201ENST00000275820 PMFBP1Q8TBY8 1022 aa23.8■■□□□ 1.4
NOM1-201ENST00000275820 CCDC18Q5T9S5 1454 aa23.8■■□□□ 1.4
NOM1-201ENST00000275820 CALD1Q05682 793 aaKnown RBP23.79■■□□□ 1.4
NOM1-201ENST00000275820 GBP4Q96PP9 640 aa23.78■■□□□ 1.4
NOM1-201ENST00000275820 CCDC146Q8IYE0 955 aa23.78■■□□□ 1.4
NOM1-201ENST00000275820 KIF15Q9NS87 1388 aa23.76■■□□□ 1.39
NOM1-201ENST00000275820 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
NOM1-201ENST00000275820 GZF1Q9H116 711 aaPredicted RBP23.75■■□□□ 1.39
NOM1-201ENST00000275820 NRDCO43847 1150 aa23.74■■□□□ 1.39
NOM1-201ENST00000275820 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
NOM1-201ENST00000275820 MYBBP1AQ9BQG0 1328 aaKnown RBP23.74■■□□□ 1.39
NOM1-201ENST00000275820 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
NOM1-201ENST00000275820 MFAP1P55081 439 aaKnown RBP23.73■■□□□ 1.39
NOM1-201ENST00000275820 PTMSP20962 102 aa23.72■■□□□ 1.39
NOM1-201ENST00000275820 CHAF1AQ13111 956 aaPredicted RBP23.72■■□□□ 1.39
NOM1-201ENST00000275820 CENPJQ9HC77 1338 aaPredicted RBP23.72■■□□□ 1.39
NOM1-201ENST00000275820 KIF3BO15066 747 aa23.71■■□□□ 1.39
NOM1-201ENST00000275820 ST20-MTHFSA0A0A6YYL1 179 aa23.7■■□□□ 1.38
NOM1-201ENST00000275820 CLUAP1Q96AJ1 413 aa23.7■■□□□ 1.38
NOM1-201ENST00000275820 PRKRIP1Q9H875 184 aaPredicted RBP23.7■■□□□ 1.38
NOM1-201ENST00000275820 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
NOM1-201ENST00000275820 RSPH4AQ5TD94 716 aa23.69■■□□□ 1.38
NOM1-201ENST00000275820 KIAA1211Q6ZU35 1233 aa23.68■■□□□ 1.38
NOM1-201ENST00000275820 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
NOM1-201ENST00000275820 DRC7Q8IY82 874 aa23.66■■□□□ 1.38
NOM1-201ENST00000275820 TERF2IPQ9NYB0 399 aa23.64■■□□□ 1.38
NOM1-201ENST00000275820 ZBED9Q6R2W3 1325 aa23.64■■□□□ 1.38
NOM1-201ENST00000275820 PANK3Q9H999 370 aa23.64■■□□□ 1.37
NOM1-201ENST00000275820 NPHP1O15259 732 aa23.63■■□□□ 1.37
NOM1-201ENST00000275820 SPAG9O60271 1321 aaKnown RBP23.63■■□□□ 1.37
NOM1-201ENST00000275820 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
NOM1-201ENST00000275820 GOLGA6L3A6NEY3 463 aa23.61■■□□□ 1.37
NOM1-201ENST00000275820 TULP1O00294 542 aaPredicted RBP23.61■■□□□ 1.37
NOM1-201ENST00000275820 USP47Q96K76 1375 aa23.59■■□□□ 1.37
NOM1-201ENST00000275820 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
NOM1-201ENST00000275820 RRP1P56182 461 aaKnown RBP23.58■■□□□ 1.37
NOM1-201ENST00000275820 PAK3O75914 559 aaPredicted RBP23.58■■□□□ 1.37
NOM1-201ENST00000275820 NUTM2DQ5VT03 806 aaPredicted RBP23.58■■□□□ 1.37
NOM1-201ENST00000275820 EXOC6Q8TAG9 804 aa23.58■■□□□ 1.36
NOM1-201ENST00000275820 CENPQQ7L2Z9 268 aaPredicted RBP23.57■■□□□ 1.36
NOM1-201ENST00000275820 PLIN1O60240 522 aa23.57■■□□□ 1.36
NOM1-201ENST00000275820 PDE4AP27815 886 aa23.57■■□□□ 1.36
NOM1-201ENST00000275820 RRP7AQ9Y3A4 280 aaKnown RBP23.56■■□□□ 1.36
NOM1-201ENST00000275820 HMMRO75330 724 aa23.55■■□□□ 1.36
NOM1-201ENST00000275820 JPH4Q96JJ6 628 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms