RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
SKP2-202ENST00000274255 FMN1Q68DA7 1419 aa15.03■□□□□ -0
SKP2-202ENST00000274255 CCDC7Q96M83 1385 aa15.01□□□□□ -0.01
SKP2-202ENST00000274255 CRBNQ96SW2 442 aa15□□□□□ -0.01
SKP2-202ENST00000274255 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.01
SKP2-202ENST00000274255 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
SKP2-202ENST00000274255 GZF1Q9H116 711 aaPredicted RBP14.99□□□□□ -0.01
SKP2-202ENST00000274255 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
SKP2-202ENST00000274255 MAPKBP1O60336 1514 aa14.98□□□□□ -0.01
SKP2-202ENST00000274255 BRPF3Q9ULD4 1205 aa14.98□□□□□ -0.01
SKP2-202ENST00000274255 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
SKP2-202ENST00000274255 NUP155O75694 1391 aa14.96□□□□□ -0.01
SKP2-202ENST00000274255 CLUAP1Q96AJ1 413 aa14.96□□□□□ -0.01
SKP2-202ENST00000274255 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.01
SKP2-202ENST00000274255 BCL2L13Q9BXK5 485 aa14.95□□□□□ -0.02
SKP2-202ENST00000274255 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
SKP2-202ENST00000274255 CUX1P39880 1505 aa14.95□□□□□ -0.02
SKP2-202ENST00000274255 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
SKP2-202ENST00000274255 CFTRP13569 1480 aa14.94□□□□□ -0.02
SKP2-202ENST00000274255 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
SKP2-202ENST00000274255 TPRNQ4KMQ1 711 aa14.93□□□□□ -0.02
SKP2-202ENST00000274255 USP47Q96K76 1375 aa14.93□□□□□ -0.02
SKP2-202ENST00000274255 RRP7AQ9Y3A4 280 aaKnown RBP14.93□□□□□ -0.02
SKP2-202ENST00000274255 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
SKP2-202ENST00000274255 PANK3Q9H999 370 aa14.92□□□□□ -0.02
SKP2-202ENST00000274255 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
SKP2-202ENST00000274255 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.024e-6■■■■□ 24.8
SKP2-202ENST00000274255 PTPRKQ15262 1439 aa14.91□□□□□ -0.02
SKP2-202ENST00000274255 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
SKP2-202ENST00000274255 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
SKP2-202ENST00000274255 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
SKP2-202ENST00000274255 ERICH6BQ5W0A0 696 aa14.9□□□□□ -0.02
SKP2-202ENST00000274255 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
SKP2-202ENST00000274255 CNTLNQ9NXG0 1405 aa14.9□□□□□ -0.02
SKP2-202ENST00000274255 HSP90AA1P07900 732 aaKnown RBP14.89□□□□□ -0.03
SKP2-202ENST00000274255 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
SKP2-202ENST00000274255 TCERG1O14776 1098 aaKnown RBP14.88□□□□□ -0.03
SKP2-202ENST00000274255 C20orf194Q5TEA3 1177 aa14.88□□□□□ -0.03
SKP2-202ENST00000274255 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
SKP2-202ENST00000274255 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
SKP2-202ENST00000274255 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
SKP2-202ENST00000274255 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
SKP2-202ENST00000274255 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
SKP2-202ENST00000274255 UPF2Q9HAU5 1272 aaKnown RBP14.84□□□□□ -0.03
SKP2-202ENST00000274255 NCOA2Q15596 1464 aa14.84□□□□□ -0.03
SKP2-202ENST00000274255 NAIPQ13075 1403 aa14.84□□□□□ -0.03
SKP2-202ENST00000274255 NLRP13Q86W25 1043 aa14.84□□□□□ -0.03
SKP2-202ENST00000274255 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
SKP2-202ENST00000274255 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
SKP2-202ENST00000274255 KTN1Q86UP2 1357 aaKnown RBP14.83□□□□□ -0.04
SKP2-202ENST00000274255 NESP48681 1621 aa14.82□□□□□ -0.04
SKP2-202ENST00000274255 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
SKP2-202ENST00000274255 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
SKP2-202ENST00000274255 ADAMTS8Q9UP79 889 aa14.82□□□□□ -0.04
SKP2-202ENST00000274255 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
SKP2-202ENST00000274255 MYOM3Q5VTT5 1437 aa14.81□□□□□ -0.04
SKP2-202ENST00000274255 APAF1O14727 1248 aa14.81□□□□□ -0.04
SKP2-202ENST00000274255 COG6Q9Y2V7 657 aa14.81□□□□□ -0.04
SKP2-202ENST00000274255 NFKBIBQ15653 356 aa14.81□□□□□ -0.04
SKP2-202ENST00000274255 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
SKP2-202ENST00000274255 MYBBP1AQ9BQG0 1328 aaKnown RBP14.8□□□□□ -0.04
SKP2-202ENST00000274255 ARID3AQ99856 593 aa14.8□□□□□ -0.04
SKP2-202ENST00000274255 TMF1P82094 1093 aa14.79□□□□□ -0.04
SKP2-202ENST00000274255 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
SKP2-202ENST00000274255 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
SKP2-202ENST00000274255 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
SKP2-202ENST00000274255 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
SKP2-202ENST00000274255 RALBP1Q15311 655 aa14.78□□□□□ -0.04
SKP2-202ENST00000274255 GSE1Q14687 1217 aa14.77□□□□□ -0.04
SKP2-202ENST00000274255 BCAR3O75815 825 aa14.75□□□□□ -0.05
SKP2-202ENST00000274255 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
SKP2-202ENST00000274255 PANK1Q8TE04 598 aa14.75□□□□□ -0.05
SKP2-202ENST00000274255 BACH2Q9BYV9 841 aa14.75□□□□□ -0.05
SKP2-202ENST00000274255 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
SKP2-202ENST00000274255 GOLGA2Q08379 1002 aa14.75□□□□□ -0.05
SKP2-202ENST00000274255 APBB1O00213 710 aa14.73□□□□□ -0.05
SKP2-202ENST00000274255 PRKCSHP14314 528 aaPredicted RBP14.73□□□□□ -0.05
SKP2-202ENST00000274255 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
SKP2-202ENST00000274255 CASKIN1Q8WXD9 1431 aa14.73□□□□□ -0.05
SKP2-202ENST00000274255 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
SKP2-202ENST00000274255 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
SKP2-202ENST00000274255 KIF15Q9NS87 1388 aa14.73□□□□□ -0.05
SKP2-202ENST00000274255 MFAP1P55081 439 aaKnown RBP14.73□□□□□ -0.05
SKP2-202ENST00000274255 BECN1Q14457 450 aa14.72□□□□□ -0.05
SKP2-202ENST00000274255 STK26Q9P289 416 aa14.7□□□□□ -0.06
SKP2-202ENST00000274255 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
SKP2-202ENST00000274255 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
SKP2-202ENST00000274255 CDK13Q14004 1512 aaKnown RBP14.67□□□□□ -0.06
SKP2-202ENST00000274255 ANKRD30AQ9BXX3 1397 aa14.67□□□□□ -0.06
SKP2-202ENST00000274255 SOX12O15370 315 aa14.67□□□□□ -0.06
SKP2-202ENST00000274255 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
SKP2-202ENST00000274255 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
SKP2-202ENST00000274255 MORC1Q86VD1 984 aa14.66□□□□□ -0.06
SKP2-202ENST00000274255 JPH4Q96JJ6 628 aa14.66□□□□□ -0.06
SKP2-202ENST00000274255 TRAK1Q9UPV9 953 aa14.66□□□□□ -0.06
SKP2-202ENST00000274255 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
SKP2-202ENST00000274255 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
SKP2-202ENST00000274255 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
SKP2-202ENST00000274255 ANKRD30BQ9BXX2 1392 aa14.63□□□□□ -0.07
SKP2-202ENST00000274255 GAPVD1Q14C86 1478 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms