RNA–Protein interactions for RNA: ENST00000271640.9

SETDB1-201, Transcript of SET domain bifurcated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SETDB1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-201ENST00000271640 ARXQ96QS3 562 aa9.47□□□□□ -0.89
SETDB1-201ENST00000271640 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.89
SETDB1-201ENST00000271640 PLEKHD1A6NEE1 506 aa9.46□□□□□ -0.89
SETDB1-201ENST00000271640 TCERG1O14776 1098 aaKnown RBP9.46□□□□□ -0.89
SETDB1-201ENST00000271640 NCOA2Q15596 1464 aa9.46□□□□□ -0.9
SETDB1-201ENST00000271640 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.9
SETDB1-201ENST00000271640 RGS3P49796 1198 aa9.46□□□□□ -0.9
SETDB1-201ENST00000271640 HFM1A2PYH4 1435 aa9.46□□□□□ -0.9
SETDB1-201ENST00000271640 UPF2Q9HAU5 1272 aaKnown RBP9.45□□□□□ -0.9
SETDB1-201ENST00000271640 PCF11O94913 1555 aaKnown RBP9.45□□□□□ -0.9
SETDB1-201ENST00000271640 PAK3O75914 559 aaPredicted RBP9.44□□□□□ -0.9
SETDB1-201ENST00000271640 MAP3K1Q13233 1512 aa9.44□□□□□ -0.9
SETDB1-201ENST00000271640 EXOC6Q8TAG9 804 aa9.43□□□□□ -0.9
SETDB1-201ENST00000271640 RALBP1Q15311 655 aa9.43□□□□□ -0.9
SETDB1-201ENST00000271640 USP47Q96K76 1375 aa9.43□□□□□ -0.9
SETDB1-201ENST00000271640 KTN1Q86UP2 1357 aaKnown RBP9.42□□□□□ -0.9
SETDB1-201ENST00000271640 KNSTRNQ9Y448 316 aa9.42□□□□□ -0.9
SETDB1-201ENST00000271640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.42□□□□□ -0.9
SETDB1-201ENST00000271640 AKNAQ7Z591 1439 aa9.42□□□□□ -0.9
SETDB1-201ENST00000271640 NAIPQ13075 1403 aa9.42□□□□□ -0.9
SETDB1-201ENST00000271640 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
SETDB1-201ENST00000271640 NUP155O75694 1391 aa9.41□□□□□ -0.9
SETDB1-201ENST00000271640 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
SETDB1-201ENST00000271640 PDE4AP27815 886 aa9.41□□□□□ -0.9
SETDB1-201ENST00000271640 RRP1P56182 461 aaKnown RBP9.41□□□□□ -0.9
SETDB1-201ENST00000271640 HMGXB3Q12766 1538 aa9.4□□□□□ -0.9
SETDB1-201ENST00000271640 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
SETDB1-201ENST00000271640 EFCAB5A4FU69 1503 aa9.4□□□□□ -0.9
SETDB1-201ENST00000271640 ROCK2O75116 1388 aaKnown RBP9.4□□□□□ -0.9
SETDB1-201ENST00000271640 KIF15Q9NS87 1388 aa9.4□□□□□ -0.91
SETDB1-201ENST00000271640 MYBBP1AQ9BQG0 1328 aaKnown RBP9.4□□□□□ -0.91
SETDB1-201ENST00000271640 NLRP13Q86W25 1043 aa9.4□□□□□ -0.91
SETDB1-201ENST00000271640 ZNF644Q9H582 1327 aaPredicted RBP9.39□□□□□ -0.91
SETDB1-201ENST00000271640 PLIN1O60240 522 aa9.39□□□□□ -0.91
SETDB1-201ENST00000271640 ANKRD30AQ9BXX3 1397 aa9.38□□□□□ -0.91
SETDB1-201ENST00000271640 BECN1Q14457 450 aa9.38□□□□□ -0.91
SETDB1-201ENST00000271640 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
SETDB1-201ENST00000271640 TMF1P82094 1093 aa9.38□□□□□ -0.91
SETDB1-201ENST00000271640 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
SETDB1-201ENST00000271640 PDE3BQ13370 1112 aa9.37□□□□□ -0.91
SETDB1-201ENST00000271640 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
SETDB1-201ENST00000271640 GAPVD1Q14C86 1478 aa9.36□□□□□ -0.91
SETDB1-201ENST00000271640 SLC4A3P48751 1232 aa9.36□□□□□ -0.91
SETDB1-201ENST00000271640 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
SETDB1-201ENST00000271640 USP35Q9P2H5 1018 aa9.35□□□□□ -0.91
SETDB1-201ENST00000271640 PDS5BQ9NTI5 1447 aa9.35□□□□□ -0.91
SETDB1-201ENST00000271640 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
SETDB1-201ENST00000271640 FRAT1Q92837 279 aaPredicted RBP9.34□□□□□ -0.91
SETDB1-201ENST00000271640 CRBNQ96SW2 442 aa9.34□□□□□ -0.91
SETDB1-201ENST00000271640 PTPN23Q9H3S7 1636 aa9.34□□□□□ -0.91
SETDB1-201ENST00000271640 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
SETDB1-201ENST00000271640 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
SETDB1-201ENST00000271640 CDCA8Q53HL2 280 aa9.34□□□□□ -0.91
SETDB1-201ENST00000271640 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
SETDB1-201ENST00000271640 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.91
SETDB1-201ENST00000271640 POLA1P09884 1462 aaPredicted RBP9.33□□□□□ -0.92
SETDB1-201ENST00000271640 PNISRQ8TF01 805 aaKnown RBP9.33□□□□□ -0.92
SETDB1-201ENST00000271640 AQRO60306 1485 aaKnown RBP eCLIP9.33□□□□□ -0.923e-7■■■□□ 16
SETDB1-201ENST00000271640 MS4A1P11836 297 aa9.32□□□□□ -0.92
SETDB1-201ENST00000271640 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.92
SETDB1-201ENST00000271640 NCOA1Q15788 1441 aa9.31□□□□□ -0.92
SETDB1-201ENST00000271640 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
SETDB1-201ENST00000271640 PANK3Q9H999 370 aa9.31□□□□□ -0.92
SETDB1-201ENST00000271640 TOPBP1Q92547 1522 aa9.31□□□□□ -0.92
SETDB1-201ENST00000271640 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
SETDB1-201ENST00000271640 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
SETDB1-201ENST00000271640 GOLGA2Q08379 1002 aa9.3□□□□□ -0.92
SETDB1-201ENST00000271640 GSE1Q14687 1217 aa9.3□□□□□ -0.92
SETDB1-201ENST00000271640 IL27Q8NEV9 243 aa9.3□□□□□ -0.92
SETDB1-201ENST00000271640 SLKQ9H2G2 1235 aaPredicted RBP9.3□□□□□ -0.92
SETDB1-201ENST00000271640 BRD4O60885 1362 aaPredicted RBP9.29□□□□□ -0.92
SETDB1-201ENST00000271640 NESP48681 1621 aa9.29□□□□□ -0.92
SETDB1-201ENST00000271640 CCDC146Q8IYE0 955 aa9.29□□□□□ -0.92
SETDB1-201ENST00000271640 MIA2Q96PC5 1412 aa9.28□□□□□ -0.92
SETDB1-201ENST00000271640 CENPQQ7L2Z9 268 aaPredicted RBP9.28□□□□□ -0.92
SETDB1-201ENST00000271640 CFAP43Q8NDM7 1665 aa9.28□□□□□ -0.92
SETDB1-201ENST00000271640 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
SETDB1-201ENST00000271640 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
SETDB1-201ENST00000271640 SPRYD3Q8NCJ5 442 aa9.28□□□□□ -0.92
SETDB1-201ENST00000271640 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
SETDB1-201ENST00000271640 ABCA10Q8WWZ4 1543 aa9.27□□□□□ -0.92
SETDB1-201ENST00000271640 PRDM2Q13029 1718 aa9.27□□□□□ -0.93
SETDB1-201ENST00000271640 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
SETDB1-201ENST00000271640 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
SETDB1-201ENST00000271640 DNMBPQ6XZF7 1577 aa9.26□□□□□ -0.93
SETDB1-201ENST00000271640 FTSJ3Q8IY81 847 aaKnown RBP9.26□□□□□ -0.93
SETDB1-201ENST00000271640 DAPK1P53355 1430 aa9.26□□□□□ -0.93
SETDB1-201ENST00000271640 CDK13Q14004 1512 aaKnown RBP9.26□□□□□ -0.93
SETDB1-201ENST00000271640 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
SETDB1-201ENST00000271640 CARMIL2Q6F5E8 1435 aa9.26□□□□□ -0.93
SETDB1-201ENST00000271640 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
SETDB1-201ENST00000271640 ANKRD50Q9ULJ7 1429 aa9.26□□□□□ -0.93
SETDB1-201ENST00000271640 NFKBIBQ15653 356 aa9.25□□□□□ -0.93
SETDB1-201ENST00000271640 SENP3Q9H4L4 574 aaPredicted RBP9.25□□□□□ -0.93
SETDB1-201ENST00000271640 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
SETDB1-201ENST00000271640 HECW1Q76N89 1606 aa9.24□□□□□ -0.93
SETDB1-201ENST00000271640 CFAP53Q96M91 514 aa9.24□□□□□ -0.93
SETDB1-201ENST00000271640 NAP1L5Q96NT1 182 aaPredicted RBP9.24□□□□□ -0.93
SETDB1-201ENST00000271640 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
SETDB1-201ENST00000271640 RPRD2Q5VT52 1461 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms