RNA–Protein interactions for RNA: ENST00000271640.9

SETDB1-201, Transcript of SET domain bifurcated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SETDB1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-201ENST00000271640 NISCHQ9Y2I1 1504 aa13.2□□□□□ -0.3
SETDB1-201ENST00000271640 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
SETDB1-201ENST00000271640 SHROOM4Q9ULL8 1493 aa12.16□□□□□ -0.46
SETDB1-201ENST00000271640 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
SETDB1-201ENST00000271640 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
SETDB1-201ENST00000271640 HRCP23327 699 aa11.58□□□□□ -0.56
SETDB1-201ENST00000271640 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
SETDB1-201ENST00000271640 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
SETDB1-201ENST00000271640 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
SETDB1-201ENST00000271640 FAM9AQ8IZU1 332 aaPredicted RBP11.38□□□□□ -0.59
SETDB1-201ENST00000271640 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
SETDB1-201ENST00000271640 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
SETDB1-201ENST00000271640 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
SETDB1-201ENST00000271640 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
SETDB1-201ENST00000271640 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
SETDB1-201ENST00000271640 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
SETDB1-201ENST00000271640 MYO15BQ96JP2 1530 aa11.13□□□□□ -0.63
SETDB1-201ENST00000271640 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
SETDB1-201ENST00000271640 ZCCHC6Q5VYS8 1495 aaKnown RBP11.1□□□□□ -0.63
SETDB1-201ENST00000271640 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
SETDB1-201ENST00000271640 DCAF1Q9Y4B6 1507 aa11□□□□□ -0.65
SETDB1-201ENST00000271640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
SETDB1-201ENST00000271640 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.66
SETDB1-201ENST00000271640 APLP2Q06481 763 aa10.9□□□□□ -0.66
SETDB1-201ENST00000271640 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
SETDB1-201ENST00000271640 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
SETDB1-201ENST00000271640 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
SETDB1-201ENST00000271640 RANGAP1P46060 587 aaPredicted RBP10.82□□□□□ -0.68
SETDB1-201ENST00000271640 MYT1Q01538 1121 aa10.77□□□□□ -0.68
SETDB1-201ENST00000271640 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
SETDB1-201ENST00000271640 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
SETDB1-201ENST00000271640 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
SETDB1-201ENST00000271640 HNRNPUL2Q1KMD3 747 aaKnown RBP10.71□□□□□ -0.69
SETDB1-201ENST00000271640 SCRIBQ14160 1630 aa10.67□□□□□ -0.7
SETDB1-201ENST00000271640 NEUROD1Q13562 356 aa10.66□□□□□ -0.7
SETDB1-201ENST00000271640 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
SETDB1-201ENST00000271640 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
SETDB1-201ENST00000271640 ABCC9O60706 1549 aa10.58□□□□□ -0.72
SETDB1-201ENST00000271640 ITGAEP38570 1179 aa10.51□□□□□ -0.73
SETDB1-201ENST00000271640 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
SETDB1-201ENST00000271640 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
SETDB1-201ENST00000271640 NEFLP07196 543 aa10.47□□□□□ -0.73
SETDB1-201ENST00000271640 RB1CC1Q8TDY2 1594 aa10.47□□□□□ -0.73
SETDB1-201ENST00000271640 MIER1Q8N108 512 aa10.42□□□□□ -0.74
SETDB1-201ENST00000271640 ERICH6Q7L0X2 663 aa10.41□□□□□ -0.74
SETDB1-201ENST00000271640 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
SETDB1-201ENST00000271640 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
SETDB1-201ENST00000271640 CECR2Q9BXF3 1484 aa10.38□□□□□ -0.75
SETDB1-201ENST00000271640 BCANQ96GW7 911 aa10.36□□□□□ -0.75
SETDB1-201ENST00000271640 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
SETDB1-201ENST00000271640 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
SETDB1-201ENST00000271640 FAM50AQ14320 339 aaKnown RBP10.26□□□□□ -0.77
SETDB1-201ENST00000271640 CLIP1P30622 1438 aa10.26□□□□□ -0.77
SETDB1-201ENST00000271640 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
SETDB1-201ENST00000271640 SOGA1O94964 1423 aa10.26□□□□□ -0.77
SETDB1-201ENST00000271640 EEA1Q15075 1411 aa10.26□□□□□ -0.77
SETDB1-201ENST00000271640 CLSPNQ9HAW4 1339 aa10.24□□□□□ -0.77
SETDB1-201ENST00000271640 ABCC8Q09428 1581 aa10.24□□□□□ -0.77
SETDB1-201ENST00000271640 NACADO15069 1562 aa10.24□□□□□ -0.77
SETDB1-201ENST00000271640 WIZO95785 1651 aa10.23□□□□□ -0.77
SETDB1-201ENST00000271640 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
SETDB1-201ENST00000271640 BAZ1AQ9NRL2 1556 aaPredicted RBP10.21□□□□□ -0.78
SETDB1-201ENST00000271640 FKBP8Q14318 412 aa10.19□□□□□ -0.78
SETDB1-201ENST00000271640 ANP32CO43423 234 aa10.19□□□□□ -0.78
SETDB1-201ENST00000271640 WRNQ14191 1432 aaPredicted RBP eCLIP10.19□□□□□ -0.78
SETDB1-201ENST00000271640 DDX10Q13206 875 aaKnown RBP10.17□□□□□ -0.78
SETDB1-201ENST00000271640 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
SETDB1-201ENST00000271640 SUPT16HQ9Y5B9 1047 aaKnown RBP10.14□□□□□ -0.79
SETDB1-201ENST00000271640 CNGB1Q14028 1251 aaPredicted RBP10.14□□□□□ -0.79
SETDB1-201ENST00000271640 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
SETDB1-201ENST00000271640 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
SETDB1-201ENST00000271640 POLR3GLQ9BT43 218 aa10.11□□□□□ -0.79
SETDB1-201ENST00000271640 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
SETDB1-201ENST00000271640 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
SETDB1-201ENST00000271640 CDK11AQ9UQ88 783 aaPredicted RBP10.09□□□□□ -0.79
SETDB1-201ENST00000271640 VPS8Q8N3P4 1428 aa10.09□□□□□ -0.79
SETDB1-201ENST00000271640 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
SETDB1-201ENST00000271640 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
SETDB1-201ENST00000271640 HNRNPUQ00839 825 aaKnown RBP eCLIP10.03□□□□□ -0.8
SETDB1-201ENST00000271640 TONSLQ96HA7 1378 aa10.03□□□□□ -0.8
SETDB1-201ENST00000271640 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
SETDB1-201ENST00000271640 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
SETDB1-201ENST00000271640 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
SETDB1-201ENST00000271640 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
SETDB1-201ENST00000271640 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
SETDB1-201ENST00000271640 CCNB3Q8WWL7 1395 aa9.98□□□□□ -0.81
SETDB1-201ENST00000271640 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
SETDB1-201ENST00000271640 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
SETDB1-201ENST00000271640 SMARCA2P51531 1590 aa9.96□□□□□ -0.81
SETDB1-201ENST00000271640 DHX57Q6P158 1386 aaKnown RBP9.96□□□□□ -0.81
SETDB1-201ENST00000271640 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
SETDB1-201ENST00000271640 KIF27Q86VH2 1401 aa9.94□□□□□ -0.82
SETDB1-201ENST00000271640 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
SETDB1-201ENST00000271640 FAM9BQ8IZU0 186 aa9.93□□□□□ -0.82
SETDB1-201ENST00000271640 ZNF326Q5BKZ1 582 aaKnown RBP9.92□□□□□ -0.82
SETDB1-201ENST00000271640 ARID3CA6NKF2 412 aa9.9□□□□□ -0.82
SETDB1-201ENST00000271640 RAB3GAP2Q9H2M9 1393 aa9.9□□□□□ -0.82
SETDB1-201ENST00000271640 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
SETDB1-201ENST00000271640 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
SETDB1-201ENST00000271640 DAXXQ9UER7 740 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms