RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 C11orf95C9JLR9 678 aaPredicted RBP18.41■□□□□ 0.54
CCDC97-201ENST00000269967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC97-201ENST00000269967 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
CCDC97-201ENST00000269967 PTPN23Q9H3S7 1636 aa18.4■□□□□ 0.54
CCDC97-201ENST00000269967 PLB1Q6P1J6 1458 aa18.4■□□□□ 0.54
CCDC97-201ENST00000269967 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
CCDC97-201ENST00000269967 SUPT6HQ7KZ85 1726 aaKnown RBP18.39■□□□□ 0.54
CCDC97-201ENST00000269967 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
CCDC97-201ENST00000269967 TARBP1Q13395 1621 aaKnown RBP18.36■□□□□ 0.53
CCDC97-201ENST00000269967 CCER2I3L3R5 266 aa18.35■□□□□ 0.53
CCDC97-201ENST00000269967 IFT140Q96RY7 1462 aa18.34■□□□□ 0.53
CCDC97-201ENST00000269967 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
CCDC97-201ENST00000269967 DCAF11Q8TEB1 546 aa18.33■□□□□ 0.52
CCDC97-201ENST00000269967 UGGT2Q9NYU1 1516 aa18.32■□□□□ 0.52
CCDC97-201ENST00000269967 NUP155O75694 1391 aa18.32■□□□□ 0.52
CCDC97-201ENST00000269967 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
CCDC97-201ENST00000269967 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
CCDC97-201ENST00000269967 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
CCDC97-201ENST00000269967 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
CCDC97-201ENST00000269967 DAPK1P53355 1430 aa18.29■□□□□ 0.52
CCDC97-201ENST00000269967 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
CCDC97-201ENST00000269967 TSHZ2Q9NRE2 1034 aa18.29■□□□□ 0.52
CCDC97-201ENST00000269967 ABCC5O15440 1437 aa18.29■□□□□ 0.52
CCDC97-201ENST00000269967 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
CCDC97-201ENST00000269967 KDM6BO15054 1643 aa18.28■□□□□ 0.52
CCDC97-201ENST00000269967 NUP153P49790 1475 aaKnown RBP18.27■□□□□ 0.52
CCDC97-201ENST00000269967 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
CCDC97-201ENST00000269967 MIA2Q96PC5 1412 aa18.25■□□□□ 0.51
CCDC97-201ENST00000269967 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
CCDC97-201ENST00000269967 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
CCDC97-201ENST00000269967 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
CCDC97-201ENST00000269967 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
CCDC97-201ENST00000269967 ANKRD30AQ9BXX3 1397 aa18.22■□□□□ 0.51
CCDC97-201ENST00000269967 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
CCDC97-201ENST00000269967 WDR62O43379 1518 aa18.2■□□□□ 0.5
CCDC97-201ENST00000269967 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
CCDC97-201ENST00000269967 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
CCDC97-201ENST00000269967 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
CCDC97-201ENST00000269967 PTPRGP23470 1445 aa18.19■□□□□ 0.5
CCDC97-201ENST00000269967 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
CCDC97-201ENST00000269967 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
CCDC97-201ENST00000269967 ANKRD50Q9ULJ7 1429 aa18.16■□□□□ 0.5
CCDC97-201ENST00000269967 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
CCDC97-201ENST00000269967 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
CCDC97-201ENST00000269967 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
CCDC97-201ENST00000269967 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
CCDC97-201ENST00000269967 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
CCDC97-201ENST00000269967 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
CCDC97-201ENST00000269967 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.49
CCDC97-201ENST00000269967 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
CCDC97-201ENST00000269967 USP47Q96K76 1375 aa18.13■□□□□ 0.49
CCDC97-201ENST00000269967 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
CCDC97-201ENST00000269967 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
CCDC97-201ENST00000269967 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
CCDC97-201ENST00000269967 RAPGEF6Q8TEU7 1601 aa18.1■□□□□ 0.49
CCDC97-201ENST00000269967 AKNAQ7Z591 1439 aa18.09■□□□□ 0.49
CCDC97-201ENST00000269967 CC2D1BQ5T0F9 858 aaKnown RBP18.09■□□□□ 0.49
CCDC97-201ENST00000269967 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
CCDC97-201ENST00000269967 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.48
CCDC97-201ENST00000269967 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
CCDC97-201ENST00000269967 RPRD2Q5VT52 1461 aaKnown RBP18.06■□□□□ 0.48
CCDC97-201ENST00000269967 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
CCDC97-201ENST00000269967 RBM19Q9Y4C8 960 aaKnown RBP18.06■□□□□ 0.48
CCDC97-201ENST00000269967 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
CCDC97-201ENST00000269967 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
CCDC97-201ENST00000269967 ATP10BO94823 1461 aa18.05■□□□□ 0.48
CCDC97-201ENST00000269967 KIF14Q15058 1648 aa18.05■□□□□ 0.48
CCDC97-201ENST00000269967 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
CCDC97-201ENST00000269967 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
CCDC97-201ENST00000269967 KIAA1107Q9UPP5 1409 aa18.03■□□□□ 0.48
CCDC97-201ENST00000269967 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
CCDC97-201ENST00000269967 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
CCDC97-201ENST00000269967 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
CCDC97-201ENST00000269967 PZPP20742 1482 aa17.98■□□□□ 0.47
CCDC97-201ENST00000269967 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
CCDC97-201ENST00000269967 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
CCDC97-201ENST00000269967 EFCAB2Q5VUJ9 269 aa17.93■□□□□ 0.46
CCDC97-201ENST00000269967 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
CCDC97-201ENST00000269967 TEX14Q8IWB6 1497 aa17.93■□□□□ 0.46
CCDC97-201ENST00000269967 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
CCDC97-201ENST00000269967 NUP160Q12769 1436 aa17.92■□□□□ 0.46
CCDC97-201ENST00000269967 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
CCDC97-201ENST00000269967 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
CCDC97-201ENST00000269967 KIF3BO15066 747 aa17.91■□□□□ 0.46
CCDC97-201ENST00000269967 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
CCDC97-201ENST00000269967 BCL11AQ9H165 835 aa17.88■□□□□ 0.45
CCDC97-201ENST00000269967 PANK3Q9H999 370 aa17.88■□□□□ 0.45
CCDC97-201ENST00000269967 SPAG9O60271 1321 aaKnown RBP17.88■□□□□ 0.45
CCDC97-201ENST00000269967 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
CCDC97-201ENST00000269967 NUTM2DQ5VT03 806 aaPredicted RBP17.85■□□□□ 0.45
CCDC97-201ENST00000269967 GGT6Q6P531 493 aa17.84■□□□□ 0.45
CCDC97-201ENST00000269967 PNISRQ8TF01 805 aaKnown RBP17.84■□□□□ 0.45
CCDC97-201ENST00000269967 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
CCDC97-201ENST00000269967 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.45
CCDC97-201ENST00000269967 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.44
CCDC97-201ENST00000269967 TMF1P82094 1093 aa17.82■□□□□ 0.44
CCDC97-201ENST00000269967 NPM2Q86SE8 214 aaKnown RBP17.82■□□□□ 0.44
CCDC97-201ENST00000269967 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
CCDC97-201ENST00000269967 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCDC97-201ENST00000269967 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms