RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 PRXQ9BXM0 1461 aa12.97□□□□□ -0.33
ABCB1-201ENST00000265724 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
ABCB1-201ENST00000265724 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
ABCB1-201ENST00000265724 ZBTB7CA1YPR0 619 aa12.94□□□□□ -0.34
ABCB1-201ENST00000265724 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
ABCB1-201ENST00000265724 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
ABCB1-201ENST00000265724 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
ABCB1-201ENST00000265724 FGD6Q6ZV73 1430 aa12.93□□□□□ -0.34
ABCB1-201ENST00000265724 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
ABCB1-201ENST00000265724 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
ABCB1-201ENST00000265724 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
ABCB1-201ENST00000265724 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
ABCB1-201ENST00000265724 CASKIN1Q8WXD9 1431 aa12.91□□□□□ -0.34
ABCB1-201ENST00000265724 MYOM3Q5VTT5 1437 aa12.91□□□□□ -0.34
ABCB1-201ENST00000265724 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
ABCB1-201ENST00000265724 STK26Q9P289 416 aa12.9□□□□□ -0.34
ABCB1-201ENST00000265724 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
ABCB1-201ENST00000265724 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
ABCB1-201ENST00000265724 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
ABCB1-201ENST00000265724 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
ABCB1-201ENST00000265724 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
ABCB1-201ENST00000265724 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
ABCB1-201ENST00000265724 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
ABCB1-201ENST00000265724 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
ABCB1-201ENST00000265724 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
ABCB1-201ENST00000265724 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
ABCB1-201ENST00000265724 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
ABCB1-201ENST00000265724 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
ABCB1-201ENST00000265724 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
ABCB1-201ENST00000265724 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
ABCB1-201ENST00000265724 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
ABCB1-201ENST00000265724 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
ABCB1-201ENST00000265724 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
ABCB1-201ENST00000265724 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
ABCB1-201ENST00000265724 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
ABCB1-201ENST00000265724 FYCO1Q9BQS8 1478 aa12.83□□□□□ -0.36
ABCB1-201ENST00000265724 CYB5RLQ6IPT4 315 aa12.83□□□□□ -0.36
ABCB1-201ENST00000265724 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
ABCB1-201ENST00000265724 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
ABCB1-201ENST00000265724 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
ABCB1-201ENST00000265724 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
ABCB1-201ENST00000265724 RALBP1Q15311 655 aa12.82□□□□□ -0.36
ABCB1-201ENST00000265724 LMOD2Q6P5Q4 547 aa12.82□□□□□ -0.36
ABCB1-201ENST00000265724 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
ABCB1-201ENST00000265724 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
ABCB1-201ENST00000265724 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
ABCB1-201ENST00000265724 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
ABCB1-201ENST00000265724 UACAQ9BZF9 1416 aa12.8□□□□□ -0.36
ABCB1-201ENST00000265724 SOX12O15370 315 aa12.8□□□□□ -0.36
ABCB1-201ENST00000265724 NBR1Q14596 966 aa12.8□□□□□ -0.36
ABCB1-201ENST00000265724 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
ABCB1-201ENST00000265724 KIF15Q9NS87 1388 aa12.79□□□□□ -0.36
ABCB1-201ENST00000265724 A0A0G2JS52 829 aa12.78□□□□□ -0.36
ABCB1-201ENST00000265724 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.37
ABCB1-201ENST00000265724 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
ABCB1-201ENST00000265724 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
ABCB1-201ENST00000265724 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
ABCB1-201ENST00000265724 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
ABCB1-201ENST00000265724 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
ABCB1-201ENST00000265724 USP47Q96K76 1375 aa12.76□□□□□ -0.37
ABCB1-201ENST00000265724 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
ABCB1-201ENST00000265724 ANKRD50Q9ULJ7 1429 aa12.75□□□□□ -0.37
ABCB1-201ENST00000265724 RGS3P49796 1198 aa12.75□□□□□ -0.37
ABCB1-201ENST00000265724 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
ABCB1-201ENST00000265724 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
ABCB1-201ENST00000265724 PRKRIP1Q9H875 184 aaPredicted RBP12.73□□□□□ -0.37
ABCB1-201ENST00000265724 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
ABCB1-201ENST00000265724 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
ABCB1-201ENST00000265724 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
ABCB1-201ENST00000265724 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
ABCB1-201ENST00000265724 PANK3Q9H999 370 aa12.72□□□□□ -0.37
ABCB1-201ENST00000265724 AFAP1Q8N556 730 aa12.71□□□□□ -0.37
ABCB1-201ENST00000265724 SYNJ2O15056 1496 aa12.71□□□□□ -0.37
ABCB1-201ENST00000265724 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.38
ABCB1-201ENST00000265724 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
ABCB1-201ENST00000265724 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
ABCB1-201ENST00000265724 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
ABCB1-201ENST00000265724 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
ABCB1-201ENST00000265724 MS4A1P11836 297 aa12.68□□□□□ -0.38
ABCB1-201ENST00000265724 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
ABCB1-201ENST00000265724 VGFO15240 615 aaPredicted RBP12.67□□□□□ -0.38
ABCB1-201ENST00000265724 KIAA0586Q9BVV6 1533 aa12.67□□□□□ -0.38
ABCB1-201ENST00000265724 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
ABCB1-201ENST00000265724 CCDC146Q8IYE0 955 aa12.67□□□□□ -0.38
ABCB1-201ENST00000265724 ARHGAP5Q13017 1502 aa12.66□□□□□ -0.38
ABCB1-201ENST00000265724 BECN1Q14457 450 aa12.66□□□□□ -0.38
ABCB1-201ENST00000265724 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
ABCB1-201ENST00000265724 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
ABCB1-201ENST00000265724 HFM1A2PYH4 1435 aa12.65□□□□□ -0.38
ABCB1-201ENST00000265724 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
ABCB1-201ENST00000265724 CDK13Q14004 1512 aaKnown RBP12.64□□□□□ -0.39
ABCB1-201ENST00000265724 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
ABCB1-201ENST00000265724 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
ABCB1-201ENST00000265724 EID1Q9Y6B2 187 aa12.64□□□□□ -0.39
ABCB1-201ENST00000265724 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
ABCB1-201ENST00000265724 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
ABCB1-201ENST00000265724 ARXQ96QS3 562 aa12.64□□□□□ -0.39
ABCB1-201ENST00000265724 CCDC7Q96M83 1385 aa12.64□□□□□ -0.39
ABCB1-201ENST00000265724 EPRSP07814 1512 aaKnown RBP12.63□□□□□ -0.39
ABCB1-201ENST00000265724 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms