RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■■■■ 28.5
TNPO3-201ENST00000265388 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
TNPO3-201ENST00000265388 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
TNPO3-201ENST00000265388 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
TNPO3-201ENST00000265388 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
TNPO3-201ENST00000265388 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
TNPO3-201ENST00000265388 IQGAP2Q13576 1575 aa11.35□□□□□ -0.59
TNPO3-201ENST00000265388 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
TNPO3-201ENST00000265388 NBPF8Q3BBV2 869 aa11.35□□□□□ -0.59
TNPO3-201ENST00000265388 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
TNPO3-201ENST00000265388 MYT1LQ9UL68 1186 aa11.35□□□□□ -0.59
TNPO3-201ENST00000265388 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
TNPO3-201ENST00000265388 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
TNPO3-201ENST00000265388 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
TNPO3-201ENST00000265388 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
TNPO3-201ENST00000265388 KIF7Q2M1P5 1343 aa11.33□□□□□ -0.6
TNPO3-201ENST00000265388 ANKRD30AQ9BXX3 1397 aa11.32□□□□□ -0.6
TNPO3-201ENST00000265388 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
TNPO3-201ENST00000265388 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
TNPO3-201ENST00000265388 DAPK1P53355 1430 aa11.32□□□□□ -0.6
TNPO3-201ENST00000265388 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
TNPO3-201ENST00000265388 NUP155O75694 1391 aa11.32□□□□□ -0.6
TNPO3-201ENST00000265388 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
TNPO3-201ENST00000265388 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
TNPO3-201ENST00000265388 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
TNPO3-201ENST00000265388 CARMIL2Q6F5E8 1435 aa11.31□□□□□ -0.6
TNPO3-201ENST00000265388 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
TNPO3-201ENST00000265388 PRG4Q92954 1404 aaPredicted RBP11.29□□□□□ -0.6
TNPO3-201ENST00000265388 MAGI3Q5TCQ9 1506 aa11.29□□□□□ -0.6
TNPO3-201ENST00000265388 USP47Q96K76 1375 aa11.28□□□□□ -0.6
TNPO3-201ENST00000265388 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■□ 20.8
TNPO3-201ENST00000265388 ABCC5O15440 1437 aa11.28□□□□□ -0.6
TNPO3-201ENST00000265388 ANKRD30BQ9BXX2 1392 aa11.28□□□□□ -0.6
TNPO3-201ENST00000265388 ZBED9Q6R2W3 1325 aa11.27□□□□□ -0.6
TNPO3-201ENST00000265388 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.6
TNPO3-201ENST00000265388 TCOF1Q13428 1488 aaKnown RBP11.27□□□□□ -0.61
TNPO3-201ENST00000265388 KIF21AQ7Z4S6 1674 aa11.27□□□□□ -0.61
TNPO3-201ENST00000265388 IFT140Q96RY7 1462 aa11.26□□□□□ -0.61
TNPO3-201ENST00000265388 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
TNPO3-201ENST00000265388 KIAA0586Q9BVV6 1533 aa11.26□□□□□ -0.61
TNPO3-201ENST00000265388 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
TNPO3-201ENST00000265388 ROCK1Q13464 1354 aa11.26□□□□□ -0.61
TNPO3-201ENST00000265388 TROQ12816 1431 aaPredicted RBP11.25□□□□□ -0.61
TNPO3-201ENST00000265388 ANP32AP39687 249 aaKnown RBP11.24□□□□□ -0.61
TNPO3-201ENST00000265388 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
TNPO3-201ENST00000265388 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
TNPO3-201ENST00000265388 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
TNPO3-201ENST00000265388 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
TNPO3-201ENST00000265388 WDR62O43379 1518 aa11.23□□□□□ -0.61
TNPO3-201ENST00000265388 ADAMTS12P58397 1594 aa11.22□□□□□ -0.61
TNPO3-201ENST00000265388 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
TNPO3-201ENST00000265388 NUDCQ9Y266 331 aa11.22□□□□□ -0.61
TNPO3-201ENST00000265388 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
TNPO3-201ENST00000265388 PLB1Q6P1J6 1458 aa11.21□□□□□ -0.61
TNPO3-201ENST00000265388 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
TNPO3-201ENST00000265388 KDM6BO15054 1643 aa11.21□□□□□ -0.62
TNPO3-201ENST00000265388 CAMSAP2Q08AD1 1489 aa11.21□□□□□ -0.62
TNPO3-201ENST00000265388 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
TNPO3-201ENST00000265388 GRIN2AQ12879 1464 aa11.2□□□□□ -0.62
TNPO3-201ENST00000265388 TARBP1Q13395 1621 aaKnown RBP11.2□□□□□ -0.62
TNPO3-201ENST00000265388 CC2D1BQ5T0F9 858 aaKnown RBP11.2□□□□□ -0.62
TNPO3-201ENST00000265388 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
TNPO3-201ENST00000265388 PBRM1Q86U86 1689 aa11.19□□□□□ -0.62
TNPO3-201ENST00000265388 NBR1Q14596 966 aa11.19□□□□□ -0.62
TNPO3-201ENST00000265388 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
TNPO3-201ENST00000265388 KIF15Q9NS87 1388 aa11.18□□□□□ -0.62
TNPO3-201ENST00000265388 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
TNPO3-201ENST00000265388 LRRIQ1Q96JM4 1722 aa11.17□□□□□ -0.62
TNPO3-201ENST00000265388 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
TNPO3-201ENST00000265388 RAPGEF6Q8TEU7 1601 aa11.16□□□□□ -0.62
TNPO3-201ENST00000265388 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
TNPO3-201ENST00000265388 RALBP1Q15311 655 aa11.16□□□□□ -0.62
TNPO3-201ENST00000265388 PTPRGP23470 1445 aa11.15□□□□□ -0.62
TNPO3-201ENST00000265388 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.62
TNPO3-201ENST00000265388 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
TNPO3-201ENST00000265388 FANCIQ9NVI1 1328 aa11.15□□□□□ -0.63
TNPO3-201ENST00000265388 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.63
TNPO3-201ENST00000265388 MYBBP1AQ9BQG0 1328 aaKnown RBP11.14□□□□□ -0.63
TNPO3-201ENST00000265388 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
TNPO3-201ENST00000265388 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
TNPO3-201ENST00000265388 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
TNPO3-201ENST00000265388 WDR43Q15061 677 aaKnown RBP eCLIP11.13□□□□□ -0.63
TNPO3-201ENST00000265388 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
TNPO3-201ENST00000265388 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
TNPO3-201ENST00000265388 TEX14Q8IWB6 1497 aa11.13□□□□□ -0.63
TNPO3-201ENST00000265388 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
TNPO3-201ENST00000265388 NLRP13Q86W25 1043 aa11.12□□□□□ -0.63
TNPO3-201ENST00000265388 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
TNPO3-201ENST00000265388 KDM5BQ9UGL1 1544 aa11.12□□□□□ -0.63
TNPO3-201ENST00000265388 TMF1P82094 1093 aa11.12□□□□□ -0.63
TNPO3-201ENST00000265388 RCAN3Q9UKA8 241 aa11.12□□□□□ -0.63
TNPO3-201ENST00000265388 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
TNPO3-201ENST00000265388 MSH5O43196 834 aa11.11□□□□□ -0.63
TNPO3-201ENST00000265388 PZPP20742 1482 aa11.11□□□□□ -0.63
TNPO3-201ENST00000265388 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
TNPO3-201ENST00000265388 KNSTRNQ9Y448 316 aa11.11□□□□□ -0.63
TNPO3-201ENST00000265388 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
TNPO3-201ENST00000265388 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
TNPO3-201ENST00000265388 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
TNPO3-201ENST00000265388 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms