RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 NCOA2Q15596 1464 aa11.39□□□□□ -0.59
DEPDC1B-201ENST00000265036 ADGRL1O94910 1474 aa11.39□□□□□ -0.59
DEPDC1B-201ENST00000265036 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
DEPDC1B-201ENST00000265036 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
DEPDC1B-201ENST00000265036 NEO1Q92859 1461 aa11.38□□□□□ -0.59
DEPDC1B-201ENST00000265036 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
DEPDC1B-201ENST00000265036 FRMPD1Q5SYB0 1578 aa11.37□□□□□ -0.59
DEPDC1B-201ENST00000265036 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
DEPDC1B-201ENST00000265036 RICTORQ6R327 1708 aa11.36□□□□□ -0.59
DEPDC1B-201ENST00000265036 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
DEPDC1B-201ENST00000265036 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
DEPDC1B-201ENST00000265036 ITSN2Q9NZM3 1697 aa11.35□□□□□ -0.59
DEPDC1B-201ENST00000265036 SAMD9LQ8IVG5 1584 aa11.35□□□□□ -0.59
DEPDC1B-201ENST00000265036 EFCAB2Q5VUJ9 269 aa11.35□□□□□ -0.59
DEPDC1B-201ENST00000265036 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
DEPDC1B-201ENST00000265036 SYCP2Q9BX26 1530 aa11.34□□□□□ -0.59
DEPDC1B-201ENST00000265036 CFDP1Q9UEE9 299 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1B-201ENST00000265036 DENND4BO75064 1496 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1B-201ENST00000265036 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1B-201ENST00000265036 ABCC1P33527 1531 aa11.34□□□□□ -0.59
DEPDC1B-201ENST00000265036 ARHGEF12Q9NZN5 1544 aa11.33□□□□□ -0.6
DEPDC1B-201ENST00000265036 POGZQ7Z3K3 1410 aa11.32□□□□□ -0.6
DEPDC1B-201ENST00000265036 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
DEPDC1B-201ENST00000265036 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
DEPDC1B-201ENST00000265036 TRAPPC8Q9Y2L5 1435 aa11.31□□□□□ -0.6
DEPDC1B-201ENST00000265036 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
DEPDC1B-201ENST00000265036 HNRNPMP52272 730 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■■■■□ 25.4
DEPDC1B-201ENST00000265036 YEATS2Q9ULM3 1422 aa11.3□□□□□ -0.6
DEPDC1B-201ENST00000265036 CAMSAP2Q08AD1 1489 aa11.29□□□□□ -0.6
DEPDC1B-201ENST00000265036 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
DEPDC1B-201ENST00000265036 MYOM3Q5VTT5 1437 aa11.28□□□□□ -0.6
DEPDC1B-201ENST00000265036 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
DEPDC1B-201ENST00000265036 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.61
DEPDC1B-201ENST00000265036 KDM5CP41229 1560 aa11.26□□□□□ -0.61
DEPDC1B-201ENST00000265036 HECW2Q9P2P5 1572 aa11.26□□□□□ -0.61
DEPDC1B-201ENST00000265036 ZFYVE16Q7Z3T8 1539 aa11.26□□□□□ -0.61
DEPDC1B-201ENST00000265036 SIGLEC1Q9BZZ2 1709 aa11.26□□□□□ -0.61
DEPDC1B-201ENST00000265036 ABCA6Q8N139 1617 aa11.25□□□□□ -0.61
DEPDC1B-201ENST00000265036 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
DEPDC1B-201ENST00000265036 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
DEPDC1B-201ENST00000265036 KIDINS220Q9ULH0 1771 aa11.23□□□□□ -0.61
DEPDC1B-201ENST00000265036 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
DEPDC1B-201ENST00000265036 MBD5Q9P267 1494 aa11.23□□□□□ -0.61
DEPDC1B-201ENST00000265036 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
DEPDC1B-201ENST00000265036 DIP2CQ9Y2E4 1556 aa11.23□□□□□ -0.61
DEPDC1B-201ENST00000265036 ATP7AQ04656 1500 aa11.22□□□□□ -0.61
DEPDC1B-201ENST00000265036 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
DEPDC1B-201ENST00000265036 SPAG9O60271 1321 aaKnown RBP11.21□□□□□ -0.61
DEPDC1B-201ENST00000265036 CCDC141Q6ZP82 1450 aa11.21□□□□□ -0.61
DEPDC1B-201ENST00000265036 FAM50AQ14320 339 aaKnown RBP11.21□□□□□ -0.61
DEPDC1B-201ENST00000265036 INO80Q9ULG1 1556 aaPredicted RBP11.21□□□□□ -0.61
DEPDC1B-201ENST00000265036 MLECQ14165 292 aa11.2□□□□□ -0.62
DEPDC1B-201ENST00000265036 MIA2Q96PC5 1412 aa11.2□□□□□ -0.62
DEPDC1B-201ENST00000265036 MAGI2Q86UL8 1455 aa11.19□□□□□ -0.62
DEPDC1B-201ENST00000265036 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
DEPDC1B-201ENST00000265036 ARHGEF5Q12774 1597 aa11.18□□□□□ -0.62
DEPDC1B-201ENST00000265036 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
DEPDC1B-201ENST00000265036 C9orf84Q5VXU9 1444 aa11.17□□□□□ -0.62
DEPDC1B-201ENST00000265036 ATP10AO60312 1499 aa11.17□□□□□ -0.62
DEPDC1B-201ENST00000265036 CROCC2H7BZ55 1655 aa11.17□□□□□ -0.62
DEPDC1B-201ENST00000265036 ITGAEP38570 1179 aa11.17□□□□□ -0.62
DEPDC1B-201ENST00000265036 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
DEPDC1B-201ENST00000265036 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
DEPDC1B-201ENST00000265036 CHIC2Q9UKJ5 165 aa11.16□□□□□ -0.62
DEPDC1B-201ENST00000265036 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
DEPDC1B-201ENST00000265036 MADDQ8WXG6 1647 aa11.16□□□□□ -0.62
DEPDC1B-201ENST00000265036 BCORL1Q5H9F3 1711 aa11.16□□□□□ -0.62
DEPDC1B-201ENST00000265036 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.62
DEPDC1B-201ENST00000265036 ABCC5O15440 1437 aa11.15□□□□□ -0.63
DEPDC1B-201ENST00000265036 DAPK1P53355 1430 aa11.15□□□□□ -0.63
DEPDC1B-201ENST00000265036 TSPY4P0CV99 314 aa11.14□□□□□ -0.63
DEPDC1B-201ENST00000265036 TSPY10P0CW01 314 aa11.14□□□□□ -0.63
DEPDC1B-201ENST00000265036 RIMS1Q86UR5 1692 aaKnown RBP11.13□□□□□ -0.63
DEPDC1B-201ENST00000265036 A2MP01023 1474 aa11.13□□□□□ -0.63
DEPDC1B-201ENST00000265036 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
DEPDC1B-201ENST00000265036 PLXNC1O60486 1568 aa11.12□□□□□ -0.63
DEPDC1B-201ENST00000265036 AEBP2Q6ZN18 517 aaPredicted RBP11.12□□□□□ -0.63
DEPDC1B-201ENST00000265036 ADAMTSL3P82987 1691 aa11.12□□□□□ -0.63
DEPDC1B-201ENST00000265036 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
DEPDC1B-201ENST00000265036 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
DEPDC1B-201ENST00000265036 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
DEPDC1B-201ENST00000265036 RRP7BPQ9NSQ0 103 aa11.1□□□□□ -0.63
DEPDC1B-201ENST00000265036 RTEL1-TNFRSF6BF6WH68 1400 aa11.1□□□□□ -0.63
DEPDC1B-201ENST00000265036 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
DEPDC1B-201ENST00000265036 KIF15Q9NS87 1388 aa11.09□□□□□ -0.63
DEPDC1B-201ENST00000265036 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
DEPDC1B-201ENST00000265036 GGT6Q6P531 493 aa11.09□□□□□ -0.63
DEPDC1B-201ENST00000265036 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
DEPDC1B-201ENST00000265036 KIF3BO15066 747 aa11.08□□□□□ -0.64
DEPDC1B-201ENST00000265036 AGLP35573 1532 aa11.07□□□□□ -0.64
DEPDC1B-201ENST00000265036 PTPRMP28827 1452 aa11.07□□□□□ -0.64
DEPDC1B-201ENST00000265036 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
DEPDC1B-201ENST00000265036 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
DEPDC1B-201ENST00000265036 CEBPAP49715 358 aaPredicted RBP11.06□□□□□ -0.64
DEPDC1B-201ENST00000265036 ANKRD30AQ9BXX3 1397 aa11.05□□□□□ -0.64
DEPDC1B-201ENST00000265036 NCOA1Q15788 1441 aa11.04□□□□□ -0.64
DEPDC1B-201ENST00000265036 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
DEPDC1B-201ENST00000265036 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
DEPDC1B-201ENST00000265036 ADGRL2O95490 1459 aa11.03□□□□□ -0.64
DEPDC1B-201ENST00000265036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.641e-6■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms