RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 UBE2Q2Q8WVN8 375 aa20.85■□□□□ 0.93
PRPF40B-201ENST00000261897 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
PRPF40B-201ENST00000261897 FMN1Q68DA7 1419 aa20.81■□□□□ 0.92
PRPF40B-201ENST00000261897 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
PRPF40B-201ENST00000261897 ARID3AQ99856 593 aa20.78■□□□□ 0.92
PRPF40B-201ENST00000261897 PKNOX2Q96KN3 472 aa20.77■□□□□ 0.91
PRPF40B-201ENST00000261897 PNISRQ8TF01 805 aaKnown RBP20.76■□□□□ 0.91
PRPF40B-201ENST00000261897 IGF1RP08069 1367 aa20.75■□□□□ 0.91
PRPF40B-201ENST00000261897 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-201ENST00000261897 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.91
PRPF40B-201ENST00000261897 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
PRPF40B-201ENST00000261897 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
PRPF40B-201ENST00000261897 C20orf194Q5TEA3 1177 aa20.73■□□□□ 0.91
PRPF40B-201ENST00000261897 RSPH6AQ9H0K4 717 aa20.73■□□□□ 0.91
PRPF40B-201ENST00000261897 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
PRPF40B-201ENST00000261897 POGKQ9P215 609 aa20.73■□□□□ 0.91
PRPF40B-201ENST00000261897 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
PRPF40B-201ENST00000261897 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
PRPF40B-201ENST00000261897 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
PRPF40B-201ENST00000261897 WDR43Q15061 677 aaKnown RBP eCLIP20.7■□□□□ 0.9
PRPF40B-201ENST00000261897 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
PRPF40B-201ENST00000261897 PTPRKQ15262 1439 aa20.68■□□□□ 0.9
PRPF40B-201ENST00000261897 MS4A1P11836 297 aa20.68■□□□□ 0.9
PRPF40B-201ENST00000261897 PKD2Q13563 968 aa20.68■□□□□ 0.9
PRPF40B-201ENST00000261897 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
PRPF40B-201ENST00000261897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.9
PRPF40B-201ENST00000261897 USP47Q96K76 1375 aa20.66■□□□□ 0.9
PRPF40B-201ENST00000261897 UPF2Q9HAU5 1272 aaKnown RBP20.65■□□□□ 0.9
PRPF40B-201ENST00000261897 HSP90AA2PQ14568 343 aaPredicted RBP20.64■□□□□ 0.89
PRPF40B-201ENST00000261897 FAM161AQ3B820 660 aa20.64■□□□□ 0.89
PRPF40B-201ENST00000261897 BECN1Q14457 450 aa20.64■□□□□ 0.89
PRPF40B-201ENST00000261897 ZNF644Q9H582 1327 aaPredicted RBP20.64■□□□□ 0.89
PRPF40B-201ENST00000261897 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
PRPF40B-201ENST00000261897 CCDC146Q8IYE0 955 aa20.63■□□□□ 0.89
PRPF40B-201ENST00000261897 NAIPQ13075 1403 aa20.62■□□□□ 0.89
PRPF40B-201ENST00000261897 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-201ENST00000261897 WASHC2CQ9Y4E1 1318 aa20.62■□□□□ 0.89
PRPF40B-201ENST00000261897 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
PRPF40B-201ENST00000261897 MYBBP1AQ9BQG0 1328 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-201ENST00000261897 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
PRPF40B-201ENST00000261897 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
PRPF40B-201ENST00000261897 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
PRPF40B-201ENST00000261897 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
PRPF40B-201ENST00000261897 NCOA1Q15788 1441 aa20.56■□□□□ 0.88
PRPF40B-201ENST00000261897 FAM43AQ8N2R8 423 aa20.55■□□□□ 0.88
PRPF40B-201ENST00000261897 CFTRP13569 1480 aa20.55■□□□□ 0.88
PRPF40B-201ENST00000261897 CUX1P39880 1505 aa20.54■□□□□ 0.88
PRPF40B-201ENST00000261897 GOLGA6L3A6NEY3 463 aa20.53■□□□□ 0.88
PRPF40B-201ENST00000261897 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
PRPF40B-201ENST00000261897 RALBP1Q15311 655 aa20.52■□□□□ 0.88
PRPF40B-201ENST00000261897 L1TD1Q5T7N2 865 aaKnown RBP20.52■□□□□ 0.88
PRPF40B-201ENST00000261897 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
PRPF40B-201ENST00000261897 TNNT2P45379 298 aaPredicted RBP20.52■□□□□ 0.87
PRPF40B-201ENST00000261897 ZMYND15Q9H091 742 aa20.52■□□□□ 0.87
PRPF40B-201ENST00000261897 CENPQQ7L2Z9 268 aaPredicted RBP20.51■□□□□ 0.87
PRPF40B-201ENST00000261897 RRAGDQ9NQL2 400 aaPredicted RBP20.51■□□□□ 0.87
PRPF40B-201ENST00000261897 FOXD4L1Q9NU39 408 aa20.51■□□□□ 0.87
PRPF40B-201ENST00000261897 BCL2L13Q9BXK5 485 aa20.5■□□□□ 0.87
PRPF40B-201ENST00000261897 KIF15Q9NS87 1388 aa20.5■□□□□ 0.87
PRPF40B-201ENST00000261897 CFDP1Q9UEE9 299 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-201ENST00000261897 PCF11O94913 1555 aaKnown RBP20.49■□□□□ 0.87
PRPF40B-201ENST00000261897 FBLN2P98095 1184 aa20.48■□□□□ 0.87
PRPF40B-201ENST00000261897 PANK2Q9BZ23 570 aa20.48■□□□□ 0.87
PRPF40B-201ENST00000261897 COG6Q9Y2V7 657 aa20.47■□□□□ 0.87
PRPF40B-201ENST00000261897 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
PRPF40B-201ENST00000261897 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
PRPF40B-201ENST00000261897 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
PRPF40B-201ENST00000261897 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
PRPF40B-201ENST00000261897 PANK3Q9H999 370 aa20.46■□□□□ 0.87
PRPF40B-201ENST00000261897 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
PRPF40B-201ENST00000261897 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
PRPF40B-201ENST00000261897 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
PRPF40B-201ENST00000261897 KNSTRNQ9Y448 316 aa20.44■□□□□ 0.86
PRPF40B-201ENST00000261897 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
PRPF40B-201ENST00000261897 RNF123Q5XPI4 1314 aa20.43■□□□□ 0.86
PRPF40B-201ENST00000261897 BCAR3O75815 825 aa20.43■□□□□ 0.86
PRPF40B-201ENST00000261897 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
PRPF40B-201ENST00000261897 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
PRPF40B-201ENST00000261897 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
PRPF40B-201ENST00000261897 TPRNQ4KMQ1 711 aa20.41■□□□□ 0.86
PRPF40B-201ENST00000261897 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
PRPF40B-201ENST00000261897 MAP3K1Q13233 1512 aa20.4■□□□□ 0.86
PRPF40B-201ENST00000261897 SEC24BO95487 1268 aa20.38■□□□□ 0.85
PRPF40B-201ENST00000261897 C8orf34Q49A92 452 aa20.38■□□□□ 0.85
PRPF40B-201ENST00000261897 RRP7AQ9Y3A4 280 aaKnown RBP20.38■□□□□ 0.85
PRPF40B-201ENST00000261897 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
PRPF40B-201ENST00000261897 PTPN23Q9H3S7 1636 aa20.38■□□□□ 0.85
PRPF40B-201ENST00000261897 ANP32BQ92688 251 aaKnown RBP20.38■□□□□ 0.85
PRPF40B-201ENST00000261897 APAF1O14727 1248 aa20.37■□□□□ 0.85
PRPF40B-201ENST00000261897 A0A0U1RQG5 324 aaPredicted RBP20.37■□□□□ 0.85
PRPF40B-201ENST00000261897 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
PRPF40B-201ENST00000261897 DHX29Q7Z478 1369 aaKnown RBP20.36■□□□□ 0.85
PRPF40B-201ENST00000261897 NUP155O75694 1391 aa20.36■□□□□ 0.85
PRPF40B-201ENST00000261897 NBPF1Q3BBV0 1214 aa20.36■□□□□ 0.85
PRPF40B-201ENST00000261897 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
PRPF40B-201ENST00000261897 RBM10P98175 930 aaKnown RBP20.34■□□□□ 0.85
PRPF40B-201ENST00000261897 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
PRPF40B-201ENST00000261897 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
PRPF40B-201ENST00000261897 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
PRPF40B-201ENST00000261897 ANKRD30BQ9BXX2 1392 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms