RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 MORC1Q86VD1 984 aa28.56■■■□□ 2.16
TTC9-201ENST00000256367 RSPH4AQ5TD94 716 aa28.54■■■□□ 2.16
TTC9-201ENST00000256367 STK26Q9P289 416 aa28.54■■■□□ 2.16
TTC9-201ENST00000256367 ROCK2O75116 1388 aaKnown RBP28.54■■■□□ 2.16
TTC9-201ENST00000256367 KIF3BO15066 747 aa28.53■■■□□ 2.16
TTC9-201ENST00000256367 ARXQ96QS3 562 aa28.51■■■□□ 2.15
TTC9-201ENST00000256367 KTN1Q86UP2 1357 aaKnown RBP28.48■■■□□ 2.15
TTC9-201ENST00000256367 SPAG9O60271 1321 aaKnown RBP28.47■■■□□ 2.15
TTC9-201ENST00000256367 MS4A1P11836 297 aa28.47■■■□□ 2.15
TTC9-201ENST00000256367 L3MBTL2Q969R5 705 aa28.46■■■□□ 2.15
TTC9-201ENST00000256367 CHMP4BQ9H444 224 aaKnown RBP28.45■■■□□ 2.14
TTC9-201ENST00000256367 SOX12O15370 315 aa28.44■■■□□ 2.14
TTC9-201ENST00000256367 RGS3P49796 1198 aa28.43■■■□□ 2.14
TTC9-201ENST00000256367 CASC1Q6TDU7 716 aa28.43■■■□□ 2.14
TTC9-201ENST00000256367 HDGFL2Q7Z4V5 671 aaPredicted RBP28.42■■■□□ 2.14
TTC9-201ENST00000256367 B4GALNT3Q6L9W6 998 aa28.37■■■□□ 2.13
TTC9-201ENST00000256367 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
TTC9-201ENST00000256367 RALBP1Q15311 655 aa28.36■■■□□ 2.13
TTC9-201ENST00000256367 IGF1RP08069 1367 aa28.35■■■□□ 2.13
TTC9-201ENST00000256367 PTPRGP23470 1445 aa28.34■■■□□ 2.13
TTC9-201ENST00000256367 EIF3AQ14152 1382 aaKnown RBP28.33■■■□□ 2.13
TTC9-201ENST00000256367 WASHC2CQ9Y4E1 1318 aa28.32■■■□□ 2.12
TTC9-201ENST00000256367 GOLGA6L22H0YM25 854 aa28.31■■■□□ 2.12
TTC9-201ENST00000256367 GAPVD1Q14C86 1478 aa28.31■■■□□ 2.12
TTC9-201ENST00000256367 NCLP19338 710 aaKnown RBP28.31■■■□□ 2.12
TTC9-201ENST00000256367 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
TTC9-201ENST00000256367 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
TTC9-201ENST00000256367 DHX57Q6P158 1386 aaKnown RBP28.26■■■□□ 2.11
TTC9-201ENST00000256367 U2AF1L5P0DN76 240 aaPredicted RBP28.25■■■□□ 2.11
TTC9-201ENST00000256367 U2AF1Q01081 240 aaKnown RBP eCLIP28.25■■■□□ 2.11
TTC9-201ENST00000256367 ANP32EQ9BTT0 268 aa28.24■■■□□ 2.11
TTC9-201ENST00000256367 OS9Q13438 667 aaPredicted RBP28.24■■■□□ 2.11
TTC9-201ENST00000256367 RTF1Q92541 710 aaKnown RBP28.23■■■□□ 2.11
TTC9-201ENST00000256367 NUTM2DQ5VT03 806 aaPredicted RBP28.2■■■□□ 2.1
TTC9-201ENST00000256367 PAK3O75914 559 aaPredicted RBP28.17■■■□□ 2.1
TTC9-201ENST00000256367 CCDC144AA2RUR9 1427 aa28.17■■■□□ 2.1
TTC9-201ENST00000256367 TERF2IPQ9NYB0 399 aa28.16■■■□□ 2.1
TTC9-201ENST00000256367 RCAN3Q9UKA8 241 aa28.14■■■□□ 2.09
TTC9-201ENST00000256367 EID1Q9Y6B2 187 aa28.12■■■□□ 2.09
TTC9-201ENST00000256367 GLIPR1L2Q4G1C9 344 aa28.12■■■□□ 2.09
TTC9-201ENST00000256367 IPO8O15397 1037 aaKnown RBP28.11■■■□□ 2.09
TTC9-201ENST00000256367 CALD1Q05682 793 aaKnown RBP28.11■■■□□ 2.09
TTC9-201ENST00000256367 NLRP13Q86W25 1043 aa28.11■■■□□ 2.09
TTC9-201ENST00000256367 NPHP1O15259 732 aa28.09■■■□□ 2.09
TTC9-201ENST00000256367 ST20-MTHFSA0A0A6YYL1 179 aa28.09■■■□□ 2.09
TTC9-201ENST00000256367 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
TTC9-201ENST00000256367 TRAK1Q9UPV9 953 aa28.08■■■□□ 2.09
TTC9-201ENST00000256367 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.08
TTC9-201ENST00000256367 ERICH6BQ5W0A0 696 aa28.05■■■□□ 2.08
TTC9-201ENST00000256367 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
TTC9-201ENST00000256367 NOP58Q9Y2X3 529 aaKnown RBP28.04■■■□□ 2.08
TTC9-201ENST00000256367 TRIM44Q96DX7 344 aaPredicted RBP28.03■■■□□ 2.08
TTC9-201ENST00000256367 KCNJ4P48050 445 aa28.02■■■□□ 2.08
TTC9-201ENST00000256367 MYOM3Q5VTT5 1437 aa28.02■■■□□ 2.08
TTC9-201ENST00000256367 HSP90AB1P08238 724 aaKnown RBP28.02■■■□□ 2.08
TTC9-201ENST00000256367 UACAQ9BZF9 1416 aa28.01■■■□□ 2.07
TTC9-201ENST00000256367 KIF15Q9NS87 1388 aa27.99■■■□□ 2.07
TTC9-201ENST00000256367 CSB-PGBD3P0DP91 1061 aa27.99■■■□□ 2.07
TTC9-201ENST00000256367 ZRSR1Q15695 479 aaKnown RBP27.99■■■□□ 2.07
TTC9-201ENST00000256367 GOLGA2Q08379 1002 aa27.99■■■□□ 2.07
TTC9-201ENST00000256367 KIF21BO75037 1637 aa27.98■■■□□ 2.07
TTC9-201ENST00000256367 TPRNQ4KMQ1 711 aa27.98■■■□□ 2.07
TTC9-201ENST00000256367 FGD6Q6ZV73 1430 aa27.98■■■□□ 2.07
TTC9-201ENST00000256367 FGD1P98174 961 aa27.98■■■□□ 2.07
TTC9-201ENST00000256367 NGDNQ8NEJ9 315 aaKnown RBP27.97■■■□□ 2.07
TTC9-201ENST00000256367 CCDC146Q8IYE0 955 aa27.96■■■□□ 2.07
TTC9-201ENST00000256367 VGFO15240 615 aaPredicted RBP27.96■■■□□ 2.07
TTC9-201ENST00000256367 PANK3Q9H999 370 aa27.96■■■□□ 2.07
TTC9-201ENST00000256367 ITPRIPQ8IWB1 547 aa27.95■■■□□ 2.07
TTC9-201ENST00000256367 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
TTC9-201ENST00000256367 ZNF644Q9H582 1327 aaPredicted RBP27.94■■■□□ 2.06
TTC9-201ENST00000256367 CFTRP13569 1480 aa27.93■■■□□ 2.06
TTC9-201ENST00000256367 MYBBP1AQ9BQG0 1328 aaKnown RBP27.93■■■□□ 2.06
TTC9-201ENST00000256367 PDE3BQ13370 1112 aa27.92■■■□□ 2.06
TTC9-201ENST00000256367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.92■■■□□ 2.06
TTC9-201ENST00000256367 RWDD1Q9H446 243 aaPredicted RBP27.92■■■□□ 2.06
TTC9-201ENST00000256367 CUX1P39880 1505 aa27.92■■■□□ 2.06
TTC9-201ENST00000256367 HSCBQ8IWL3 235 aa27.91■■■□□ 2.06
TTC9-201ENST00000256367 USP47Q96K76 1375 aa27.91■■■□□ 2.06
TTC9-201ENST00000256367 APBB1O00213 710 aa27.9■■■□□ 2.06
TTC9-201ENST00000256367 NUTM2FA1L443 756 aa27.9■■■□□ 2.06
TTC9-201ENST00000256367 CFAP44Q96MT7 982 aa27.89■■■□□ 2.06
TTC9-201ENST00000256367 LRRC9Q6ZRR7 1453 aa27.89■■■□□ 2.06
TTC9-201ENST00000256367 CDK11BP21127 795 aaKnown RBP27.89■■■□□ 2.06
TTC9-201ENST00000256367 SMC4Q9NTJ3 1288 aa27.88■■■□□ 2.05
TTC9-201ENST00000256367 GRIN2BQ13224 1484 aa27.87■■■□□ 2.05
TTC9-201ENST00000256367 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
TTC9-201ENST00000256367 MCCP23508 829 aa27.87■■■□□ 2.05
TTC9-201ENST00000256367 PTMAP06454 111 aaKnown RBP27.86■■■□□ 2.05
TTC9-201ENST00000256367 CHMP4AQ9BY43 222 aa27.86■■■□□ 2.05
TTC9-201ENST00000256367 STK31Q9BXU1 1019 aa27.86■■■□□ 2.05
TTC9-201ENST00000256367 AMPHP49418 695 aa27.85■■■□□ 2.05
TTC9-201ENST00000256367 PRKRIP1Q9H875 184 aaPredicted RBP27.85■■■□□ 2.05
TTC9-201ENST00000256367 NAP1L2Q9ULW6 460 aaPredicted RBP27.85■■■□□ 2.05
TTC9-201ENST00000256367 TAOK2Q9UL54 1235 aa27.84■■■□□ 2.05
TTC9-201ENST00000256367 EVC2Q86UK5 1308 aa27.83■■■□□ 2.05
TTC9-201ENST00000256367 RBM19Q9Y4C8 960 aaKnown RBP27.83■■■□□ 2.05
TTC9-201ENST00000256367 LMOD3Q0VAK6 560 aa27.83■■■□□ 2.04
TTC9-201ENST00000256367 CENPJQ9HC77 1338 aaPredicted RBP27.82■■■□□ 2.04
TTC9-201ENST00000256367 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms