RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 ITSN2Q9NZM3 1697 aa35.41■■■■□ 3.26
APOE-201ENST00000252486 EFCAB2Q5VUJ9 269 aa35.41■■■■□ 3.26
APOE-201ENST00000252486 FANCAO15360 1455 aa35.41■■■■□ 3.26
APOE-201ENST00000252486 ARHGAP5Q13017 1502 aa35.39■■■■□ 3.26
APOE-201ENST00000252486 CDC42BPBQ9Y5S2 1711 aa35.38■■■■□ 3.25
APOE-201ENST00000252486 CFDP1Q9UEE9 299 aaPredicted RBP35.33■■■■□ 3.25
APOE-201ENST00000252486 AKNAQ7Z591 1439 aa35.32■■■■□ 3.24
APOE-201ENST00000252486 MYOM3Q5VTT5 1437 aa35.3■■■■□ 3.24
APOE-201ENST00000252486 MIA2Q96PC5 1412 aa35.25■■■■□ 3.23
APOE-201ENST00000252486 KDM6BO15054 1643 aa35.24■■■■□ 3.23
APOE-201ENST00000252486 ADGRL1O94910 1474 aa35.22■■■■□ 3.23
APOE-201ENST00000252486 PLEKHH2Q8IVE3 1493 aa35.22■■■■□ 3.23
APOE-201ENST00000252486 PPARGC1BQ86YN6 1023 aaKnown RBP35.22■■■■□ 3.23
APOE-201ENST00000252486 ZNF777Q9ULD5 760 aaPredicted RBP35.21■■■■□ 3.23
APOE-201ENST00000252486 SAMD9LQ8IVG5 1584 aa35.18■■■■□ 3.22
APOE-201ENST00000252486 ABCC1P33527 1531 aa35.17■■■■□ 3.22
APOE-201ENST00000252486 SCAPERQ9BY12 1400 aa35.17■■■■□ 3.22
APOE-201ENST00000252486 DENND4BO75064 1496 aaPredicted RBP35.16■■■■□ 3.22
APOE-201ENST00000252486 KIAA1107Q9UPP5 1409 aa35.15■■■■□ 3.22
APOE-201ENST00000252486 COL17A1Q9UMD9 1497 aaPredicted RBP35.14■■■■□ 3.22
APOE-201ENST00000252486 FGD6Q6ZV73 1430 aa35.14■■■■□ 3.22
APOE-201ENST00000252486 CAMSAP2Q08AD1 1489 aa35.11■■■■□ 3.21
APOE-201ENST00000252486 POGZQ7Z3K3 1410 aa35.08■■■■□ 3.21
APOE-201ENST00000252486 ZNF644Q9H582 1327 aaPredicted RBP35.07■■■■□ 3.21
APOE-201ENST00000252486 PTPN23Q9H3S7 1636 aa35.07■■■■□ 3.21
APOE-201ENST00000252486 SYCP2Q9BX26 1530 aa35.06■■■■□ 3.2
APOE-201ENST00000252486 ZNF518AQ6AHZ1 1483 aa35.06■■■■□ 3.2
APOE-201ENST00000252486 RICTORQ6R327 1708 aa35.06■■■■□ 3.2
APOE-201ENST00000252486 ARHGEF12Q9NZN5 1544 aa35.05■■■■□ 3.2
APOE-201ENST00000252486 TCOF1Q13428 1488 aaKnown RBP35.04■■■■□ 3.2
APOE-201ENST00000252486 RAPGEF3O95398 923 aa35.04■■■■□ 3.2
APOE-201ENST00000252486 RSPH4AQ5TD94 716 aa35.03■■■■□ 3.2
APOE-201ENST00000252486 HNRNPMP52272 730 aaKnown RBP eCLIP35.02■■■■□ 3.2
APOE-201ENST00000252486 FRMPD1Q5SYB0 1578 aa35.02■■■■□ 3.2
APOE-201ENST00000252486 MBD5Q9P267 1494 aa35■■■■□ 3.19
APOE-201ENST00000252486 TRAPPC8Q9Y2L5 1435 aa34.99■■■■□ 3.19
APOE-201ENST00000252486 ARHGEF5Q12774 1597 aa34.98■■■■□ 3.19
APOE-201ENST00000252486 ZMYM4Q5VZL5 1548 aa34.97■■■■□ 3.19
APOE-201ENST00000252486 KDM5CP41229 1560 aa34.96■■■■□ 3.19
APOE-201ENST00000252486 AFAP1Q8N556 730 aa34.95■■■■□ 3.19
APOE-201ENST00000252486 CCDC141Q6ZP82 1450 aa34.94■■■■□ 3.18
APOE-201ENST00000252486 MAGI2Q86UL8 1455 aa34.94■■■■□ 3.18
APOE-201ENST00000252486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.92■■■■□ 3.18
APOE-201ENST00000252486 RRBP1Q9P2E9 1410 aaKnown RBP34.91■■■■□ 3.18
APOE-201ENST00000252486 FAM50AQ14320 339 aaKnown RBP34.9■■■■□ 3.18
APOE-201ENST00000252486 MLH3Q9UHC1 1453 aa34.89■■■■□ 3.18
APOE-201ENST00000252486 HECW2Q9P2P5 1572 aa34.87■■■■□ 3.17
APOE-201ENST00000252486 SPAG9O60271 1321 aaKnown RBP34.87■■■■□ 3.17
APOE-201ENST00000252486 TSPY4P0CV99 314 aa34.86■■■■□ 3.17
APOE-201ENST00000252486 TSPY10P0CW01 314 aa34.86■■■■□ 3.17
APOE-201ENST00000252486 DNMT1P26358 1616 aaKnown RBP34.84■■■■□ 3.17
APOE-201ENST00000252486 MYT1LQ9UL68 1186 aa34.83■■■■□ 3.17
APOE-201ENST00000252486 ZFYVE16Q7Z3T8 1539 aa34.82■■■■□ 3.16
APOE-201ENST00000252486 RTEL1-TNFRSF6BF6WH68 1400 aa34.81■■■■□ 3.16
APOE-201ENST00000252486 DAPK1P53355 1430 aa34.81■■■■□ 3.16
APOE-201ENST00000252486 ARHGEF40Q8TER5 1519 aa34.8■■■■□ 3.16
APOE-201ENST00000252486 ABCC5O15440 1437 aa34.8■■■■□ 3.16
APOE-201ENST00000252486 INO80Q9ULG1 1556 aaPredicted RBP34.79■■■■□ 3.16
APOE-201ENST00000252486 MAST1Q9Y2H9 1570 aa34.79■■■■□ 3.16
APOE-201ENST00000252486 SHANK2Q9UPX8 1470 aa34.78■■■■□ 3.16
APOE-201ENST00000252486 ATP7AQ04656 1500 aa34.78■■■■□ 3.16
APOE-201ENST00000252486 CROCC2H7BZ55 1655 aa34.77■■■■□ 3.16
APOE-201ENST00000252486 KIDINS220Q9ULH0 1771 aa34.77■■■■□ 3.16
APOE-201ENST00000252486 C9orf84Q5VXU9 1444 aa34.74■■■■□ 3.15
APOE-201ENST00000252486 YEATS2Q9ULM3 1422 aa34.73■■■■□ 3.15
APOE-201ENST00000252486 ATP10AO60312 1499 aa34.7■■■■□ 3.15
APOE-201ENST00000252486 DIP2CQ9Y2E4 1556 aa34.69■■■■□ 3.14
APOE-201ENST00000252486 ABCA6Q8N139 1617 aa34.68■■■■□ 3.14
APOE-201ENST00000252486 PLXNC1O60486 1568 aa34.64■■■■□ 3.14
APOE-201ENST00000252486 REREQ9P2R6 1566 aa34.64■■■■□ 3.14
APOE-201ENST00000252486 ADGBQ8N7X0 1667 aa34.63■■■■□ 3.13
APOE-201ENST00000252486 ANKRD30AQ9BXX3 1397 aa34.62■■■■□ 3.13
APOE-201ENST00000252486 ADGRL2O95490 1459 aa34.61■■■■□ 3.13
APOE-201ENST00000252486 ITGAEP38570 1179 aa34.59■■■■□ 3.13
APOE-201ENST00000252486 CHIC2Q9UKJ5 165 aa34.58■■■■□ 3.13
APOE-201ENST00000252486 A2MP01023 1474 aa34.58■■■■□ 3.13
APOE-201ENST00000252486 PTPRKQ15262 1439 aa34.57■■■■□ 3.13
APOE-201ENST00000252486 ROCK1Q13464 1354 aa34.56■■■■□ 3.12
APOE-201ENST00000252486 NCOA1Q15788 1441 aa34.55■■■■□ 3.12
APOE-201ENST00000252486 DHX29Q7Z478 1369 aaKnown RBP34.53■■■■□ 3.12
APOE-201ENST00000252486 KIF15Q9NS87 1388 aa34.53■■■■□ 3.12
APOE-201ENST00000252486 AGLP35573 1532 aa34.52■■■■□ 3.12
APOE-201ENST00000252486 DUOX2Q9NRD8 1548 aa34.52■■■■□ 3.12
APOE-201ENST00000252486 RRP7BPQ9NSQ0 103 aa34.5■■■■□ 3.11
APOE-201ENST00000252486 ARID4BQ4LE39 1312 aaPredicted RBP34.49■■■■□ 3.11
APOE-201ENST00000252486 ERBINQ96RT1 1412 aa34.43■■■■□ 3.1
APOE-201ENST00000252486 SIGLEC1Q9BZZ2 1709 aa34.43■■■■□ 3.1
APOE-201ENST00000252486 EIF2AK4Q9P2K8 1649 aaKnown RBP34.41■■■■□ 3.1
APOE-201ENST00000252486 BCORL1Q5H9F3 1711 aa34.38■■■■□ 3.09
APOE-201ENST00000252486 ANKRD50Q9ULJ7 1429 aa34.36■■■■□ 3.09
APOE-201ENST00000252486 KIF3BO15066 747 aa34.34■■■■□ 3.09
APOE-201ENST00000252486 HFM1A2PYH4 1435 aa34.32■■■■□ 3.08
APOE-201ENST00000252486 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
APOE-201ENST00000252486 GCC2Q8IWJ2 1684 aa34.3■■■■□ 3.08
APOE-201ENST00000252486 NAIPQ13075 1403 aa34.3■■■■□ 3.08
APOE-201ENST00000252486 MLECQ14165 292 aa34.28■■■■□ 3.08
APOE-201ENST00000252486 PPP6R1Q9UPN7 881 aa34.28■■■■□ 3.08
APOE-201ENST00000252486 RNF17Q9BXT8 1623 aaKnown RBP34.27■■■■□ 3.08
APOE-201ENST00000252486 GGT6Q6P531 493 aa34.25■■■■□ 3.07
APOE-201ENST00000252486 ADAMTSL3P82987 1691 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms