RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
CCDC117-201ENST00000249064 PKD2Q13563 968 aa17.58■□□□□ 0.4
CCDC117-201ENST00000249064 PKNOX2Q96KN3 472 aa17.58■□□□□ 0.4
CCDC117-201ENST00000249064 CASKIN1Q8WXD9 1431 aa17.58■□□□□ 0.4
CCDC117-201ENST00000249064 RGS3P49796 1198 aa17.57■□□□□ 0.4
CCDC117-201ENST00000249064 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
CCDC117-201ENST00000249064 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
CCDC117-201ENST00000249064 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
CCDC117-201ENST00000249064 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
CCDC117-201ENST00000249064 ARID3AQ99856 593 aa17.54■□□□□ 0.4
CCDC117-201ENST00000249064 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.46e-7■■■□□ 15.2
CCDC117-201ENST00000249064 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
CCDC117-201ENST00000249064 GSE1Q14687 1217 aa17.53■□□□□ 0.4
CCDC117-201ENST00000249064 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
CCDC117-201ENST00000249064 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
CCDC117-201ENST00000249064 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
CCDC117-201ENST00000249064 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
CCDC117-201ENST00000249064 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
CCDC117-201ENST00000249064 C11orf95C9JLR9 678 aaPredicted RBP17.52■□□□□ 0.39
CCDC117-201ENST00000249064 PTPRKQ15262 1439 aa17.51■□□□□ 0.39
CCDC117-201ENST00000249064 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
CCDC117-201ENST00000249064 NBPF8Q3BBV2 869 aa17.51■□□□□ 0.39
CCDC117-201ENST00000249064 GZF1Q9H116 711 aaPredicted RBP17.49■□□□□ 0.39
CCDC117-201ENST00000249064 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
CCDC117-201ENST00000249064 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
CCDC117-201ENST00000249064 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
CCDC117-201ENST00000249064 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
CCDC117-201ENST00000249064 NAIPQ13075 1403 aa17.47■□□□□ 0.39
CCDC117-201ENST00000249064 PDE4AP27815 886 aa17.46■□□□□ 0.39
CCDC117-201ENST00000249064 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
CCDC117-201ENST00000249064 SLKQ9H2G2 1235 aaPredicted RBP17.46■□□□□ 0.38
CCDC117-201ENST00000249064 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
CCDC117-201ENST00000249064 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
CCDC117-201ENST00000249064 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC117-201ENST00000249064 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
CCDC117-201ENST00000249064 KIF7Q2M1P5 1343 aa17.42■□□□□ 0.38
CCDC117-201ENST00000249064 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
CCDC117-201ENST00000249064 HSP90AA1P07900 732 aaKnown RBP17.41■□□□□ 0.38
CCDC117-201ENST00000249064 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
CCDC117-201ENST00000249064 NUP155O75694 1391 aa17.41■□□□□ 0.38
CCDC117-201ENST00000249064 RSPH6AQ9H0K4 717 aa17.4■□□□□ 0.38
CCDC117-201ENST00000249064 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.38
CCDC117-201ENST00000249064 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
CCDC117-201ENST00000249064 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
CCDC117-201ENST00000249064 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
CCDC117-201ENST00000249064 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
CCDC117-201ENST00000249064 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
CCDC117-201ENST00000249064 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
CCDC117-201ENST00000249064 A0A0U1RQG5 324 aaPredicted RBP17.38■□□□□ 0.37
CCDC117-201ENST00000249064 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
CCDC117-201ENST00000249064 PLIN1O60240 522 aa17.37■□□□□ 0.37
CCDC117-201ENST00000249064 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
CCDC117-201ENST00000249064 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
CCDC117-201ENST00000249064 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
CCDC117-201ENST00000249064 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
CCDC117-201ENST00000249064 MAP3K1Q13233 1512 aa17.35■□□□□ 0.37
CCDC117-201ENST00000249064 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
CCDC117-201ENST00000249064 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
CCDC117-201ENST00000249064 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
CCDC117-201ENST00000249064 JPH4Q96JJ6 628 aa17.34■□□□□ 0.37
CCDC117-201ENST00000249064 CFAP43Q8NDM7 1665 aa17.33■□□□□ 0.36
CCDC117-201ENST00000249064 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.36
CCDC117-201ENST00000249064 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
CCDC117-201ENST00000249064 URB2Q14146 1524 aaKnown RBP17.32■□□□□ 0.36
CCDC117-201ENST00000249064 ZBTB7CA1YPR0 619 aa17.32■□□□□ 0.36
CCDC117-201ENST00000249064 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
CCDC117-201ENST00000249064 USP47Q96K76 1375 aa17.3■□□□□ 0.36
CCDC117-201ENST00000249064 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
CCDC117-201ENST00000249064 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
CCDC117-201ENST00000249064 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
CCDC117-201ENST00000249064 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
CCDC117-201ENST00000249064 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
CCDC117-201ENST00000249064 AKNAQ7Z591 1439 aa17.28■□□□□ 0.36
CCDC117-201ENST00000249064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC117-201ENST00000249064 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
CCDC117-201ENST00000249064 BECN1Q14457 450 aa17.26■□□□□ 0.35
CCDC117-201ENST00000249064 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
CCDC117-201ENST00000249064 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
CCDC117-201ENST00000249064 LRRIQ1Q96JM4 1722 aa17.25■□□□□ 0.35
CCDC117-201ENST00000249064 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
CCDC117-201ENST00000249064 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
CCDC117-201ENST00000249064 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC117-201ENST00000249064 EPRSP07814 1512 aaKnown RBP17.23■□□□□ 0.35
CCDC117-201ENST00000249064 ZMYND15Q9H091 742 aa17.22■□□□□ 0.35
CCDC117-201ENST00000249064 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
CCDC117-201ENST00000249064 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
CCDC117-201ENST00000249064 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
CCDC117-201ENST00000249064 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
CCDC117-201ENST00000249064 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
CCDC117-201ENST00000249064 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
CCDC117-201ENST00000249064 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.19■□□□□ 0.34
CCDC117-201ENST00000249064 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
CCDC117-201ENST00000249064 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
CCDC117-201ENST00000249064 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
CCDC117-201ENST00000249064 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
CCDC117-201ENST00000249064 DAPK1P53355 1430 aa17.17■□□□□ 0.34
CCDC117-201ENST00000249064 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
CCDC117-201ENST00000249064 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
CCDC117-201ENST00000249064 LAMC3Q9Y6N6 1575 aa17.16■□□□□ 0.34
CCDC117-201ENST00000249064 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms