RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 NUDCQ9Y266 331 aa22.7■■□□□ 1.22
SGPP1-201ENST00000247225 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
SGPP1-201ENST00000247225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.69■■□□□ 1.22
SGPP1-201ENST00000247225 PLIN1O60240 522 aa22.65■■□□□ 1.22
SGPP1-201ENST00000247225 EXOC6Q8TAG9 804 aa22.65■■□□□ 1.22
SGPP1-201ENST00000247225 ERICH6BQ5W0A0 696 aa22.65■■□□□ 1.22
SGPP1-201ENST00000247225 CFAP43Q8NDM7 1665 aa22.64■■□□□ 1.22
SGPP1-201ENST00000247225 DCAF11Q8TEB1 546 aa22.64■■□□□ 1.21
SGPP1-201ENST00000247225 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
SGPP1-201ENST00000247225 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
SGPP1-201ENST00000247225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.62■■□□□ 1.21
SGPP1-201ENST00000247225 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
SGPP1-201ENST00000247225 CC2D1BQ5T0F9 858 aaKnown RBP22.62■■□□□ 1.21
SGPP1-201ENST00000247225 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
SGPP1-201ENST00000247225 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
SGPP1-201ENST00000247225 KDM6BO15054 1643 aa22.59■■□□□ 1.21
SGPP1-201ENST00000247225 IPO9Q96P70 1041 aaKnown RBP22.59■■□□□ 1.21
SGPP1-201ENST00000247225 USP47Q96K76 1375 aa22.58■■□□□ 1.21
SGPP1-201ENST00000247225 EFCAB5A4FU69 1503 aa22.58■■□□□ 1.21
SGPP1-201ENST00000247225 NCOA1Q15788 1441 aa22.58■■□□□ 1.21
SGPP1-201ENST00000247225 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
SGPP1-201ENST00000247225 CDCA7LQ96GN5 454 aa22.56■■□□□ 1.2
SGPP1-201ENST00000247225 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
SGPP1-201ENST00000247225 DENND4BO75064 1496 aaPredicted RBP22.54■■□□□ 1.2
SGPP1-201ENST00000247225 MAGI3Q5TCQ9 1506 aa22.53■■□□□ 1.2
SGPP1-201ENST00000247225 PNISRQ8TF01 805 aaKnown RBP22.53■■□□□ 1.2
SGPP1-201ENST00000247225 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
SGPP1-201ENST00000247225 SLC4A3P48751 1232 aa22.53■■□□□ 1.2
SGPP1-201ENST00000247225 NEFMP07197 916 aa22.51■■□□□ 1.19
SGPP1-201ENST00000247225 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
SGPP1-201ENST00000247225 RCAN3Q9UKA8 241 aa22.5■■□□□ 1.19
SGPP1-201ENST00000247225 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
SGPP1-201ENST00000247225 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
SGPP1-201ENST00000247225 NUP155O75694 1391 aa22.47■■□□□ 1.19
SGPP1-201ENST00000247225 SUPT6HQ7KZ85 1726 aaKnown RBP22.47■■□□□ 1.19
SGPP1-201ENST00000247225 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
SGPP1-201ENST00000247225 IL27Q8NEV9 243 aa22.45■■□□□ 1.18
SGPP1-201ENST00000247225 HNRNPMP52272 730 aaKnown RBP eCLIP22.44■■□□□ 1.18
SGPP1-201ENST00000247225 RRP1P56182 461 aaKnown RBP22.44■■□□□ 1.18
SGPP1-201ENST00000247225 EHBP1L1Q8N3D4 1523 aa22.44■■□□□ 1.18
SGPP1-201ENST00000247225 EPRSP07814 1512 aaKnown RBP22.43■■□□□ 1.18
SGPP1-201ENST00000247225 PDE4AP27815 886 aa22.43■■□□□ 1.18
SGPP1-201ENST00000247225 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
SGPP1-201ENST00000247225 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
SGPP1-201ENST00000247225 DAXXQ9UER7 740 aaPredicted RBP22.42■■□□□ 1.18
SGPP1-201ENST00000247225 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
SGPP1-201ENST00000247225 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
SGPP1-201ENST00000247225 ABCC5O15440 1437 aa22.41■■□□□ 1.18
SGPP1-201ENST00000247225 SMG6Q86US8 1419 aaKnown RBP22.41■■□□□ 1.18
SGPP1-201ENST00000247225 DAPK1P53355 1430 aa22.4■■□□□ 1.18
SGPP1-201ENST00000247225 MYT1LQ9UL68 1186 aa22.4■■□□□ 1.18
SGPP1-201ENST00000247225 PRG4Q92954 1404 aaPredicted RBP22.39■■□□□ 1.17
SGPP1-201ENST00000247225 NBPF1Q3BBV0 1214 aa22.39■■□□□ 1.17
SGPP1-201ENST00000247225 RPRD2Q5VT52 1461 aaKnown RBP22.38■■□□□ 1.17
SGPP1-201ENST00000247225 DHX29Q7Z478 1369 aaKnown RBP22.38■■□□□ 1.17
SGPP1-201ENST00000247225 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
SGPP1-201ENST00000247225 ANO8Q9HCE9 1232 aaPredicted RBP22.37■■□□□ 1.17
SGPP1-201ENST00000247225 RGS3P49796 1198 aa22.36■■□□□ 1.17
SGPP1-201ENST00000247225 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.36■■□□□ 1.17
SGPP1-201ENST00000247225 CRBNQ96SW2 442 aa22.36■■□□□ 1.17
SGPP1-201ENST00000247225 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
SGPP1-201ENST00000247225 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
SGPP1-201ENST00000247225 MYBBP1AQ9BQG0 1328 aaKnown RBP22.32■■□□□ 1.16
SGPP1-201ENST00000247225 CTTNBP2Q8WZ74 1663 aa22.32■■□□□ 1.16
SGPP1-201ENST00000247225 C20orf194Q5TEA3 1177 aa22.31■■□□□ 1.16
SGPP1-201ENST00000247225 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
SGPP1-201ENST00000247225 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
SGPP1-201ENST00000247225 CUL7Q14999 1698 aa22.3■■□□□ 1.16
SGPP1-201ENST00000247225 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
SGPP1-201ENST00000247225 PANK3Q9H999 370 aa22.29■■□□□ 1.16
SGPP1-201ENST00000247225 KIF15Q9NS87 1388 aa22.28■■□□□ 1.16
SGPP1-201ENST00000247225 MIA2Q96PC5 1412 aa22.28■■□□□ 1.16
SGPP1-201ENST00000247225 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
SGPP1-201ENST00000247225 NLRP13Q86W25 1043 aa22.26■■□□□ 1.15
SGPP1-201ENST00000247225 TCERG1O14776 1098 aaKnown RBP22.26■■□□□ 1.15
SGPP1-201ENST00000247225 ARXQ96QS3 562 aa22.26■■□□□ 1.15
SGPP1-201ENST00000247225 RALBP1Q15311 655 aa22.26■■□□□ 1.15
SGPP1-201ENST00000247225 ANKRD30AQ9BXX3 1397 aa22.24■■□□□ 1.15
SGPP1-201ENST00000247225 CCDC146Q8IYE0 955 aa22.24■■□□□ 1.15
SGPP1-201ENST00000247225 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
SGPP1-201ENST00000247225 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
SGPP1-201ENST00000247225 KIAA1107Q9UPP5 1409 aa22.22■■□□□ 1.15
SGPP1-201ENST00000247225 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
SGPP1-201ENST00000247225 BACH2Q9BYV9 841 aa22.22■■□□□ 1.15
SGPP1-201ENST00000247225 ANKRD50Q9ULJ7 1429 aa22.21■■□□□ 1.15
SGPP1-201ENST00000247225 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
SGPP1-201ENST00000247225 SAMD9Q5K651 1589 aa22.2■■□□□ 1.14
SGPP1-201ENST00000247225 ADAMTS8Q9UP79 889 aa22.19■■□□□ 1.14
SGPP1-201ENST00000247225 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
SGPP1-201ENST00000247225 RNF123Q5XPI4 1314 aa22.18■■□□□ 1.14
SGPP1-201ENST00000247225 EIF5BO60841 1220 aaKnown RBP22.18■■□□□ 1.14
SGPP1-201ENST00000247225 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
SGPP1-201ENST00000247225 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
SGPP1-201ENST00000247225 BRPF3Q9ULD4 1205 aa22.16■■□□□ 1.14
SGPP1-201ENST00000247225 ROCK1Q13464 1354 aa22.16■■□□□ 1.14
SGPP1-201ENST00000247225 PZPP20742 1482 aa22.16■■□□□ 1.14
SGPP1-201ENST00000247225 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
SGPP1-201ENST00000247225 PLB1Q6P1J6 1458 aa22.16■■□□□ 1.14
SGPP1-201ENST00000247225 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
SGPP1-201ENST00000247225 ZNF608Q9ULD9 1512 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms