RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
CDKN1A-201ENST00000244741 PTPN23Q9H3S7 1636 aa25.45■■□□□ 1.66
CDKN1A-201ENST00000244741 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
CDKN1A-201ENST00000244741 MYO5CQ9NQX4 1742 aa25.45■■□□□ 1.66
CDKN1A-201ENST00000244741 CD109Q6YHK3 1445 aa25.44■■□□□ 1.66
CDKN1A-201ENST00000244741 DIP2BQ9P265 1576 aa25.44■■□□□ 1.66
CDKN1A-201ENST00000244741 PLCH2O75038 1416 aa25.43■■□□□ 1.66
CDKN1A-201ENST00000244741 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
CDKN1A-201ENST00000244741 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
CDKN1A-201ENST00000244741 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
CDKN1A-201ENST00000244741 CAMSAP2Q08AD1 1489 aa25.39■■□□□ 1.65
CDKN1A-201ENST00000244741 EFCAB2Q5VUJ9 269 aa25.38■■□□□ 1.65
CDKN1A-201ENST00000244741 HNRNPMP52272 730 aaKnown RBP eCLIP25.38■■□□□ 1.65
CDKN1A-201ENST00000244741 TSPOAP1O95153 1857 aa25.36■■□□□ 1.65
CDKN1A-201ENST00000244741 TCOF1Q13428 1488 aaKnown RBP25.35■■□□□ 1.65
CDKN1A-201ENST00000244741 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
CDKN1A-201ENST00000244741 FANCAO15360 1455 aa25.35■■□□□ 1.65
CDKN1A-201ENST00000244741 GLI2P10070 1586 aa25.35■■□□□ 1.65
CDKN1A-201ENST00000244741 SAMD9LQ8IVG5 1584 aa25.35■■□□□ 1.65
CDKN1A-201ENST00000244741 MAP3K4Q9Y6R4 1608 aa25.33■■□□□ 1.65
CDKN1A-201ENST00000244741 CHIC2Q9UKJ5 165 aa25.32■■□□□ 1.64
CDKN1A-201ENST00000244741 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
CDKN1A-201ENST00000244741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.29■■□□□ 1.64
CDKN1A-201ENST00000244741 SYCP2Q9BX26 1530 aa25.28■■□□□ 1.64
CDKN1A-201ENST00000244741 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
CDKN1A-201ENST00000244741 ARAP3Q8WWN8 1544 aa25.26■■□□□ 1.63
CDKN1A-201ENST00000244741 AKNAQ7Z591 1439 aa25.25■■□□□ 1.63
CDKN1A-201ENST00000244741 ABCC5O15440 1437 aa25.24■■□□□ 1.63
CDKN1A-201ENST00000244741 DAPK1P53355 1430 aa25.24■■□□□ 1.63
CDKN1A-201ENST00000244741 ADGRL1O94910 1474 aa25.23■■□□□ 1.63
CDKN1A-201ENST00000244741 MBD5Q9P267 1494 aa25.23■■□□□ 1.63
CDKN1A-201ENST00000244741 AFAP1Q8N556 730 aa25.22■■□□□ 1.63
CDKN1A-201ENST00000244741 SCAPERQ9BY12 1400 aa25.22■■□□□ 1.63
CDKN1A-201ENST00000244741 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
CDKN1A-201ENST00000244741 ABCC1P33527 1531 aa25.21■■□□□ 1.63
CDKN1A-201ENST00000244741 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
CDKN1A-201ENST00000244741 DNMT1P26358 1616 aaKnown RBP25.2■■□□□ 1.62
CDKN1A-201ENST00000244741 RRP7BPQ9NSQ0 103 aa25.19■■□□□ 1.62
CDKN1A-201ENST00000244741 KIAA1107Q9UPP5 1409 aa25.18■■□□□ 1.62
CDKN1A-201ENST00000244741 PLEKHH2Q8IVE3 1493 aa25.18■■□□□ 1.62
CDKN1A-201ENST00000244741 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
CDKN1A-201ENST00000244741 TSPY4P0CV99 314 aa25.17■■□□□ 1.62
CDKN1A-201ENST00000244741 TSPY10P0CW01 314 aa25.17■■□□□ 1.62
CDKN1A-201ENST00000244741 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
CDKN1A-201ENST00000244741 NEO1Q92859 1461 aa25.15■■□□□ 1.62
CDKN1A-201ENST00000244741 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.61
CDKN1A-201ENST00000244741 MYT1LQ9UL68 1186 aa25.13■■□□□ 1.61
CDKN1A-201ENST00000244741 ARHGEF5Q12774 1597 aa25.13■■□□□ 1.61
CDKN1A-201ENST00000244741 TEX14Q8IWB6 1497 aa25.12■■□□□ 1.61
CDKN1A-201ENST00000244741 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
CDKN1A-201ENST00000244741 RSPH4AQ5TD94 716 aa25.11■■□□□ 1.61
CDKN1A-201ENST00000244741 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
CDKN1A-201ENST00000244741 SPAG9O60271 1321 aaKnown RBP25.08■■□□□ 1.61
CDKN1A-201ENST00000244741 DENND4BO75064 1496 aaPredicted RBP25.06■■□□□ 1.6
CDKN1A-201ENST00000244741 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
CDKN1A-201ENST00000244741 COL17A1Q9UMD9 1497 aaPredicted RBP25.04■■□□□ 1.6
CDKN1A-201ENST00000244741 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
CDKN1A-201ENST00000244741 NCOA1Q15788 1441 aa25.03■■□□□ 1.6
CDKN1A-201ENST00000244741 SHANK2Q9UPX8 1470 aa25.03■■□□□ 1.6
CDKN1A-201ENST00000244741 ANKRD30AQ9BXX3 1397 aa25.02■■□□□ 1.6
CDKN1A-201ENST00000244741 NAIPQ13075 1403 aa25.02■■□□□ 1.6
CDKN1A-201ENST00000244741 SETD5Q9C0A6 1442 aa25■■□□□ 1.59
CDKN1A-201ENST00000244741 RAB3GAP2Q9H2M9 1393 aa25■■□□□ 1.59
CDKN1A-201ENST00000244741 HFM1A2PYH4 1435 aa25■■□□□ 1.59
CDKN1A-201ENST00000244741 ROCK1Q13464 1354 aa24.99■■□□□ 1.59
CDKN1A-201ENST00000244741 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
CDKN1A-201ENST00000244741 KIF15Q9NS87 1388 aa24.98■■□□□ 1.59
CDKN1A-201ENST00000244741 ADGRL2O95490 1459 aa24.98■■□□□ 1.59
CDKN1A-201ENST00000244741 RICTORQ6R327 1708 aa24.97■■□□□ 1.59
CDKN1A-201ENST00000244741 ZFYVE16Q7Z3T8 1539 aa24.97■■□□□ 1.59
CDKN1A-201ENST00000244741 KDM6BO15054 1643 aa24.96■■□□□ 1.59
CDKN1A-201ENST00000244741 FRMPD1Q5SYB0 1578 aa24.96■■□□□ 1.59
CDKN1A-201ENST00000244741 ATP7AQ04656 1500 aa24.95■■□□□ 1.58
CDKN1A-201ENST00000244741 KDM5CP41229 1560 aa24.95■■□□□ 1.58
CDKN1A-201ENST00000244741 MAST1Q9Y2H9 1570 aa24.95■■□□□ 1.58
CDKN1A-201ENST00000244741 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
CDKN1A-201ENST00000244741 KIDINS220Q9ULH0 1771 aa24.92■■□□□ 1.58
CDKN1A-201ENST00000244741 RTEL1-TNFRSF6BF6WH68 1400 aa24.91■■□□□ 1.58
CDKN1A-201ENST00000244741 YEATS2Q9ULM3 1422 aa24.9■■□□□ 1.58
CDKN1A-201ENST00000244741 HECW2Q9P2P5 1572 aa24.9■■□□□ 1.58
CDKN1A-201ENST00000244741 GCC2Q8IWJ2 1684 aa24.9■■□□□ 1.58
CDKN1A-201ENST00000244741 ANKRD50Q9ULJ7 1429 aa24.89■■□□□ 1.58
CDKN1A-201ENST00000244741 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.57
CDKN1A-201ENST00000244741 PLXNC1O60486 1568 aa24.87■■□□□ 1.57
CDKN1A-201ENST00000244741 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
CDKN1A-201ENST00000244741 TRIM52Q96A61 297 aa24.86■■□□□ 1.57
CDKN1A-201ENST00000244741 ABCA6Q8N139 1617 aa24.84■■□□□ 1.57
CDKN1A-201ENST00000244741 DUOX2Q9NRD8 1548 aa24.82■■□□□ 1.56
CDKN1A-201ENST00000244741 ZMYM4Q5VZL5 1548 aa24.81■■□□□ 1.56
CDKN1A-201ENST00000244741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.81■■□□□ 1.562e-7■□□□□ 8
CDKN1A-201ENST00000244741 DIP2CQ9Y2E4 1556 aa24.79■■□□□ 1.56
CDKN1A-201ENST00000244741 DHX29Q7Z478 1369 aaKnown RBP24.79■■□□□ 1.56
CDKN1A-201ENST00000244741 KIF3BO15066 747 aa24.78■■□□□ 1.56
CDKN1A-201ENST00000244741 A2MP01023 1474 aa24.78■■□□□ 1.56
CDKN1A-201ENST00000244741 ZNF316A6NFI3 1004 aaPredicted RBP24.77■■□□□ 1.56
CDKN1A-201ENST00000244741 MAGI2Q86UL8 1455 aa24.75■■□□□ 1.55
CDKN1A-201ENST00000244741 ERBINQ96RT1 1412 aa24.75■■□□□ 1.55
CDKN1A-201ENST00000244741 DHX57Q6P158 1386 aaKnown RBP24.72■■□□□ 1.55
CDKN1A-201ENST00000244741 NUP155O75694 1391 aa24.72■■□□□ 1.55
CDKN1A-201ENST00000244741 GGT6Q6P531 493 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms