RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 HSP90AA2PQ14568 343 aaPredicted RBP19.85■□□□□ 0.77
HOXC12-201ENST00000243103 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
HOXC12-201ENST00000243103 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
HOXC12-201ENST00000243103 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
HOXC12-201ENST00000243103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.76
HOXC12-201ENST00000243103 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
HOXC12-201ENST00000243103 POGKQ9P215 609 aa19.82■□□□□ 0.76
HOXC12-201ENST00000243103 NUDCQ9Y266 331 aa19.82■□□□□ 0.76
HOXC12-201ENST00000243103 ZBED9Q6R2W3 1325 aa19.8■□□□□ 0.76
HOXC12-201ENST00000243103 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
HOXC12-201ENST00000243103 LRRC9Q6ZRR7 1453 aa19.78■□□□□ 0.76
HOXC12-201ENST00000243103 RRAGDQ9NQL2 400 aaPredicted RBP19.78■□□□□ 0.76
HOXC12-201ENST00000243103 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
HOXC12-201ENST00000243103 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
HOXC12-201ENST00000243103 BACH2Q9BYV9 841 aa19.76■□□□□ 0.75
HOXC12-201ENST00000243103 PNNQ9H307 717 aaKnown RBP19.76■□□□□ 0.75
HOXC12-201ENST00000243103 HSP90AA1P07900 732 aaKnown RBP19.75■□□□□ 0.75
HOXC12-201ENST00000243103 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
HOXC12-201ENST00000243103 PTPRKQ15262 1439 aa19.73■□□□□ 0.75
HOXC12-201ENST00000243103 WASHC2CQ9Y4E1 1318 aa19.73■□□□□ 0.75
HOXC12-201ENST00000243103 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
HOXC12-201ENST00000243103 CDCA7LQ96GN5 454 aa19.72■□□□□ 0.75
HOXC12-201ENST00000243103 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
HOXC12-201ENST00000243103 TCERG1O14776 1098 aaKnown RBP19.71■□□□□ 0.75
HOXC12-201ENST00000243103 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
HOXC12-201ENST00000243103 RCAN3Q9UKA8 241 aa19.68■□□□□ 0.74
HOXC12-201ENST00000243103 CRBNQ96SW2 442 aa19.66■□□□□ 0.74
HOXC12-201ENST00000243103 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
HOXC12-201ENST00000243103 RRP1P56182 461 aaKnown RBP19.65■□□□□ 0.74
HOXC12-201ENST00000243103 PANK2Q9BZ23 570 aa19.65■□□□□ 0.74
HOXC12-201ENST00000243103 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
HOXC12-201ENST00000243103 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
HOXC12-201ENST00000243103 CFTRP13569 1480 aa19.64■□□□□ 0.73
HOXC12-201ENST00000243103 FAM43AQ8N2R8 423 aa19.63■□□□□ 0.73
HOXC12-201ENST00000243103 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
HOXC12-201ENST00000243103 RBM10P98175 930 aaKnown RBP19.61■□□□□ 0.73
HOXC12-201ENST00000243103 CC2D1BQ5T0F9 858 aaKnown RBP19.6■□□□□ 0.73
HOXC12-201ENST00000243103 C20orf194Q5TEA3 1177 aa19.6■□□□□ 0.73
HOXC12-201ENST00000243103 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
HOXC12-201ENST00000243103 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
HOXC12-201ENST00000243103 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
HOXC12-201ENST00000243103 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.73
HOXC12-201ENST00000243103 PKD2Q13563 968 aa19.58■□□□□ 0.72
HOXC12-201ENST00000243103 CFDP1Q9UEE9 299 aaPredicted RBP19.57■□□□□ 0.72
HOXC12-201ENST00000243103 NCAPD3P42695 1498 aa19.57■□□□□ 0.72
HOXC12-201ENST00000243103 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
HOXC12-201ENST00000243103 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
HOXC12-201ENST00000243103 KIF7Q2M1P5 1343 aa19.56■□□□□ 0.72
HOXC12-201ENST00000243103 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
HOXC12-201ENST00000243103 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
HOXC12-201ENST00000243103 HNRNPMP52272 730 aaKnown RBP eCLIP19.49■□□□□ 0.71
HOXC12-201ENST00000243103 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
HOXC12-201ENST00000243103 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
HOXC12-201ENST00000243103 NCOA2Q15596 1464 aa19.48■□□□□ 0.71
HOXC12-201ENST00000243103 PRDM10Q9NQV6 1147 aa19.48■□□□□ 0.71
HOXC12-201ENST00000243103 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
HOXC12-201ENST00000243103 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
HOXC12-201ENST00000243103 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
HOXC12-201ENST00000243103 FAM13BQ9NYF5 915 aa19.46■□□□□ 0.71
HOXC12-201ENST00000243103 NAIPQ13075 1403 aa19.45■□□□□ 0.7
HOXC12-201ENST00000243103 GOLGA6L3A6NEY3 463 aa19.45■□□□□ 0.7
HOXC12-201ENST00000243103 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
HOXC12-201ENST00000243103 FOXD4L1Q9NU39 408 aa19.44■□□□□ 0.7
HOXC12-201ENST00000243103 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
HOXC12-201ENST00000243103 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
HOXC12-201ENST00000243103 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
HOXC12-201ENST00000243103 PNISRQ8TF01 805 aaKnown RBP19.41■□□□□ 0.7
HOXC12-201ENST00000243103 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
HOXC12-201ENST00000243103 TNNT2P45379 298 aaPredicted RBP19.41■□□□□ 0.7
HOXC12-201ENST00000243103 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
HOXC12-201ENST00000243103 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
HOXC12-201ENST00000243103 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.7
HOXC12-201ENST00000243103 TPRNQ4KMQ1 711 aa19.38■□□□□ 0.69
HOXC12-201ENST00000243103 FAM161AQ3B820 660 aa19.38■□□□□ 0.69
HOXC12-201ENST00000243103 SEC24BO95487 1268 aa19.37■□□□□ 0.69
HOXC12-201ENST00000243103 MS4A1P11836 297 aa19.36■□□□□ 0.69
HOXC12-201ENST00000243103 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
HOXC12-201ENST00000243103 RNF123Q5XPI4 1314 aa19.36■□□□□ 0.69
HOXC12-201ENST00000243103 MYOM3Q5VTT5 1437 aa19.35■□□□□ 0.69
HOXC12-201ENST00000243103 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
HOXC12-201ENST00000243103 L1TD1Q5T7N2 865 aaKnown RBP19.35■□□□□ 0.69
HOXC12-201ENST00000243103 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
HOXC12-201ENST00000243103 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
HOXC12-201ENST00000243103 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
HOXC12-201ENST00000243103 NCOA1Q15788 1441 aa19.33■□□□□ 0.68
HOXC12-201ENST00000243103 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
HOXC12-201ENST00000243103 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
HOXC12-201ENST00000243103 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
HOXC12-201ENST00000243103 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
HOXC12-201ENST00000243103 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
HOXC12-201ENST00000243103 NUP155O75694 1391 aa19.31■□□□□ 0.68
HOXC12-201ENST00000243103 RRP9O43818 475 aaKnown RBP19.31■□□□□ 0.68
HOXC12-201ENST00000243103 HFM1A2PYH4 1435 aa19.29■□□□□ 0.68
HOXC12-201ENST00000243103 NCLP19338 710 aaKnown RBP19.29■□□□□ 0.68
HOXC12-201ENST00000243103 BECN1Q14457 450 aa19.29■□□□□ 0.68
HOXC12-201ENST00000243103 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
HOXC12-201ENST00000243103 MPNDQ8N594 471 aa19.29■□□□□ 0.68
HOXC12-201ENST00000243103 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
HOXC12-201ENST00000243103 PRG4Q92954 1404 aaPredicted RBP19.28■□□□□ 0.68
HOXC12-201ENST00000243103 USP47Q96K76 1375 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms