RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 NUP155O75694 1391 aa22.13■■□□□ 1.13
DUSP4-201ENST00000240100 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
DUSP4-201ENST00000240100 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
DUSP4-201ENST00000240100 C14orf37Q86TY3 774 aa22.1■■□□□ 1.13
DUSP4-201ENST00000240100 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
DUSP4-201ENST00000240100 U2SURPO15042 1029 aaKnown RBP22.1■■□□□ 1.13
DUSP4-201ENST00000240100 DEKP35659 375 aaKnown RBP22.1■■□□□ 1.13
DUSP4-201ENST00000240100 HSP90AB1P08238 724 aaKnown RBP22.1■■□□□ 1.13
DUSP4-201ENST00000240100 L3MBTL2Q969R5 705 aa22.09■■□□□ 1.13
DUSP4-201ENST00000240100 PTMAP06454 111 aaKnown RBP22.07■■□□□ 1.12
DUSP4-201ENST00000240100 HSCBQ8IWL3 235 aa22.07■■□□□ 1.12
DUSP4-201ENST00000240100 ZBTB7CA1YPR0 619 aa22.06■■□□□ 1.12
DUSP4-201ENST00000240100 ARID4BQ4LE39 1312 aaPredicted RBP22.06■■□□□ 1.12
DUSP4-201ENST00000240100 CFAP44Q96MT7 982 aa22.05■■□□□ 1.12
DUSP4-201ENST00000240100 EIF3AQ14152 1382 aaKnown RBP22.05■■□□□ 1.12
DUSP4-201ENST00000240100 L1TD1Q5T7N2 865 aaKnown RBP22.05■■□□□ 1.12
DUSP4-201ENST00000240100 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
DUSP4-201ENST00000240100 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
DUSP4-201ENST00000240100 KIF15Q9NS87 1388 aa22■■□□□ 1.11
DUSP4-201ENST00000240100 RSPH4AQ5TD94 716 aa21.99■■□□□ 1.11
DUSP4-201ENST00000240100 NLRP13Q86W25 1043 aa21.98■■□□□ 1.11
DUSP4-201ENST00000240100 HAP1P54257 671 aaPredicted RBP21.97■■□□□ 1.11
DUSP4-201ENST00000240100 SRPK2P78362 688 aaKnown RBP21.97■■□□□ 1.11
DUSP4-201ENST00000240100 NAP1L5Q96NT1 182 aaPredicted RBP21.96■■□□□ 1.11
DUSP4-201ENST00000240100 IPO8O15397 1037 aaKnown RBP21.96■■□□□ 1.11
DUSP4-201ENST00000240100 IPO9Q96P70 1041 aaKnown RBP21.95■■□□□ 1.1
DUSP4-201ENST00000240100 ZRSR1Q15695 479 aaKnown RBP21.95■■□□□ 1.1
DUSP4-201ENST00000240100 KIF21BO75037 1637 aa21.95■■□□□ 1.1
DUSP4-201ENST00000240100 RTN4Q9NQC3 1192 aaKnown RBP21.95■■□□□ 1.1
DUSP4-201ENST00000240100 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
DUSP4-201ENST00000240100 RWDD1Q9H446 243 aaPredicted RBP21.94■■□□□ 1.1
DUSP4-201ENST00000240100 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
DUSP4-201ENST00000240100 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
DUSP4-201ENST00000240100 DNTTIP2Q5QJE6 756 aaKnown RBP21.92■■□□□ 1.1
DUSP4-201ENST00000240100 PTMSP20962 102 aa21.92■■□□□ 1.1
DUSP4-201ENST00000240100 PMFBP1Q8TBY8 1022 aa21.91■■□□□ 1.1
DUSP4-201ENST00000240100 HDGFL2Q7Z4V5 671 aaPredicted RBP21.9■■□□□ 1.1
DUSP4-201ENST00000240100 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
DUSP4-201ENST00000240100 CUX1P39880 1505 aa21.9■■□□□ 1.1
DUSP4-201ENST00000240100 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
DUSP4-201ENST00000240100 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
DUSP4-201ENST00000240100 ZBED9Q6R2W3 1325 aa21.89■■□□□ 1.09
DUSP4-201ENST00000240100 MCCP23508 829 aa21.89■■□□□ 1.09
DUSP4-201ENST00000240100 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
DUSP4-201ENST00000240100 OS9Q13438 667 aaPredicted RBP21.86■■□□□ 1.09
DUSP4-201ENST00000240100 HNRNPMP52272 730 aaKnown RBP eCLIP21.84■■□□□ 1.09
DUSP4-201ENST00000240100 U2AF1L5P0DN76 240 aaPredicted RBP21.83■■□□□ 1.09
DUSP4-201ENST00000240100 U2AF1Q01081 240 aaKnown RBP eCLIP21.83■■□□□ 1.09
DUSP4-201ENST00000240100 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
DUSP4-201ENST00000240100 PLEKHG5O94827 1062 aa21.83■■□□□ 1.08
DUSP4-201ENST00000240100 CCDC144AA2RUR9 1427 aa21.82■■□□□ 1.08
DUSP4-201ENST00000240100 GBP4Q96PP9 640 aa21.82■■□□□ 1.08
DUSP4-201ENST00000240100 IGF1RP08069 1367 aa21.81■■□□□ 1.08
DUSP4-201ENST00000240100 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
DUSP4-201ENST00000240100 FGD6Q6ZV73 1430 aa21.81■■□□□ 1.08
DUSP4-201ENST00000240100 GOLGA6L6A8MZA4 724 aa21.8■■□□□ 1.08
DUSP4-201ENST00000240100 ITPRIPQ8IWB1 547 aa21.8■■□□□ 1.08
DUSP4-201ENST00000240100 GGT6Q6P531 493 aa21.8■■□□□ 1.08
DUSP4-201ENST00000240100 LRRC9Q6ZRR7 1453 aa21.8■■□□□ 1.08
DUSP4-201ENST00000240100 USP47Q96K76 1375 aa21.8■■□□□ 1.08
DUSP4-201ENST00000240100 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
DUSP4-201ENST00000240100 UACAQ9BZF9 1416 aa21.78■■□□□ 1.08
DUSP4-201ENST00000240100 SPRYD3Q8NCJ5 442 aa21.78■■□□□ 1.08
DUSP4-201ENST00000240100 CENPJQ9HC77 1338 aaPredicted RBP21.78■■□□□ 1.08
DUSP4-201ENST00000240100 TPRNQ4KMQ1 711 aa21.78■■□□□ 1.08
DUSP4-201ENST00000240100 MYOM3Q5VTT5 1437 aa21.78■■□□□ 1.08
DUSP4-201ENST00000240100 KCNJ4P48050 445 aa21.77■■□□□ 1.08
DUSP4-201ENST00000240100 CDK11BP21127 795 aaKnown RBP21.77■■□□□ 1.08
DUSP4-201ENST00000240100 MSNP26038 577 aaKnown RBP21.77■■□□□ 1.08
DUSP4-201ENST00000240100 RTF1Q92541 710 aaKnown RBP21.77■■□□□ 1.07
DUSP4-201ENST00000240100 ST20-MTHFSA0A0A6YYL1 179 aa21.76■■□□□ 1.07
DUSP4-201ENST00000240100 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
DUSP4-201ENST00000240100 STK26Q9P289 416 aa21.75■■□□□ 1.07
DUSP4-201ENST00000240100 A0A0G2JS52 829 aa21.74■■□□□ 1.07
DUSP4-201ENST00000240100 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
DUSP4-201ENST00000240100 FANCIQ9NVI1 1328 aa21.74■■□□□ 1.07
DUSP4-201ENST00000240100 PLCB2Q00722 1185 aa21.74■■□□□ 1.07
DUSP4-201ENST00000240100 CENPQQ7L2Z9 268 aaPredicted RBP21.74■■□□□ 1.07
DUSP4-201ENST00000240100 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
DUSP4-201ENST00000240100 RRP1P56182 461 aaKnown RBP21.73■■□□□ 1.07
DUSP4-201ENST00000240100 USP35Q9P2H5 1018 aa21.73■■□□□ 1.07
DUSP4-201ENST00000240100 FGD1P98174 961 aa21.72■■□□□ 1.07
DUSP4-201ENST00000240100 TERF2IPQ9NYB0 399 aa21.72■■□□□ 1.07
DUSP4-201ENST00000240100 KIF3BO15066 747 aa21.72■■□□□ 1.07
DUSP4-201ENST00000240100 SMC4Q9NTJ3 1288 aa21.72■■□□□ 1.07
DUSP4-201ENST00000240100 CCDC146Q8IYE0 955 aa21.71■■□□□ 1.07
DUSP4-201ENST00000240100 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
DUSP4-201ENST00000240100 CASKIN1Q8WXD9 1431 aa21.7■■□□□ 1.07
DUSP4-201ENST00000240100 GOLGA6L4A6NEF3 574 aa21.7■■□□□ 1.06
DUSP4-201ENST00000240100 PANK3Q9H999 370 aa21.7■■□□□ 1.06
DUSP4-201ENST00000240100 SLKQ9H2G2 1235 aaPredicted RBP21.7■■□□□ 1.06
DUSP4-201ENST00000240100 CNTLNQ9NXG0 1405 aa21.7■■□□□ 1.06
DUSP4-201ENST00000240100 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
DUSP4-201ENST00000240100 NRDCO43847 1150 aa21.69■■□□□ 1.06
DUSP4-201ENST00000240100 FYCO1Q9BQS8 1478 aa21.68■■□□□ 1.06
DUSP4-201ENST00000240100 CHAF1AQ13111 956 aaPredicted RBP21.68■■□□□ 1.06
DUSP4-201ENST00000240100 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
DUSP4-201ENST00000240100 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
DUSP4-201ENST00000240100 MFAP1P55081 439 aaKnown RBP21.66■■□□□ 1.06
DUSP4-201ENST00000240100 PDE4AP27815 886 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms