RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
SYDE2-201ENST00000234668 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
SYDE2-201ENST00000234668 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
SYDE2-201ENST00000234668 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
SYDE2-201ENST00000234668 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
SYDE2-201ENST00000234668 KDM5BQ9UGL1 1544 aa12.74□□□□□ -0.37
SYDE2-201ENST00000234668 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
SYDE2-201ENST00000234668 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
SYDE2-201ENST00000234668 ABCC5O15440 1437 aa12.73□□□□□ -0.37
SYDE2-201ENST00000234668 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
SYDE2-201ENST00000234668 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
SYDE2-201ENST00000234668 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
SYDE2-201ENST00000234668 WDR62O43379 1518 aa12.72□□□□□ -0.37
SYDE2-201ENST00000234668 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
SYDE2-201ENST00000234668 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
SYDE2-201ENST00000234668 DAPK1P53355 1430 aa12.72□□□□□ -0.37
SYDE2-201ENST00000234668 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
SYDE2-201ENST00000234668 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
SYDE2-201ENST00000234668 KIAA0586Q9BVV6 1533 aa12.7□□□□□ -0.38
SYDE2-201ENST00000234668 PKD2Q13563 968 aa12.7□□□□□ -0.38
SYDE2-201ENST00000234668 KDM2AQ9Y2K7 1162 aa12.7□□□□□ -0.38
SYDE2-201ENST00000234668 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
SYDE2-201ENST00000234668 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
SYDE2-201ENST00000234668 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
SYDE2-201ENST00000234668 HNRNPMP52272 730 aaKnown RBP eCLIP12.67□□□□□ -0.38
SYDE2-201ENST00000234668 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
SYDE2-201ENST00000234668 PRKRIP1Q9H875 184 aaPredicted RBP12.66□□□□□ -0.38
SYDE2-201ENST00000234668 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
SYDE2-201ENST00000234668 KIAA0556O60303 1618 aa12.65□□□□□ -0.38
SYDE2-201ENST00000234668 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
SYDE2-201ENST00000234668 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
SYDE2-201ENST00000234668 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
SYDE2-201ENST00000234668 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
SYDE2-201ENST00000234668 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
SYDE2-201ENST00000234668 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
SYDE2-201ENST00000234668 GCC2Q8IWJ2 1684 aa12.61□□□□□ -0.39
SYDE2-201ENST00000234668 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
SYDE2-201ENST00000234668 RAPGEF6Q8TEU7 1601 aa12.6□□□□□ -0.39
SYDE2-201ENST00000234668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.39
SYDE2-201ENST00000234668 CAMSAP2Q08AD1 1489 aa12.6□□□□□ -0.39
SYDE2-201ENST00000234668 RPRD2Q5VT52 1461 aaKnown RBP12.6□□□□□ -0.39
SYDE2-201ENST00000234668 NUP155O75694 1391 aa12.6□□□□□ -0.39
SYDE2-201ENST00000234668 TSPY4P0CV99 314 aa12.59□□□□□ -0.39
SYDE2-201ENST00000234668 TSPY10P0CW01 314 aa12.59□□□□□ -0.39
SYDE2-201ENST00000234668 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
SYDE2-201ENST00000234668 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
SYDE2-201ENST00000234668 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
SYDE2-201ENST00000234668 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
SYDE2-201ENST00000234668 KIF14Q15058 1648 aa12.59□□□□□ -0.39
SYDE2-201ENST00000234668 PZPP20742 1482 aa12.58□□□□□ -0.4
SYDE2-201ENST00000234668 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
SYDE2-201ENST00000234668 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
SYDE2-201ENST00000234668 CARMIL2Q6F5E8 1435 aa12.57□□□□□ -0.4
SYDE2-201ENST00000234668 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
SYDE2-201ENST00000234668 DNMT1P26358 1616 aaKnown RBP12.56□□□□□ -0.4
SYDE2-201ENST00000234668 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
SYDE2-201ENST00000234668 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
SYDE2-201ENST00000234668 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
SYDE2-201ENST00000234668 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
SYDE2-201ENST00000234668 USP47Q96K76 1375 aa12.55□□□□□ -0.4
SYDE2-201ENST00000234668 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
SYDE2-201ENST00000234668 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
SYDE2-201ENST00000234668 ATP10BO94823 1461 aa12.54□□□□□ -0.4
SYDE2-201ENST00000234668 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
SYDE2-201ENST00000234668 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
SYDE2-201ENST00000234668 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.4
SYDE2-201ENST00000234668 PTPRGP23470 1445 aa12.5□□□□□ -0.41
SYDE2-201ENST00000234668 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
SYDE2-201ENST00000234668 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
SYDE2-201ENST00000234668 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
SYDE2-201ENST00000234668 NUP160Q12769 1436 aa12.48□□□□□ -0.41
SYDE2-201ENST00000234668 TMC1Q8TDI8 760 aa12.48□□□□□ -0.41
SYDE2-201ENST00000234668 DHX29Q7Z478 1369 aaKnown RBP12.46□□□□□ -0.41
SYDE2-201ENST00000234668 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.42
SYDE2-201ENST00000234668 ZBED9Q6R2W3 1325 aa12.45□□□□□ -0.42
SYDE2-201ENST00000234668 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
SYDE2-201ENST00000234668 BCORL1Q5H9F3 1711 aa12.43□□□□□ -0.42
SYDE2-201ENST00000234668 ABCC10Q5T3U5 1492 aa12.43□□□□□ -0.42
SYDE2-201ENST00000234668 PPP4R2Q9NY27 417 aa12.43□□□□□ -0.42
SYDE2-201ENST00000234668 MSH5O43196 834 aa12.43□□□□□ -0.42
SYDE2-201ENST00000234668 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
SYDE2-201ENST00000234668 ADGRL2O95490 1459 aa12.42□□□□□ -0.42
SYDE2-201ENST00000234668 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
SYDE2-201ENST00000234668 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
SYDE2-201ENST00000234668 ABCA8O94911 1581 aa12.4□□□□□ -0.42
SYDE2-201ENST00000234668 MYT1Q01538 1121 aa12.4□□□□□ -0.43
SYDE2-201ENST00000234668 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.43
SYDE2-201ENST00000234668 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
SYDE2-201ENST00000234668 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
SYDE2-201ENST00000234668 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
SYDE2-201ENST00000234668 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
SYDE2-201ENST00000234668 NUDCQ9Y266 331 aa12.36□□□□□ -0.43
SYDE2-201ENST00000234668 ADGBQ8N7X0 1667 aa12.36□□□□□ -0.43
SYDE2-201ENST00000234668 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
SYDE2-201ENST00000234668 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
SYDE2-201ENST00000234668 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
SYDE2-201ENST00000234668 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
SYDE2-201ENST00000234668 ARHGAP5Q13017 1502 aa12.34□□□□□ -0.43
SYDE2-201ENST00000234668 KDM5CP41229 1560 aa12.33□□□□□ -0.43
SYDE2-201ENST00000234668 SYCP2Q9BX26 1530 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms