RNA–Protein interactions for RNA: ENST00000228825.11

ARPC3-201, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC3, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-201ENST00000228825 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
ARPC3-201ENST00000228825 ATP10BO94823 1461 aa16.2■□□□□ 0.18
ARPC3-201ENST00000228825 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
ARPC3-201ENST00000228825 HECW1Q76N89 1606 aa16.19■□□□□ 0.18
ARPC3-201ENST00000228825 DIP2BQ9P265 1576 aa16.17■□□□□ 0.18
ARPC3-201ENST00000228825 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
ARPC3-201ENST00000228825 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
ARPC3-201ENST00000228825 CASKIN1Q8WXD9 1431 aa16.15■□□□□ 0.18
ARPC3-201ENST00000228825 GLI2P10070 1586 aa16.14■□□□□ 0.17
ARPC3-201ENST00000228825 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
ARPC3-201ENST00000228825 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
ARPC3-201ENST00000228825 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
ARPC3-201ENST00000228825 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
ARPC3-201ENST00000228825 ATP1B4Q9UN42 357 aaPredicted RBP16.13■□□□□ 0.17
ARPC3-201ENST00000228825 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
ARPC3-201ENST00000228825 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
ARPC3-201ENST00000228825 PLEKHD1A6NEE1 506 aa16.12■□□□□ 0.17
ARPC3-201ENST00000228825 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
ARPC3-201ENST00000228825 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
ARPC3-201ENST00000228825 EVX2Q03828 476 aa16.09■□□□□ 0.17
ARPC3-201ENST00000228825 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
ARPC3-201ENST00000228825 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
ARPC3-201ENST00000228825 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
ARPC3-201ENST00000228825 TSPOAP1O95153 1857 aa16.06■□□□□ 0.16
ARPC3-201ENST00000228825 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
ARPC3-201ENST00000228825 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
ARPC3-201ENST00000228825 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
ARPC3-201ENST00000228825 VPS8Q8N3P4 1428 aa16.03■□□□□ 0.16
ARPC3-201ENST00000228825 ABCA9Q8IUA7 1624 aa16.02■□□□□ 0.16
ARPC3-201ENST00000228825 CD109Q6YHK3 1445 aa16.01■□□□□ 0.15
ARPC3-201ENST00000228825 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
ARPC3-201ENST00000228825 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
ARPC3-201ENST00000228825 MAGI3Q5TCQ9 1506 aa15.99■□□□□ 0.15
ARPC3-201ENST00000228825 PPRC1Q5VV67 1664 aaKnown RBP15.99■□□□□ 0.15
ARPC3-201ENST00000228825 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
ARPC3-201ENST00000228825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.14
ARPC3-201ENST00000228825 KIF14Q15058 1648 aa15.95■□□□□ 0.14
ARPC3-201ENST00000228825 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
ARPC3-201ENST00000228825 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
ARPC3-201ENST00000228825 MTUS2Q5JR59 1369 aa15.92■□□□□ 0.14
ARPC3-201ENST00000228825 MKRN4PQ13434 485 aaPredicted RBP15.92■□□□□ 0.14
ARPC3-201ENST00000228825 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
ARPC3-201ENST00000228825 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
ARPC3-201ENST00000228825 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
ARPC3-201ENST00000228825 MYO5CQ9NQX4 1742 aa15.91■□□□□ 0.14
ARPC3-201ENST00000228825 TIAM1Q13009 1591 aa15.9■□□□□ 0.14
ARPC3-201ENST00000228825 NEO1Q92859 1461 aa15.9■□□□□ 0.14
ARPC3-201ENST00000228825 KDM6BO15054 1643 aa15.9■□□□□ 0.14
ARPC3-201ENST00000228825 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
ARPC3-201ENST00000228825 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
ARPC3-201ENST00000228825 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
ARPC3-201ENST00000228825 CFAP74Q9C0B2 1584 aa15.88■□□□□ 0.13
ARPC3-201ENST00000228825 PLCH2O75038 1416 aa15.88■□□□□ 0.13
ARPC3-201ENST00000228825 FANCAO15360 1455 aa15.85■□□□□ 0.13
ARPC3-201ENST00000228825 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
ARPC3-201ENST00000228825 EFCAB2Q5VUJ9 269 aa15.85■□□□□ 0.13
ARPC3-201ENST00000228825 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
ARPC3-201ENST00000228825 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
ARPC3-201ENST00000228825 SUPT6HQ7KZ85 1726 aaKnown RBP15.83■□□□□ 0.13
ARPC3-201ENST00000228825 PREX2Q70Z35 1606 aa15.83■□□□□ 0.12
ARPC3-201ENST00000228825 CDC42BPAQ5VT25 1732 aa15.82■□□□□ 0.12
ARPC3-201ENST00000228825 CDC42BPBQ9Y5S2 1711 aa15.82■□□□□ 0.12
ARPC3-201ENST00000228825 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
ARPC3-201ENST00000228825 ARHGAP5Q13017 1502 aa15.81■□□□□ 0.12
ARPC3-201ENST00000228825 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
ARPC3-201ENST00000228825 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
ARPC3-201ENST00000228825 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
ARPC3-201ENST00000228825 GPATCH8Q9UKJ3 1502 aaKnown RBP15.78■□□□□ 0.12
ARPC3-201ENST00000228825 NCOA2Q15596 1464 aa15.78■□□□□ 0.12
ARPC3-201ENST00000228825 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
ARPC3-201ENST00000228825 DENND4BO75064 1496 aaPredicted RBP15.77■□□□□ 0.11
ARPC3-201ENST00000228825 ADGRL1O94910 1474 aa15.77■□□□□ 0.11
ARPC3-201ENST00000228825 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
ARPC3-201ENST00000228825 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
ARPC3-201ENST00000228825 RICTORQ6R327 1708 aa15.74■□□□□ 0.11
ARPC3-201ENST00000228825 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
ARPC3-201ENST00000228825 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
ARPC3-201ENST00000228825 GABBR2O75899 941 aa15.71■□□□□ 0.11
ARPC3-201ENST00000228825 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
ARPC3-201ENST00000228825 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
ARPC3-201ENST00000228825 ZNF518AQ6AHZ1 1483 aa15.7■□□□□ 0.1
ARPC3-201ENST00000228825 FRMPD1Q5SYB0 1578 aa15.7■□□□□ 0.1
ARPC3-201ENST00000228825 KIAA1107Q9UPP5 1409 aa15.69■□□□□ 0.1
ARPC3-201ENST00000228825 ABCC1P33527 1531 aa15.69■□□□□ 0.1
ARPC3-201ENST00000228825 SAMD9LQ8IVG5 1584 aa15.69■□□□□ 0.1
ARPC3-201ENST00000228825 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
ARPC3-201ENST00000228825 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
ARPC3-201ENST00000228825 MYOM3Q5VTT5 1437 aa15.68■□□□□ 0.1
ARPC3-201ENST00000228825 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
ARPC3-201ENST00000228825 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
ARPC3-201ENST00000228825 RSPH4AQ5TD94 716 aa15.65■□□□□ 0.1
ARPC3-201ENST00000228825 KDM5CP41229 1560 aa15.65■□□□□ 0.1
ARPC3-201ENST00000228825 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
ARPC3-201ENST00000228825 ARHGEF12Q9NZN5 1544 aa15.64■□□□□ 0.09
ARPC3-201ENST00000228825 AFAP1Q8N556 730 aa15.64■□□□□ 0.09
ARPC3-201ENST00000228825 TRAPPC8Q9Y2L5 1435 aa15.63■□□□□ 0.09
ARPC3-201ENST00000228825 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.09
ARPC3-201ENST00000228825 CAMSAP2Q08AD1 1489 aa15.63■□□□□ 0.09
ARPC3-201ENST00000228825 ZFYVE16Q7Z3T8 1539 aa15.62■□□□□ 0.09
ARPC3-201ENST00000228825 ZNF644Q9H582 1327 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms