RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
NFKB1-201ENST00000226574 FANCIQ9NVI1 1328 aa17.84■□□□□ 0.45
NFKB1-201ENST00000226574 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.45
NFKB1-201ENST00000226574 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
NFKB1-201ENST00000226574 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.44
NFKB1-201ENST00000226574 TCERG1O14776 1098 aaKnown RBP17.83■□□□□ 0.44
NFKB1-201ENST00000226574 PDE4AP27815 886 aa17.82■□□□□ 0.44
NFKB1-201ENST00000226574 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
NFKB1-201ENST00000226574 CCDC18Q5T9S5 1454 aa17.82■□□□□ 0.44
NFKB1-201ENST00000226574 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
NFKB1-201ENST00000226574 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
NFKB1-201ENST00000226574 MSH5O43196 834 aa17.81■□□□□ 0.44
NFKB1-201ENST00000226574 NCLP19338 710 aaKnown RBP17.81■□□□□ 0.44
NFKB1-201ENST00000226574 KIF7Q2M1P5 1343 aa17.8■□□□□ 0.44
NFKB1-201ENST00000226574 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
NFKB1-201ENST00000226574 KTN1Q86UP2 1357 aaKnown RBP17.8■□□□□ 0.44
NFKB1-201ENST00000226574 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
NFKB1-201ENST00000226574 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
NFKB1-201ENST00000226574 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.44
NFKB1-201ENST00000226574 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
NFKB1-201ENST00000226574 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
NFKB1-201ENST00000226574 TRIM44Q96DX7 344 aaPredicted RBP17.76■□□□□ 0.43
NFKB1-201ENST00000226574 RALBP1Q15311 655 aa17.76■□□□□ 0.43
NFKB1-201ENST00000226574 CRBNQ96SW2 442 aa17.75■□□□□ 0.43
NFKB1-201ENST00000226574 PANK3Q9H999 370 aa17.74■□□□□ 0.43
NFKB1-201ENST00000226574 RRP1P56182 461 aaKnown RBP17.74■□□□□ 0.43
NFKB1-201ENST00000226574 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
NFKB1-201ENST00000226574 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
NFKB1-201ENST00000226574 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
NFKB1-201ENST00000226574 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
NFKB1-201ENST00000226574 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
NFKB1-201ENST00000226574 CCDC7Q96M83 1385 aa17.72■□□□□ 0.43
NFKB1-201ENST00000226574 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
NFKB1-201ENST00000226574 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
NFKB1-201ENST00000226574 NPM1P06748 294 aaKnown RBP eCLIP17.71■□□□□ 0.43
NFKB1-201ENST00000226574 USP47Q96K76 1375 aa17.71■□□□□ 0.43
NFKB1-201ENST00000226574 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
NFKB1-201ENST00000226574 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
NFKB1-201ENST00000226574 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
NFKB1-201ENST00000226574 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
NFKB1-201ENST00000226574 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
NFKB1-201ENST00000226574 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
NFKB1-201ENST00000226574 SKAP1Q86WV1 359 aa17.68■□□□□ 0.42
NFKB1-201ENST00000226574 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
NFKB1-201ENST00000226574 MYH16Q9H6N6 1097 aa17.68■□□□□ 0.42
NFKB1-201ENST00000226574 GLIPR1L2Q4G1C9 344 aa17.67■□□□□ 0.42
NFKB1-201ENST00000226574 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
NFKB1-201ENST00000226574 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
NFKB1-201ENST00000226574 APBB1O00213 710 aa17.65■□□□□ 0.42
NFKB1-201ENST00000226574 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
NFKB1-201ENST00000226574 STK26Q9P289 416 aa17.64■□□□□ 0.41
NFKB1-201ENST00000226574 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
NFKB1-201ENST00000226574 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
NFKB1-201ENST00000226574 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
NFKB1-201ENST00000226574 ZBTB7CA1YPR0 619 aa17.63■□□□□ 0.41
NFKB1-201ENST00000226574 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
NFKB1-201ENST00000226574 UACAQ9BZF9 1416 aa17.63■□□□□ 0.41
NFKB1-201ENST00000226574 SOX12O15370 315 aa17.63■□□□□ 0.41
NFKB1-201ENST00000226574 ANKRD30AQ9BXX3 1397 aa17.63■□□□□ 0.41
NFKB1-201ENST00000226574 APAF1O14727 1248 aa17.62■□□□□ 0.41
NFKB1-201ENST00000226574 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
NFKB1-201ENST00000226574 GGT6Q6P531 493 aa17.61■□□□□ 0.41
NFKB1-201ENST00000226574 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
NFKB1-201ENST00000226574 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
NFKB1-201ENST00000226574 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
NFKB1-201ENST00000226574 MFAP1P55081 439 aaKnown RBP17.61■□□□□ 0.41
NFKB1-201ENST00000226574 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
NFKB1-201ENST00000226574 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
NFKB1-201ENST00000226574 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
NFKB1-201ENST00000226574 PDE3BQ13370 1112 aa17.59■□□□□ 0.41
NFKB1-201ENST00000226574 GOLGA6L22H0YM25 854 aa17.58■□□□□ 0.41
NFKB1-201ENST00000226574 POGKQ9P215 609 aa17.58■□□□□ 0.41
NFKB1-201ENST00000226574 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
NFKB1-201ENST00000226574 GSE1Q14687 1217 aa17.56■□□□□ 0.4
NFKB1-201ENST00000226574 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
NFKB1-201ENST00000226574 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
NFKB1-201ENST00000226574 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
NFKB1-201ENST00000226574 ARID3AQ99856 593 aa17.56■□□□□ 0.4
NFKB1-201ENST00000226574 HSCBQ8IWL3 235 aa17.55■□□□□ 0.4
NFKB1-201ENST00000226574 JPH4Q96JJ6 628 aa17.55■□□□□ 0.4
NFKB1-201ENST00000226574 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
NFKB1-201ENST00000226574 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
NFKB1-201ENST00000226574 CFTRP13569 1480 aa17.54■□□□□ 0.4
NFKB1-201ENST00000226574 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
NFKB1-201ENST00000226574 C14orf37Q86TY3 774 aa17.53■□□□□ 0.4
NFKB1-201ENST00000226574 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
NFKB1-201ENST00000226574 FAM161AQ3B820 660 aa17.53■□□□□ 0.4
NFKB1-201ENST00000226574 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
NFKB1-201ENST00000226574 BRPF3Q9ULD4 1205 aa17.52■□□□□ 0.4
NFKB1-201ENST00000226574 KIF3BO15066 747 aa17.52■□□□□ 0.39
NFKB1-201ENST00000226574 PTMAP06454 111 aaKnown RBP17.52■□□□□ 0.39
NFKB1-201ENST00000226574 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.39
NFKB1-201ENST00000226574 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
NFKB1-201ENST00000226574 CENPJQ9HC77 1338 aaPredicted RBP17.51■□□□□ 0.39
NFKB1-201ENST00000226574 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
NFKB1-201ENST00000226574 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
NFKB1-201ENST00000226574 DNTTIP2Q5QJE6 756 aaKnown RBP17.5■□□□□ 0.39
NFKB1-201ENST00000226574 SMC4Q9NTJ3 1288 aa17.5■□□□□ 0.39
NFKB1-201ENST00000226574 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
NFKB1-201ENST00000226574 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms