RNA–Protein interactions for RNA: ENST00000223609.10

PRUNE2-201, Transcript of prune homolog 2, humanhuman

TSL 2 BASIC

Gene PRUNE2, Length 2,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-201ENST00000223609 ATXN8OSP0DMR3 200 aa8.48□□□□□ -1.05
PRUNE2-201ENST00000223609 KCNH8Q96L42 1107 aa8.48□□□□□ -1.05
PRUNE2-201ENST00000223609 CASKIN1Q8WXD9 1431 aa8.46□□□□□ -1.05
PRUNE2-201ENST00000223609 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.06
PRUNE2-201ENST00000223609 COL17A1Q9UMD9 1497 aaPredicted RBP8.45□□□□□ -1.06
PRUNE2-201ENST00000223609 FYCO1Q9BQS8 1478 aa8.45□□□□□ -1.06
PRUNE2-201ENST00000223609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.45□□□□□ -1.06
PRUNE2-201ENST00000223609 CACNB1Q02641 598 aaPredicted RBP8.45□□□□□ -1.06
PRUNE2-201ENST00000223609 CEP162Q5TB80 1403 aa8.44□□□□□ -1.06
PRUNE2-201ENST00000223609 CCDC18Q5T9S5 1454 aa8.44□□□□□ -1.06
PRUNE2-201ENST00000223609 PLEKHD1A6NEE1 506 aa8.44□□□□□ -1.06
PRUNE2-201ENST00000223609 KIF14Q15058 1648 aa8.43□□□□□ -1.06
PRUNE2-201ENST00000223609 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
PRUNE2-201ENST00000223609 NEO1Q92859 1461 aa8.42□□□□□ -1.06
PRUNE2-201ENST00000223609 ARAP3Q8WWN8 1544 aa8.42□□□□□ -1.06
PRUNE2-201ENST00000223609 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
PRUNE2-201ENST00000223609 TROQ12816 1431 aaPredicted RBP8.41□□□□□ -1.06
PRUNE2-201ENST00000223609 MYO5CQ9NQX4 1742 aa8.41□□□□□ -1.06
PRUNE2-201ENST00000223609 PHLDB1Q86UU1 1377 aa8.4□□□□□ -1.07
PRUNE2-201ENST00000223609 FRMPD1Q5SYB0 1578 aa8.4□□□□□ -1.07
PRUNE2-201ENST00000223609 ZBTB22O15209 634 aa8.39□□□□□ -1.07
PRUNE2-201ENST00000223609 CDK11AQ9UQ88 783 aaPredicted RBP8.39□□□□□ -1.07
PRUNE2-201ENST00000223609 FANCAO15360 1455 aa8.39□□□□□ -1.07
PRUNE2-201ENST00000223609 ZNF219Q9P2Y4 722 aaPredicted RBP8.38□□□□□ -1.07
PRUNE2-201ENST00000223609 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
PRUNE2-201ENST00000223609 RICTORQ6R327 1708 aa8.38□□□□□ -1.07
PRUNE2-201ENST00000223609 PLCH2O75038 1416 aa8.38□□□□□ -1.07
PRUNE2-201ENST00000223609 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
PRUNE2-201ENST00000223609 AKNAQ7Z591 1439 aa8.37□□□□□ -1.07
PRUNE2-201ENST00000223609 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
PRUNE2-201ENST00000223609 CDC42BPAQ5VT25 1732 aa8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 ARHGAP5Q13017 1502 aa8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 ZMYM4Q5VZL5 1548 aa8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 EHBP1L1Q8N3D4 1523 aa8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 DENND4BO75064 1496 aaPredicted RBP8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 ADGRL1O94910 1474 aa8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 VPS8Q8N3P4 1428 aa8.35□□□□□ -1.07
PRUNE2-201ENST00000223609 ARHGEF40Q8TER5 1519 aa8.34□□□□□ -1.07
PRUNE2-201ENST00000223609 RAPGEF3O95398 923 aa8.34□□□□□ -1.07
PRUNE2-201ENST00000223609 POGZQ7Z3K3 1410 aa8.33□□□□□ -1.08
PRUNE2-201ENST00000223609 TIAM1Q13009 1591 aa8.33□□□□□ -1.08
PRUNE2-201ENST00000223609 ABCC1P33527 1531 aa8.32□□□□□ -1.08
PRUNE2-201ENST00000223609 SCAPERQ9BY12 1400 aa8.32□□□□□ -1.08
PRUNE2-201ENST00000223609 ITSN2Q9NZM3 1697 aa8.32□□□□□ -1.08
PRUNE2-201ENST00000223609 MTUS2Q5JR59 1369 aa8.31□□□□□ -1.08
PRUNE2-201ENST00000223609 ZFYVE16Q7Z3T8 1539 aa8.31□□□□□ -1.08
PRUNE2-201ENST00000223609 KDM4FA0A1W2PPD8 638 aa8.31□□□□□ -1.08
PRUNE2-201ENST00000223609 EFCAB2Q5VUJ9 269 aa8.31□□□□□ -1.08
PRUNE2-201ENST00000223609 KDM5CP41229 1560 aa8.31□□□□□ -1.08
PRUNE2-201ENST00000223609 GPATCH8Q9UKJ3 1502 aaKnown RBP8.3□□□□□ -1.08
PRUNE2-201ENST00000223609 SAMD9LQ8IVG5 1584 aa8.3□□□□□ -1.08
PRUNE2-201ENST00000223609 ZNF518AQ6AHZ1 1483 aa8.3□□□□□ -1.08
PRUNE2-201ENST00000223609 MAGI2Q86UL8 1455 aa8.3□□□□□ -1.08
PRUNE2-201ENST00000223609 SUPT6HQ7KZ85 1726 aaKnown RBP8.3□□□□□ -1.08
PRUNE2-201ENST00000223609 ARHGEF12Q9NZN5 1544 aa8.29□□□□□ -1.08
PRUNE2-201ENST00000223609 CAPN15O75808 1086 aa8.29□□□□□ -1.08
PRUNE2-201ENST00000223609 HECW2Q9P2P5 1572 aa8.29□□□□□ -1.08
PRUNE2-201ENST00000223609 YEATS2Q9ULM3 1422 aa8.29□□□□□ -1.08
PRUNE2-201ENST00000223609 SIGLEC1Q9BZZ2 1709 aa8.29□□□□□ -1.08
PRUNE2-201ENST00000223609 MAP3K1Q13233 1512 aa8.28□□□□□ -1.08
PRUNE2-201ENST00000223609 CCNB3Q8WWL7 1395 aa8.28□□□□□ -1.08
PRUNE2-201ENST00000223609 SYCP2Q9BX26 1530 aa8.28□□□□□ -1.08
PRUNE2-201ENST00000223609 BCORL1Q5H9F3 1711 aa8.28□□□□□ -1.08
PRUNE2-201ENST00000223609 NCOA2Q15596 1464 aa8.27□□□□□ -1.09
PRUNE2-201ENST00000223609 LRRC9Q6ZRR7 1453 aa8.27□□□□□ -1.09
PRUNE2-201ENST00000223609 ADAMTSL3P82987 1691 aa8.27□□□□□ -1.09
PRUNE2-201ENST00000223609 ABCA6Q8N139 1617 aa8.26□□□□□ -1.09
PRUNE2-201ENST00000223609 DIP2CQ9Y2E4 1556 aa8.26□□□□□ -1.09
PRUNE2-201ENST00000223609 TRAPPC8Q9Y2L5 1435 aa8.26□□□□□ -1.09
PRUNE2-201ENST00000223609 PLEKHH2Q8IVE3 1493 aa8.25□□□□□ -1.09
PRUNE2-201ENST00000223609 MLH3Q9UHC1 1453 aa8.25□□□□□ -1.09
PRUNE2-201ENST00000223609 C9orf84Q5VXU9 1444 aa8.25□□□□□ -1.09
PRUNE2-201ENST00000223609 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
PRUNE2-201ENST00000223609 MADDQ8WXG6 1647 aa8.25□□□□□ -1.09
PRUNE2-201ENST00000223609 KIAA1107Q9UPP5 1409 aa8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 REREQ9P2R6 1566 aa8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 AFAP1Q8N556 730 aa8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 ATP10AO60312 1499 aa8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 INO80Q9ULG1 1556 aaPredicted RBP8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 CFDP1Q9UEE9 299 aaPredicted RBP8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 ZNF777Q9ULD5 760 aaPredicted RBP8.24□□□□□ -1.09
PRUNE2-201ENST00000223609 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 KANK4Q5T7N3 995 aaPredicted RBP8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 ATP7AQ04656 1500 aa8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 ARID4BQ4LE39 1312 aaPredicted RBP8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 RIMS1Q86UR5 1692 aaKnown RBP8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 MBD5Q9P267 1494 aa8.22□□□□□ -1.09
PRUNE2-201ENST00000223609 FER1L4A9Z1Z3 1794 aa8.21□□□□□ -1.09
PRUNE2-201ENST00000223609 ZNF644Q9H582 1327 aaPredicted RBP8.21□□□□□ -1.1
PRUNE2-201ENST00000223609 PTPRMP28827 1452 aa8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 HNRNPMP52272 730 aaKnown RBP eCLIP8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 ZBTB12Q9Y330 459 aaPredicted RBP8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 AGLP35573 1532 aa8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 MYOM3Q5VTT5 1437 aa8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 PLXNC1O60486 1568 aa8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 ARHGEF5Q12774 1597 aa8.2□□□□□ -1.1
PRUNE2-201ENST00000223609 CCDC141Q6ZP82 1450 aa8.19□□□□□ -1.1
PRUNE2-201ENST00000223609 ADGBQ8N7X0 1667 aa8.19□□□□□ -1.1
PRUNE2-201ENST00000223609 SPAG9O60271 1321 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms