RNA–Protein interactions for RNA: ENST00000223609.10

PRUNE2-201, Transcript of prune homolog 2, humanhuman

TSL 2 BASIC

Gene PRUNE2, Length 2,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-201ENST00000223609 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
PRUNE2-201ENST00000223609 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
PRUNE2-201ENST00000223609 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
PRUNE2-201ENST00000223609 SENP3Q9H4L4 574 aaPredicted RBP11.87□□□□□ -0.51
PRUNE2-201ENST00000223609 PHF23Q9BUL5 403 aaPredicted RBP11.71□□□□□ -0.53
PRUNE2-201ENST00000223609 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
PRUNE2-201ENST00000223609 ABCC9O60706 1549 aa11.19□□□□□ -0.62
PRUNE2-201ENST00000223609 PLPPR3Q6T4P5 718 aa10.99□□□□□ -0.65
PRUNE2-201ENST00000223609 FOXD1Q16676 465 aa10.85□□□□□ -0.67
PRUNE2-201ENST00000223609 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.68
PRUNE2-201ENST00000223609 NACADO15069 1562 aa10.75□□□□□ -0.69
PRUNE2-201ENST00000223609 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
PRUNE2-201ENST00000223609 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
PRUNE2-201ENST00000223609 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
PRUNE2-201ENST00000223609 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
PRUNE2-201ENST00000223609 UNC13AQ9UPW8 1703 aa10.56□□□□□ -0.72
PRUNE2-201ENST00000223609 BICRAQ9NZM4 1560 aa10.46□□□□□ -0.73
PRUNE2-201ENST00000223609 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
PRUNE2-201ENST00000223609 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
PRUNE2-201ENST00000223609 SHROOM4Q9ULL8 1493 aa10.35□□□□□ -0.75
PRUNE2-201ENST00000223609 ADRA2BP18089 450 aa10.3□□□□□ -0.76
PRUNE2-201ENST00000223609 PPP6R1Q9UPN7 881 aa10.28□□□□□ -0.76
PRUNE2-201ENST00000223609 DNAJC5BQ9UF47 199 aa10.28□□□□□ -0.76
PRUNE2-201ENST00000223609 PIAS4Q8N2W9 510 aaPredicted RBP10.25□□□□□ -0.77
PRUNE2-201ENST00000223609 MSH5O43196 834 aa10.24□□□□□ -0.77
PRUNE2-201ENST00000223609 EIF4G1Q04637 1599 aaKnown RBP10.18□□□□□ -0.78
PRUNE2-201ENST00000223609 CC2D2AQ9P2K1 1620 aa10.15□□□□□ -0.79
PRUNE2-201ENST00000223609 CECR2Q9BXF3 1484 aa10.07□□□□□ -0.8
PRUNE2-201ENST00000223609 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
PRUNE2-201ENST00000223609 BAZ1AQ9NRL2 1556 aaPredicted RBP9.94□□□□□ -0.82
PRUNE2-201ENST00000223609 ATAD2BQ9ULI0 1458 aa9.9□□□□□ -0.82
PRUNE2-201ENST00000223609 SMARCA2P51531 1590 aa9.9□□□□□ -0.82
PRUNE2-201ENST00000223609 NCAPD3P42695 1498 aa9.9□□□□□ -0.82
PRUNE2-201ENST00000223609 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
PRUNE2-201ENST00000223609 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
PRUNE2-201ENST00000223609 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
PRUNE2-201ENST00000223609 BAZ1BQ9UIG0 1483 aaKnown RBP9.83□□□□□ -0.84
PRUNE2-201ENST00000223609 WIZO95785 1651 aa9.78□□□□□ -0.84
PRUNE2-201ENST00000223609 SCAF1Q9H7N4 1312 aaKnown RBP9.74□□□□□ -0.85
PRUNE2-201ENST00000223609 RSF1Q96T23 1441 aaPredicted RBP9.74□□□□□ -0.85
PRUNE2-201ENST00000223609 NESP48681 1621 aa9.68□□□□□ -0.86
PRUNE2-201ENST00000223609 TOP2AP11388 1531 aaKnown RBP9.68□□□□□ -0.86
PRUNE2-201ENST00000223609 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
PRUNE2-201ENST00000223609 ERCC6Q03468 1493 aa9.65□□□□□ -0.86
PRUNE2-201ENST00000223609 KIF21AQ7Z4S6 1674 aa9.6□□□□□ -0.87
PRUNE2-201ENST00000223609 CADPSQ9ULU8 1353 aa9.6□□□□□ -0.87
PRUNE2-201ENST00000223609 PPP4R3CPQ6ZMV5 832 aa9.59□□□□□ -0.87
PRUNE2-201ENST00000223609 THOC2Q8NI27 1593 aaKnown RBP9.58□□□□□ -0.88
PRUNE2-201ENST00000223609 CUX2O14529 1486 aa9.58□□□□□ -0.88
PRUNE2-201ENST00000223609 PDS5BQ9NTI5 1447 aa9.57□□□□□ -0.88
PRUNE2-201ENST00000223609 CFTRP13569 1480 aa9.55□□□□□ -0.88
PRUNE2-201ENST00000223609 CCDC88BA6NC98 1476 aa9.53□□□□□ -0.88
PRUNE2-201ENST00000223609 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
PRUNE2-201ENST00000223609 FANCD2Q9BXW9 1451 aa9.51□□□□□ -0.89
PRUNE2-201ENST00000223609 MRC2Q9UBG0 1479 aa9.5□□□□□ -0.89
PRUNE2-201ENST00000223609 CEP164Q9UPV0 1460 aa9.5□□□□□ -0.89
PRUNE2-201ENST00000223609 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
PRUNE2-201ENST00000223609 WDR62O43379 1518 aa9.49□□□□□ -0.89
PRUNE2-201ENST00000223609 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
PRUNE2-201ENST00000223609 DMRT2Q9Y5R5 561 aa9.43□□□□□ -0.9
PRUNE2-201ENST00000223609 URB2Q14146 1524 aaKnown RBP9.42□□□□□ -0.9
PRUNE2-201ENST00000223609 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.9
PRUNE2-201ENST00000223609 DNMBPQ6XZF7 1577 aa9.35□□□□□ -0.91
PRUNE2-201ENST00000223609 TOPBP1Q92547 1522 aa9.35□□□□□ -0.91
PRUNE2-201ENST00000223609 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
PRUNE2-201ENST00000223609 MAPK8IP2Q13387 824 aaPredicted RBP9.3□□□□□ -0.92
PRUNE2-201ENST00000223609 IFT140Q96RY7 1462 aa9.3□□□□□ -0.92
PRUNE2-201ENST00000223609 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
PRUNE2-201ENST00000223609 TARBP1Q13395 1621 aaKnown RBP9.27□□□□□ -0.92
PRUNE2-201ENST00000223609 POLA1P09884 1462 aaPredicted RBP9.27□□□□□ -0.92
PRUNE2-201ENST00000223609 CUX1P39880 1505 aa9.27□□□□□ -0.92
PRUNE2-201ENST00000223609 RNF216Q9NWF9 866 aaPredicted RBP9.27□□□□□ -0.93
PRUNE2-201ENST00000223609 ZNF608Q9ULD9 1512 aaPredicted RBP9.26□□□□□ -0.93
PRUNE2-201ENST00000223609 EIF4G3O43432 1585 aaKnown RBP9.26□□□□□ -0.93
PRUNE2-201ENST00000223609 FGD5Q6ZNL6 1462 aa9.25□□□□□ -0.93
PRUNE2-201ENST00000223609 POTEDQ86YR6 584 aa9.24□□□□□ -0.93
PRUNE2-201ENST00000223609 HOXD11P31277 338 aaPredicted RBP9.23□□□□□ -0.93
PRUNE2-201ENST00000223609 RAD54L2Q9Y4B4 1467 aa9.22□□□□□ -0.93
PRUNE2-201ENST00000223609 WDR97A6NE52 1622 aa9.21□□□□□ -0.93
PRUNE2-201ENST00000223609 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
PRUNE2-201ENST00000223609 SOGA1O94964 1423 aa9.2□□□□□ -0.94
PRUNE2-201ENST00000223609 TOP2BQ02880 1626 aa9.19□□□□□ -0.94
PRUNE2-201ENST00000223609 SYNJ1O43426 1573 aa9.19□□□□□ -0.94
PRUNE2-201ENST00000223609 KCNA4P22459 653 aa9.19□□□□□ -0.94
PRUNE2-201ENST00000223609 AQRO60306 1485 aaKnown RBP eCLIP9.19□□□□□ -0.94
PRUNE2-201ENST00000223609 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
PRUNE2-201ENST00000223609 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
PRUNE2-201ENST00000223609 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.94
PRUNE2-201ENST00000223609 NPM3O75607 178 aaKnown RBP9.15□□□□□ -0.94
PRUNE2-201ENST00000223609 CHD1O14646 1710 aa9.15□□□□□ -0.94
PRUNE2-201ENST00000223609 ABCA5Q8WWZ7 1642 aa9.15□□□□□ -0.95
PRUNE2-201ENST00000223609 PBRM1Q86U86 1689 aa9.14□□□□□ -0.95
PRUNE2-201ENST00000223609 SNAPC4Q5SXM2 1469 aa9.13□□□□□ -0.95
PRUNE2-201ENST00000223609 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
PRUNE2-201ENST00000223609 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
PRUNE2-201ENST00000223609 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
PRUNE2-201ENST00000223609 MAGI1Q96QZ7 1491 aaPredicted RBP9.11□□□□□ -0.95
PRUNE2-201ENST00000223609 SYNJ2O15056 1496 aa9.07□□□□□ -0.96
PRUNE2-201ENST00000223609 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
PRUNE2-201ENST00000223609 FBLN2P98095 1184 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms