RNA–Protein interactions for RNA: ENST00000219439.8

HSDL1-201, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSDL1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-201ENST00000219439 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
HSDL1-201ENST00000219439 GCC2Q8IWJ2 1684 aa20.77■□□□□ 0.92
HSDL1-201ENST00000219439 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
HSDL1-201ENST00000219439 JPH4Q96JJ6 628 aa20.75■□□□□ 0.91
HSDL1-201ENST00000219439 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
HSDL1-201ENST00000219439 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
HSDL1-201ENST00000219439 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
HSDL1-201ENST00000219439 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
HSDL1-201ENST00000219439 ANP32EQ9BTT0 268 aa20.7■□□□□ 0.9
HSDL1-201ENST00000219439 SLC4A1APQ9BWU0 796 aaKnown RBP20.69■□□□□ 0.9
HSDL1-201ENST00000219439 RBM19Q9Y4C8 960 aaKnown RBP20.69■□□□□ 0.9
HSDL1-201ENST00000219439 C11orf95C9JLR9 678 aaPredicted RBP20.68■□□□□ 0.9
HSDL1-201ENST00000219439 CCDC184Q52MB2 194 aa20.67■□□□□ 0.9
HSDL1-201ENST00000219439 DAPK1P53355 1430 aa20.67■□□□□ 0.9
HSDL1-201ENST00000219439 CNTLNQ9NXG0 1405 aa20.66■□□□□ 0.9
HSDL1-201ENST00000219439 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
HSDL1-201ENST00000219439 NBPF8Q3BBV2 869 aa20.65■□□□□ 0.9
HSDL1-201ENST00000219439 NUP160Q12769 1436 aa20.64■□□□□ 0.9
HSDL1-201ENST00000219439 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.89
HSDL1-201ENST00000219439 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
HSDL1-201ENST00000219439 DISP1Q96F81 1524 aa20.63■□□□□ 0.89
HSDL1-201ENST00000219439 ANKRD30BQ9BXX2 1392 aa20.63■□□□□ 0.89
HSDL1-201ENST00000219439 ABCC5O15440 1437 aa20.62■□□□□ 0.89
HSDL1-201ENST00000219439 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
HSDL1-201ENST00000219439 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
HSDL1-201ENST00000219439 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
HSDL1-201ENST00000219439 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
HSDL1-201ENST00000219439 CARMIL2Q6F5E8 1435 aa20.61■□□□□ 0.89
HSDL1-201ENST00000219439 ROCK1Q13464 1354 aa20.6■□□□□ 0.89
HSDL1-201ENST00000219439 NCOA1Q15788 1441 aa20.59■□□□□ 0.89
HSDL1-201ENST00000219439 RPRD2Q5VT52 1461 aaKnown RBP20.59■□□□□ 0.89
HSDL1-201ENST00000219439 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
HSDL1-201ENST00000219439 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.89
HSDL1-201ENST00000219439 KIAA0556O60303 1618 aa20.58■□□□□ 0.89
HSDL1-201ENST00000219439 NUP153P49790 1475 aaKnown RBP20.58■□□□□ 0.88
HSDL1-201ENST00000219439 CFDP1Q9UEE9 299 aaPredicted RBP20.57■□□□□ 0.88
HSDL1-201ENST00000219439 CHD1O14646 1710 aa20.57■□□□□ 0.88
HSDL1-201ENST00000219439 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
HSDL1-201ENST00000219439 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
HSDL1-201ENST00000219439 TEX14Q8IWB6 1497 aa20.54■□□□□ 0.88
HSDL1-201ENST00000219439 PRG4Q92954 1404 aaPredicted RBP20.54■□□□□ 0.88
HSDL1-201ENST00000219439 RAPGEF6Q8TEU7 1601 aa20.52■□□□□ 0.87
HSDL1-201ENST00000219439 PLB1Q6P1J6 1458 aa20.49■□□□□ 0.87
HSDL1-201ENST00000219439 CAMSAP2Q08AD1 1489 aa20.48■□□□□ 0.87
HSDL1-201ENST00000219439 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
HSDL1-201ENST00000219439 PKD2Q13563 968 aa20.46■□□□□ 0.87
HSDL1-201ENST00000219439 SPATA31E1Q6ZUB1 1445 aa20.45■□□□□ 0.86
HSDL1-201ENST00000219439 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
HSDL1-201ENST00000219439 PZPP20742 1482 aa20.45■□□□□ 0.86
HSDL1-201ENST00000219439 PPP4R2Q9NY27 417 aa20.45■□□□□ 0.86
HSDL1-201ENST00000219439 PTPRGP23470 1445 aa20.44■□□□□ 0.86
HSDL1-201ENST00000219439 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
HSDL1-201ENST00000219439 USP47Q96K76 1375 aa20.41■□□□□ 0.86
HSDL1-201ENST00000219439 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
HSDL1-201ENST00000219439 ERICH6BQ5W0A0 696 aa20.4■□□□□ 0.86
HSDL1-201ENST00000219439 KIAA1107Q9UPP5 1409 aa20.4■□□□□ 0.86
HSDL1-201ENST00000219439 ANKRD30AQ9BXX3 1397 aa20.4■□□□□ 0.86
HSDL1-201ENST00000219439 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
HSDL1-201ENST00000219439 KIF14Q15058 1648 aa20.38■□□□□ 0.85
HSDL1-201ENST00000219439 MSH5O43196 834 aa20.36■□□□□ 0.85
HSDL1-201ENST00000219439 ITSN2Q9NZM3 1697 aa20.36■□□□□ 0.85
HSDL1-201ENST00000219439 PLEKHD1A6NEE1 506 aa20.36■□□□□ 0.85
HSDL1-201ENST00000219439 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
HSDL1-201ENST00000219439 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
HSDL1-201ENST00000219439 NUP155O75694 1391 aa20.35■□□□□ 0.85
HSDL1-201ENST00000219439 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
HSDL1-201ENST00000219439 ADGBQ8N7X0 1667 aa20.33■□□□□ 0.85
HSDL1-201ENST00000219439 ERICH6Q7L0X2 663 aa20.33■□□□□ 0.85
HSDL1-201ENST00000219439 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
HSDL1-201ENST00000219439 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
HSDL1-201ENST00000219439 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
HSDL1-201ENST00000219439 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
HSDL1-201ENST00000219439 MBD5Q9P267 1494 aa20.31■□□□□ 0.84
HSDL1-201ENST00000219439 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
HSDL1-201ENST00000219439 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
HSDL1-201ENST00000219439 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
HSDL1-201ENST00000219439 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
HSDL1-201ENST00000219439 BCORL1Q5H9F3 1711 aa20.28■□□□□ 0.84
HSDL1-201ENST00000219439 TMC1Q8TDI8 760 aa20.28■□□□□ 0.84
HSDL1-201ENST00000219439 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
HSDL1-201ENST00000219439 HNRNPMP52272 730 aaKnown RBP eCLIP20.26■□□□□ 0.83
HSDL1-201ENST00000219439 ATP10BO94823 1461 aa20.26■□□□□ 0.83
HSDL1-201ENST00000219439 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
HSDL1-201ENST00000219439 DCAF11Q8TEB1 546 aa20.25■□□□□ 0.83
HSDL1-201ENST00000219439 ABCA8O94911 1581 aa20.25■□□□□ 0.83
HSDL1-201ENST00000219439 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
HSDL1-201ENST00000219439 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
HSDL1-201ENST00000219439 CLASP1Q7Z460 1538 aa20.24■□□□□ 0.83
HSDL1-201ENST00000219439 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
HSDL1-201ENST00000219439 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
HSDL1-201ENST00000219439 KDM5CP41229 1560 aa20.23■□□□□ 0.83
HSDL1-201ENST00000219439 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
HSDL1-201ENST00000219439 ARID4BQ4LE39 1312 aaPredicted RBP20.22■□□□□ 0.83
HSDL1-201ENST00000219439 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
HSDL1-201ENST00000219439 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
HSDL1-201ENST00000219439 RALGAPBQ86X10 1494 aa20.19■□□□□ 0.82
HSDL1-201ENST00000219439 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
HSDL1-201ENST00000219439 CDC42BPAQ5VT25 1732 aa20.18■□□□□ 0.82
HSDL1-201ENST00000219439 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
HSDL1-201ENST00000219439 UHRF1BP1Q6BDS2 1440 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms