RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
POLR2E-201ENST00000215587 CFDP1Q9UEE9 299 aaPredicted RBP25.22■■□□□ 1.63
POLR2E-201ENST00000215587 CDC42BPAQ5VT25 1732 aa25.22■■□□□ 1.63
POLR2E-201ENST00000215587 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
POLR2E-201ENST00000215587 PREX2Q70Z35 1606 aa25.21■■□□□ 1.63
POLR2E-201ENST00000215587 MYO5CQ9NQX4 1742 aa25.2■■□□□ 1.63
POLR2E-201ENST00000215587 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.62
POLR2E-201ENST00000215587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.19■■□□□ 1.621e-6■■□□□ 13.7
POLR2E-201ENST00000215587 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
POLR2E-201ENST00000215587 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
POLR2E-201ENST00000215587 PLCH2O75038 1416 aa25.16■■□□□ 1.62
POLR2E-201ENST00000215587 ARHGAP5Q13017 1502 aa25.16■■□□□ 1.62
POLR2E-201ENST00000215587 ARAP3Q8WWN8 1544 aa25.14■■□□□ 1.62
POLR2E-201ENST00000215587 GLI2P10070 1586 aa25.14■■□□□ 1.61
POLR2E-201ENST00000215587 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
POLR2E-201ENST00000215587 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
POLR2E-201ENST00000215587 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
POLR2E-201ENST00000215587 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
POLR2E-201ENST00000215587 CD109Q6YHK3 1445 aa25.1■■□□□ 1.61
POLR2E-201ENST00000215587 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
POLR2E-201ENST00000215587 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
POLR2E-201ENST00000215587 PLEKHH2Q8IVE3 1493 aa25.06■■□□□ 1.6
POLR2E-201ENST00000215587 ITGAEP38570 1179 aa25.05■■□□□ 1.6
POLR2E-201ENST00000215587 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
POLR2E-201ENST00000215587 MAP3K4Q9Y6R4 1608 aa25.04■■□□□ 1.6
POLR2E-201ENST00000215587 FANCAO15360 1455 aa25.03■■□□□ 1.6
POLR2E-201ENST00000215587 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
POLR2E-201ENST00000215587 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
POLR2E-201ENST00000215587 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
POLR2E-201ENST00000215587 DAPK1P53355 1430 aa24.98■■□□□ 1.59
POLR2E-201ENST00000215587 KIAA1107Q9UPP5 1409 aa24.98■■□□□ 1.59
POLR2E-201ENST00000215587 ABCC1P33527 1531 aa24.97■■□□□ 1.59
POLR2E-201ENST00000215587 SYCP2Q9BX26 1530 aa24.97■■□□□ 1.59
POLR2E-201ENST00000215587 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
POLR2E-201ENST00000215587 TEX14Q8IWB6 1497 aa24.96■■□□□ 1.59
POLR2E-201ENST00000215587 NEO1Q92859 1461 aa24.95■■□□□ 1.58
POLR2E-201ENST00000215587 ABCC5O15440 1437 aa24.95■■□□□ 1.58
POLR2E-201ENST00000215587 HNRNPMP52272 730 aaKnown RBP eCLIP24.94■■□□□ 1.58
POLR2E-201ENST00000215587 AKNAQ7Z591 1439 aa24.94■■□□□ 1.58
POLR2E-201ENST00000215587 RSPH4AQ5TD94 716 aa24.93■■□□□ 1.58
POLR2E-201ENST00000215587 CCDC141Q6ZP82 1450 aa24.93■■□□□ 1.58
POLR2E-201ENST00000215587 MBD5Q9P267 1494 aa24.93■■□□□ 1.58
POLR2E-201ENST00000215587 CROCC2H7BZ55 1655 aa24.91■■□□□ 1.58
POLR2E-201ENST00000215587 FBXO41Q8TF61 875 aa24.91■■□□□ 1.58
POLR2E-201ENST00000215587 PTPRKQ15262 1439 aa24.91■■□□□ 1.58
POLR2E-201ENST00000215587 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
POLR2E-201ENST00000215587 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
POLR2E-201ENST00000215587 ARHGEF12Q9NZN5 1544 aa24.88■■□□□ 1.57
POLR2E-201ENST00000215587 TSPY4P0CV99 314 aa24.87■■□□□ 1.57
POLR2E-201ENST00000215587 TSPY10P0CW01 314 aa24.87■■□□□ 1.57
POLR2E-201ENST00000215587 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
POLR2E-201ENST00000215587 C9orf84Q5VXU9 1444 aa24.85■■□□□ 1.57
POLR2E-201ENST00000215587 ROCK1Q13464 1354 aa24.84■■□□□ 1.57
POLR2E-201ENST00000215587 TRAPPC8Q9Y2L5 1435 aa24.84■■□□□ 1.57
POLR2E-201ENST00000215587 ADGBQ8N7X0 1667 aa24.82■■□□□ 1.56
POLR2E-201ENST00000215587 ADGRL2O95490 1459 aa24.82■■□□□ 1.56
POLR2E-201ENST00000215587 MAST1Q9Y2H9 1570 aa24.81■■□□□ 1.56
POLR2E-201ENST00000215587 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
POLR2E-201ENST00000215587 HFM1A2PYH4 1435 aa24.8■■□□□ 1.56
POLR2E-201ENST00000215587 ZNF518AQ6AHZ1 1483 aa24.8■■□□□ 1.56
POLR2E-201ENST00000215587 POGZQ7Z3K3 1410 aa24.79■■□□□ 1.56
POLR2E-201ENST00000215587 DENND4BO75064 1496 aaPredicted RBP24.79■■□□□ 1.56
POLR2E-201ENST00000215587 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
POLR2E-201ENST00000215587 RRP7BPQ9NSQ0 103 aa24.77■■□□□ 1.56
POLR2E-201ENST00000215587 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
POLR2E-201ENST00000215587 SPAG9O60271 1321 aaKnown RBP24.76■■□□□ 1.55
POLR2E-201ENST00000215587 NCOA1Q15788 1441 aa24.76■■□□□ 1.55
POLR2E-201ENST00000215587 NAIPQ13075 1403 aa24.75■■□□□ 1.55
POLR2E-201ENST00000215587 GCC2Q8IWJ2 1684 aa24.75■■□□□ 1.55
POLR2E-201ENST00000215587 RTEL1-TNFRSF6BF6WH68 1400 aa24.74■■□□□ 1.55
POLR2E-201ENST00000215587 PLXNC1O60486 1568 aa24.71■■□□□ 1.55
POLR2E-201ENST00000215587 KDM5CP41229 1560 aa24.71■■□□□ 1.55
POLR2E-201ENST00000215587 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
POLR2E-201ENST00000215587 INO80Q9ULG1 1556 aaPredicted RBP24.71■■□□□ 1.55
POLR2E-201ENST00000215587 ZFYVE16Q7Z3T8 1539 aa24.71■■□□□ 1.55
POLR2E-201ENST00000215587 KIF15Q9NS87 1388 aa24.7■■□□□ 1.55
POLR2E-201ENST00000215587 ATP7AQ04656 1500 aa24.7■■□□□ 1.54
POLR2E-201ENST00000215587 MYT1LQ9UL68 1186 aa24.69■■□□□ 1.54
POLR2E-201ENST00000215587 RICTORQ6R327 1708 aa24.68■■□□□ 1.54
POLR2E-201ENST00000215587 RAPGEF3O95398 923 aa24.67■■□□□ 1.54
POLR2E-201ENST00000215587 MLH3Q9UHC1 1453 aa24.65■■□□□ 1.54
POLR2E-201ENST00000215587 HRCP23327 699 aa24.65■■□□□ 1.54
POLR2E-201ENST00000215587 FRMPD1Q5SYB0 1578 aa24.65■■□□□ 1.54
POLR2E-201ENST00000215587 DUOX2Q9NRD8 1548 aa24.63■■□□□ 1.53
POLR2E-201ENST00000215587 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
POLR2E-201ENST00000215587 ZMYM4Q5VZL5 1548 aa24.62■■□□□ 1.53
POLR2E-201ENST00000215587 KIDINS220Q9ULH0 1771 aa24.61■■□□□ 1.53
POLR2E-201ENST00000215587 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
POLR2E-201ENST00000215587 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.52
POLR2E-201ENST00000215587 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
POLR2E-201ENST00000215587 PTPRMP28827 1452 aa24.54■■□□□ 1.52
POLR2E-201ENST00000215587 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
POLR2E-201ENST00000215587 DIP2CQ9Y2E4 1556 aa24.52■■□□□ 1.52
POLR2E-201ENST00000215587 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
POLR2E-201ENST00000215587 A2MP01023 1474 aa24.51■■□□□ 1.51
POLR2E-201ENST00000215587 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
POLR2E-201ENST00000215587 CCER1Q8TC90 406 aaPredicted RBP24.5■■□□□ 1.51
POLR2E-201ENST00000215587 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
POLR2E-201ENST00000215587 ADAMTSL3P82987 1691 aa24.5■■□□□ 1.51
POLR2E-201ENST00000215587 LMTK3Q96Q04 1460 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms