RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 MyclP10166 368 aa7.4□□□□□ -1.22
Pcdh9-202ENSMUST00000192221 Cwc22Q8C5N3 908 aaKnown RBP7.4□□□□□ -1.22
Pcdh9-202ENSMUST00000192221 Mroh3A0A1D5RM54 893 aa7.4□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Calr4Q3TQS0 420 aa7.39□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 P3h3Q8CG70 732 aa7.39□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 PtmsQ9D0J8 101 aaKnown RBP7.39□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 MsnP26041 577 aaKnown RBP7.38□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Gm7298A0A0N4SVU1 1476 aa7.38□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Mroh2bQ7M6Y6 1581 aa7.38□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Prdm16A2A935 1275 aa7.38□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Dusp9Q7TNL7 452 aa7.38□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 SynmQ70IV5 1561 aa7.38□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Ccdc141E9Q8Q6 1531 aa7.37□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Map4P27546 1125 aaKnown RBP7.37□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Ccdc27Q3V036 639 aa7.37□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Stard8Q8K031 1019 aa7.37□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Hsp90b1P08113 802 aaKnown RBP7.37□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Rad54l2Q99NG0 1466 aa7.37□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Gm973E9Q295 1059 aa7.36□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Pes1Q9EQ61 584 aaKnown RBP7.36□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Ccnb3Q810T2 1396 aa7.36□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Gm20521D3Z5F7 333 aa7.35□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Arhgap31A6X8Z5 1425 aa7.35□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 EprsQ8CGC7 1512 aaKnown RBP7.35□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Fam163aQ8CAA5 168 aa7.34□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Plagl1Q9JLQ4 704 aa7.34□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 ArxO35085 564 aa7.34□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Bcl11aQ9QYE3 773 aa7.34□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Pbrm1Q8BSQ9 1634 aaKnown RBP7.34□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 PnnO35691 725 aaKnown RBP7.34□□□□□ -1.23
Pcdh9-202ENSMUST00000192221 Nup155Q99P88 1391 aaKnown RBP7.34□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Anks4bQ8K3X6 423 aa7.33□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Sart1Q9Z315 806 aaKnown RBP7.33□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Nsd2Q8BVE8 1365 aa7.32□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 AppP12023 770 aa7.32□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 TnnQ80Z71 1560 aa7.32□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Grin2aP35436 1464 aa7.32□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Rgl3Q3UYI5 709 aa7.31□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 MlecQ6ZQI3 291 aaKnown RBP7.31□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Ftsj3Q9DBE9 838 aaKnown RBP7.31□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 HdgfP51859 237 aaKnown RBP7.3□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Kif3bQ61771 747 aa7.3□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Stk24Q99KH8 431 aa7.3□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Exosc9Q9JHI7 438 aaKnown RBP7.3□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 PtprkP35822 1457 aa7.3□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Casc1Q6TDU8 730 aa7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Fhad1A6PWD2 1420 aa7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Stag3O70576 1240 aa7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Card11Q8CIS0 1159 aa7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Arhgap5P97393 1501 aa7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Hmgb1P63158 215 aaKnown RBP7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Psme1P97371 249 aa7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Wdr43Q6ZQL4 677 aaKnown RBP7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Spag9Q58A65 1321 aaKnown RBP7.29□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Eid3Q3V124 375 aa7.28□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Cabp1Q9JLK7 227 aa7.28□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 CanxP35564 591 aaKnown RBP7.28□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Iqcf3Q9D498 203 aa7.28□□□□□ -1.24
Pcdh9-202ENSMUST00000192221 Rrp12Q6P5B0 1295 aaKnown RBP7.27□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Caskin1Q6P9K8 1431 aa7.27□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Ppp4r2Q0VGB7 417 aa7.27□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Vsig10D3YX43 558 aa7.26□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Rock2P70336 1388 aa7.26□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Pkd2O35245 966 aa7.25□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Txndc2Q6P902 515 aa7.25□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Kdm2aP59997 1161 aa7.25□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Ppm1gQ61074 542 aa7.25□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Mphosph9A6H5Y1 991 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Arhgef5E9Q7D5 1581 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Plcb2A3KGF7 1181 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 A2mQ6GQT1 1474 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Slc4a1apE9PX68 744 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Gtf2e1Q9D0D5 440 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Mlh3A0A1Y7VMP7 1443 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Magi1Q6RHR9 1471 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Zbtb4Q5F293 982 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Sycp1Q62209 993 aa7.24□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Hsp90ab1P11499 724 aaKnown RBP7.23□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Neo1P97798 1493 aa7.23□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Becn1O88597 448 aa7.23□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Il16O54824 1322 aa7.23□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Pknox2Q8BG99 474 aa7.23□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Tdrd9Q14BI7 1383 aa7.23□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Kif21aQ9QXL2 1672 aa7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 CenpjQ569L8 1344 aa7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Trim26Q99PN3 545 aa7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Dnajc5bQ9CQ94 199 aa7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 RdxP26043 583 aaKnown RBP7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Ddrgk1Q80WW9 315 aa7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Rusc2Q80U22 1514 aa7.22□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 ErbinQ80TH2 1402 aa7.21□□□□□ -1.25
Pcdh9-202ENSMUST00000192221 Zrsr2Q62377 462 aaKnown RBP7.21□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Trak1Q6PD31 939 aa7.21□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Ankrd36D3Z4K0 1415 aa7.21□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Vps8Q0P5W1 1427 aa7.21□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Chmp4bQ9D8B3 224 aaKnown RBP7.2□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Fancd2Q80V62 1450 aa7.2□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Naip1Q9QWK5 1403 aa7.2□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Tmx4Q8C0L0 335 aa7.2□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Disp1Q3TDN0 1521 aa7.2□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms