RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 CntlnA2AM05 1397 aa27.32■■□□□ 1.96
Sox1-201ENSMUST00000180353 Baz1bQ9Z277 1479 aa27.31■■□□□ 1.96
Sox1-201ENSMUST00000180353 Iqcf3Q9D498 203 aa27.31■■□□□ 1.96
Sox1-201ENSMUST00000180353 Washc2Q6PGL7 1334 aa27.31■■□□□ 1.96
Sox1-201ENSMUST00000180353 Sycp2Q9CUU3 1500 aa27.29■■□□□ 1.96
Sox1-201ENSMUST00000180353 Fhad1A6PWD2 1420 aa27.29■■□□□ 1.96
Sox1-201ENSMUST00000180353 Becn1O88597 448 aa27.29■■□□□ 1.96
Sox1-201ENSMUST00000180353 Armcx1Q9CX83 456 aa27.28■■□□□ 1.96
Sox1-201ENSMUST00000180353 Neurod2Q62414 383 aa27.27■■□□□ 1.96
Sox1-201ENSMUST00000180353 Gm6268A2A3U9 297 aa27.27■■□□□ 1.96
Sox1-201ENSMUST00000180353 Casc1Q6TDU8 730 aa27.26■■□□□ 1.95
Sox1-201ENSMUST00000180353 Ush1cQ9ES64 910 aa27.26■■□□□ 1.95
Sox1-201ENSMUST00000180353 Mak16Q8BGS0 296 aaKnown RBP27.24■■□□□ 1.95
Sox1-201ENSMUST00000180353 Synj1Q8CHC4 1574 aa27.23■■□□□ 1.95
Sox1-201ENSMUST00000180353 NudcO35685 332 aaKnown RBP27.22■■□□□ 1.95
Sox1-201ENSMUST00000180353 Zscan21Q07231 555 aa27.2■■□□□ 1.95
Sox1-201ENSMUST00000180353 ScribQ80U72 1612 aa27.18■■□□□ 1.94
Sox1-201ENSMUST00000180353 Znf326O88291 580 aa27.18■■□□□ 1.94
Sox1-201ENSMUST00000180353 Pkd2O35245 966 aa27.16■■□□□ 1.94
Sox1-201ENSMUST00000180353 Map7d2A2AG50 781 aa27.15■■□□□ 1.94
Sox1-201ENSMUST00000180353 Mtus2Q3UHD3 1353 aa27.14■■□□□ 1.94
Sox1-201ENSMUST00000180353 KnstrnQ9D9Z1 312 aaKnown RBP27.14■■□□□ 1.94
Sox1-201ENSMUST00000180353 Tpm2P58774 284 aa27.14■■□□□ 1.93
Sox1-201ENSMUST00000180353 PtmsQ9D0J8 101 aaKnown RBP27.12■■□□□ 1.93
Sox1-201ENSMUST00000180353 Aebp1Q640N1 1128 aa27.11■■□□□ 1.93
Sox1-201ENSMUST00000180353 Phf14Q9D4H9 881 aa27.11■■□□□ 1.93
Sox1-201ENSMUST00000180353 Arhgap35Q91YM2 1499 aa27.1■■□□□ 1.93
Sox1-201ENSMUST00000180353 Kdm2aP59997 1161 aa27.1■■□□□ 1.93
Sox1-201ENSMUST00000180353 Fyco1Q8VDC1 1437 aa27.1■■□□□ 1.93
Sox1-201ENSMUST00000180353 Kiaa0754Q69ZZ9 979 aa27.08■■□□□ 1.93
Sox1-201ENSMUST00000180353 Ercc6F8VPZ5 1481 aa27.08■■□□□ 1.93
Sox1-201ENSMUST00000180353 DmtnQ9WV69 405 aa27.07■■□□□ 1.92
Sox1-201ENSMUST00000180353 Mphosph9A6H5Y1 991 aa27.05■■□□□ 1.92
Sox1-201ENSMUST00000180353 Eif2s2Q99L45 331 aaKnown RBP27.05■■□□□ 1.92
Sox1-201ENSMUST00000180353 Rundc1Q0VDN7 615 aa27.04■■□□□ 1.92
Sox1-201ENSMUST00000180353 Arhgap27A2AB59 869 aa27.04■■□□□ 1.92
Sox1-201ENSMUST00000180353 Gm973E9Q295 1059 aa27.04■■□□□ 1.92
Sox1-201ENSMUST00000180353 Znf692Q3U381 531 aa27.02■■□□□ 1.92
Sox1-201ENSMUST00000180353 Mroh3A0A1D5RM54 893 aa27.02■■□□□ 1.92
Sox1-201ENSMUST00000180353 Mfap1aC0HKD8 439 aaKnown RBP27.02■■□□□ 1.92
Sox1-201ENSMUST00000180353 Mfap1bC0HKD9 439 aaKnown RBP27.02■■□□□ 1.92
Sox1-201ENSMUST00000180353 Fam43aQ8BUP8 424 aa27■■□□□ 1.91
Sox1-201ENSMUST00000180353 Prkrip1Q9CWV6 186 aaKnown RBP26.97■■□□□ 1.91
Sox1-201ENSMUST00000180353 Kif27Q7M6Z4 1394 aa26.97■■□□□ 1.91
Sox1-201ENSMUST00000180353 Cabp1Q9JLK7 227 aa26.96■■□□□ 1.91
Sox1-201ENSMUST00000180353 Trim30aP15533 496 aa26.96■■□□□ 1.91
Sox1-201ENSMUST00000180353 Speer4f1Q9D5Q6 258 aa26.96■■□□□ 1.91
Sox1-201ENSMUST00000180353 Calcoco2A2A6M5 331 aa26.95■■□□□ 1.9
Sox1-201ENSMUST00000180353 Ak7Q9D2H2 614 aa26.95■■□□□ 1.9
Sox1-201ENSMUST00000180353 Rsph3aQ3UFY4 516 aa26.94■■□□□ 1.9
Sox1-201ENSMUST00000180353 Chmp4bQ9D8B3 224 aaKnown RBP26.94■■□□□ 1.9
Sox1-201ENSMUST00000180353 Gtf3c5Q8R2T8 520 aa26.94■■□□□ 1.9
Sox1-201ENSMUST00000180353 Rrp7aQ9D1C9 280 aaKnown RBP26.93■■□□□ 1.9
Sox1-201ENSMUST00000180353 Ttll13A4Q9F6 804 aa26.93■■□□□ 1.9
Sox1-201ENSMUST00000180353 RdxP26043 583 aaKnown RBP26.9■■□□□ 1.9
Sox1-201ENSMUST00000180353 Kif20aP97329 887 aa26.88■■□□□ 1.89
Sox1-201ENSMUST00000180353 Stard8Q8K031 1019 aa26.86■■□□□ 1.89
Sox1-201ENSMUST00000180353 Rbm10Q99KG3 930 aaKnown RBP26.85■■□□□ 1.89
Sox1-201ENSMUST00000180353 Gm20521D3Z5F7 333 aa26.84■■□□□ 1.89
Sox1-201ENSMUST00000180353 Gpatch11Q3UFS4 262 aa26.84■■□□□ 1.89
Sox1-201ENSMUST00000180353 Trak1Q6PD31 939 aa26.84■■□□□ 1.89
Sox1-201ENSMUST00000180353 Map4P27546 1125 aaKnown RBP26.82■■□□□ 1.88
Sox1-201ENSMUST00000180353 Paxip1Q6NZQ4 1056 aa26.81■■□□□ 1.88
Sox1-201ENSMUST00000180353 Srpk2O54781 681 aaKnown RBP26.81■■□□□ 1.88
Sox1-201ENSMUST00000180353 Pcmtd1P59913 357 aa26.81■■□□□ 1.88
Sox1-201ENSMUST00000180353 Pds5bQ4VA53 1446 aaKnown RBP26.8■■□□□ 1.88
Sox1-201ENSMUST00000180353 TimelessQ9R1X4 1197 aa26.79■■□□□ 1.88
Sox1-201ENSMUST00000180353 Cluap1Q8R3P7 413 aa26.79■■□□□ 1.88
Sox1-201ENSMUST00000180353 Ylpm1Q9R0I7 1386 aaKnown RBP26.78■■□□□ 1.88
Sox1-201ENSMUST00000180353 AampJ3QN89 436 aa26.77■■□□□ 1.88
Sox1-201ENSMUST00000180353 CrbnQ8C7D2 445 aa26.76■■□□□ 1.87
Sox1-201ENSMUST00000180353 Rabep1O35551 862 aa26.76■■□□□ 1.87
Sox1-201ENSMUST00000180353 Isy1Q69ZQ2 285 aaKnown RBP26.73■■□□□ 1.87
Sox1-201ENSMUST00000180353 Slc4a2P13808 1237 aaKnown RBP26.72■■□□□ 1.87
Sox1-201ENSMUST00000180353 Cttnbp2B9EJA2 1648 aa26.71■■□□□ 1.87
Sox1-201ENSMUST00000180353 MccE9PWI3 1003 aa26.71■■□□□ 1.87
Sox1-201ENSMUST00000180353 Carmil1Q6EDY6 1374 aa26.71■■□□□ 1.87
Sox1-201ENSMUST00000180353 Fam13bQ8K2H3 851 aa26.71■■□□□ 1.87
Sox1-201ENSMUST00000180353 GorabQ8BRM2 368 aa26.69■■□□□ 1.86
Sox1-201ENSMUST00000180353 Ccdc183A2AJB1 534 aa26.69■■□□□ 1.86
Sox1-201ENSMUST00000180353 Cspp1B2RX88 1205 aa26.68■■□□□ 1.86
Sox1-201ENSMUST00000180353 Rpap1Q80TE0 1409 aa26.68■■□□□ 1.86
Sox1-201ENSMUST00000180353 Ccnb3Q810T2 1396 aa26.68■■□□□ 1.86
Sox1-201ENSMUST00000180353 Dusp27Q148W8 1138 aa26.68■■□□□ 1.86
Sox1-201ENSMUST00000180353 Kif3aP28741 701 aa26.67■■□□□ 1.86
Sox1-201ENSMUST00000180353 Ifit1bl1D3Z6F0 470 aa26.65■■□□□ 1.86
Sox1-201ENSMUST00000180353 Liat1Q810M6 228 aa26.65■■□□□ 1.86
Sox1-201ENSMUST00000180353 IqubQ8CDK3 788 aa26.65■■□□□ 1.86
Sox1-201ENSMUST00000180353 Cnga1P29974 684 aa26.64■■□□□ 1.86
Sox1-201ENSMUST00000180353 Glipr1l2Q9CQ35 332 aa26.64■■□□□ 1.86
Sox1-201ENSMUST00000180353 Hsp90b1P08113 802 aaKnown RBP26.64■■□□□ 1.86
Sox1-201ENSMUST00000180353 Stk24Q99KH8 431 aa26.64■■□□□ 1.85
Sox1-201ENSMUST00000180353 Usp47Q8BY87 1376 aa26.64■■□□□ 1.85
Sox1-201ENSMUST00000180353 HnrnpuQ8VEK3 800 aaKnown RBP26.63■■□□□ 1.85
Sox1-201ENSMUST00000180353 Rfx1P48377 963 aa26.63■■□□□ 1.85
Sox1-201ENSMUST00000180353 Smarca4Q3TKT4 1613 aaKnown RBP26.62■■□□□ 1.85
Sox1-201ENSMUST00000180353 Exosc9Q9JHI7 438 aaKnown RBP26.61■■□□□ 1.85
Sox1-201ENSMUST00000180353 PnisrA2AJT4 805 aaKnown RBP26.61■■□□□ 1.85
Sox1-201ENSMUST00000180353 Taf3Q5HZG4 932 aa26.61■■□□□ 1.85
Sox1-201ENSMUST00000180353 Kcnh8P59111 1102 aa26.61■■□□□ 1.85
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms