RNA–Protein interactions for RNA: ENSMUST00000168266.7

Ssrp1-209, Transcript of FACT complex subunit SSRP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssrp1, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1-209ENSMUST00000168266 Gpatch8A2A6A1 1505 aa13.73□□□□□ -0.21
Ssrp1-209ENSMUST00000168266 Fyco1Q8VDC1 1437 aa13.73□□□□□ -0.21
Ssrp1-209ENSMUST00000168266 Lmo7E9PYF4 1699 aaKnown RBP13.73□□□□□ -0.21
Ssrp1-209ENSMUST00000168266 Naip5Q9R016 1403 aa13.71□□□□□ -0.21
Ssrp1-209ENSMUST00000168266 Ak9G3UYQ4 1894 aa13.71□□□□□ -0.21
Ssrp1-209ENSMUST00000168266 Samd9lQ69Z37 1561 aa13.71□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 CadpsQ80TJ1 1355 aa13.7□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Naip2Q9QUK4 1447 aa13.69□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Ercc6l2Q9JIM3 1537 aa13.69□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Pak3Q61036 559 aa13.69□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Chd1P40201 1711 aa13.69□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Ube2uB1AUC4 352 aa13.69□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Arhgef11Q68FM7 1552 aa13.68□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Mrs2Q5NCE8 434 aa13.68□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 MlecQ6ZQI3 291 aaKnown RBP13.68□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Hecw2Q6I6G8 1578 aa13.67□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Liat1Q810M6 228 aa13.67□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Soga1E1U8D0 1418 aa13.66□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Rad54l2Q99NG0 1466 aa13.66□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Cux1P53564 1515 aa13.66□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 P3h3Q8CG70 732 aa13.66□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 EprsQ8CGC7 1512 aaKnown RBP13.65□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 Grin2aP35436 1464 aa13.65□□□□□ -0.22
Ssrp1-209ENSMUST00000168266 AdgbG3UZ78 1657 aa13.64□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Peg3Q3URU2 1571 aa13.64□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Slc4a2P13808 1237 aaKnown RBP13.63□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Gm7298A0A0N4SVU1 1476 aa13.63□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 AI481877A2ALV5 1481 aa13.63□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Magi3Q9EQJ9 1476 aa13.62□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Dnajc5gQ8C632 165 aa13.62□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Cul7Q8VE73 1689 aa13.62□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Carmil1Q6EDY6 1374 aa13.61□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 SynmQ70IV5 1561 aa13.61□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 NrdcQ8BHG1 1161 aa13.61□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Egfem1Q8C088 590 aa13.61□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 A2mQ6GQT1 1474 aa13.61□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Wwc2Q6NXJ0 1187 aa13.6□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Mapkbp1Q6NS57 1503 aa13.6□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Dennd4bQ3U1Y4 1499 aa13.6□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Chic2Q9D9G3 165 aa13.6□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Clasp1Q80TV8 1535 aaKnown RBP13.59□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Gm1043A0A140LJC2 1431 aa13.58□□□□□ -0.23
Ssrp1-209ENSMUST00000168266 Gm13695A2AK44 830 aa13.58□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Ttc37F8VPK0 1563 aa13.58□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Ccdc27Q3V036 639 aa13.58□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Exoc6Q8R313 802 aa13.58□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Aebp1Q640N1 1128 aa13.57□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Brwd3A2AHJ4 1799 aa13.57□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Ncoa1P70365 1447 aa13.56□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Upf2A2AT37 1269 aaKnown RBP13.56□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Slc4a3P16283 1227 aa13.55□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Hdac5Q9Z2V6 1113 aa13.55□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Neo1P97798 1493 aa13.54□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Gm14025A2AP89 1413 aa13.53□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Fhod3Q76LL6 1578 aa13.53□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Mphosph9A6H5Y1 991 aa13.53□□□□□ -0.24
Ssrp1-209ENSMUST00000168266 Dnmt1P13864 1620 aaKnown RBP13.51□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 PnisrA2AJT4 805 aaKnown RBP13.51□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Ccnb3Q810T2 1396 aa13.51□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Depdc5P61460 1591 aa13.51□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Pla2r1Q62028 1487 aa13.5□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Ipo9Q91YE6 1041 aa13.5□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Fndc1E9Q043 1732 aa13.49□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Arid3cA6PWV5 409 aa13.48□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Ofd1Q80Z25 1017 aa13.47□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Usp47Q8BY87 1376 aa13.46□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 BC005561E9Q5E2 1589 aa13.46□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Arhgap27A2AB59 869 aa13.46□□□□□ -0.25
Ssrp1-209ENSMUST00000168266 Tcerg1Q8CGF7 1100 aaKnown RBP13.46□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Kcnh8P59111 1102 aa13.45□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Polr1aO35134 1717 aaKnown RBP13.45□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Arhgef12Q8R4H2 1543 aaKnown RBP13.44□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Adamts12Q811B3 1600 aa13.43□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Lmtk2Q3TYD6 1471 aa13.43□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Zfyve16Q80U44 1528 aa13.43□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Pkd2O35245 966 aa13.42□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 L3mbtl2P59178 703 aa13.42□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Rprd2Q6NXI6 1469 aaKnown RBP13.42□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Ccdc9Q8VC31 543 aaKnown RBP13.41□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Hsp90aa1P07901 733 aaKnown RBP13.41□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Mug1P28665 1476 aa13.4□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Abcc2Q8VI47 1543 aa13.4□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 GapdhsQ64467 440 aa13.4□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Map3k4O08648 1597 aa13.4□□□□□ -0.26
Ssrp1-209ENSMUST00000168266 Gtf3c3Q3TMP1 882 aa13.39□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Zfp644E9QA22 1323 aa13.38□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Kdm6bQ5NCY0 1641 aa13.38□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Abca16E9PWJ7 1678 aa13.38□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Ecm2Q5FW85 670 aa13.37□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Abca5Q8K448 1642 aa13.37□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Rfx7F8VPJ6 1459 aa13.36□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Cabp1Q9JLK7 227 aa13.36□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Plekhg5Q66T02 1073 aa13.35□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Amer1Q7TS75 1132 aa13.35□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Gcc2Q8CHG3 1679 aa13.35□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 WizO88286 1684 aaKnown RBP13.35□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Irx3P81067 507 aa13.34□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Cwc22Q8C5N3 908 aaKnown RBP13.34□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 NexmifQ5DTT1 1515 aa13.34□□□□□ -0.27
Ssrp1-209ENSMUST00000168266 Iqcf3Q9D498 203 aa13.33□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms