RNA–Protein interactions for RNA: ENSMUST00000168266.7

Ssrp1-209, Transcript of FACT complex subunit SSRP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssrp1, Length 2,721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1-209ENSMUST00000168266 Gm35339A0A140LHH9 1649 aa18.45■□□□□ 0.54
Ssrp1-209ENSMUST00000168266 NischQ80TM9 1593 aa18.16■□□□□ 0.5
Ssrp1-209ENSMUST00000168266 Abcc9P70170 1546 aa18.05■□□□□ 0.48
Ssrp1-209ENSMUST00000168266 Abcc8B2RUS7 1588 aa17.5■□□□□ 0.39
Ssrp1-209ENSMUST00000168266 ScribQ80U72 1612 aa17.31■□□□□ 0.36
Ssrp1-209ENSMUST00000168266 Dnajc5bQ9CQ94 199 aa17.2■□□□□ 0.34
Ssrp1-209ENSMUST00000168266 Rtl1Q7M732 1744 aa17.18■□□□□ 0.34
Ssrp1-209ENSMUST00000168266 Rhox8Q6VSS7 320 aa17.17■□□□□ 0.34
Ssrp1-209ENSMUST00000168266 Ccdc180J3QNE4 1664 aa17■□□□□ 0.31
Ssrp1-209ENSMUST00000168266 Rpgrip1Q9EPQ2 1331 aa16.99■□□□□ 0.31
Ssrp1-209ENSMUST00000168266 NacadQ5SWP3 1504 aa16.61■□□□□ 0.25
Ssrp1-209ENSMUST00000168266 Acin1Q9JIX8 1338 aaKnown RBP16.56■□□□□ 0.24
Ssrp1-209ENSMUST00000168266 Kdm5dQ62240 1548 aa16.53■□□□□ 0.24
Ssrp1-209ENSMUST00000168266 Zcchc6Q5BLK4 1491 aaKnown RBP16.48■□□□□ 0.23
Ssrp1-209ENSMUST00000168266 Sycp2Q9CUU3 1500 aa16.34■□□□□ 0.21
Ssrp1-209ENSMUST00000168266 Dcaf1Q80TR8 1506 aa16.34■□□□□ 0.21
Ssrp1-209ENSMUST00000168266 Dnajc5P60904 198 aa16.32■□□□□ 0.2
Ssrp1-209ENSMUST00000168266 Ehmt2Q9Z148 1263 aaKnown RBP16.31■□□□□ 0.2
Ssrp1-209ENSMUST00000168266 BicraF8VPZ9 1578 aa16.29■□□□□ 0.2
Ssrp1-209ENSMUST00000168266 Pcgf6Q99NA9 353 aa16.18■□□□□ 0.18
Ssrp1-209ENSMUST00000168266 Thoc2B1AZI6 1594 aaKnown RBP16.15■□□□□ 0.18
Ssrp1-209ENSMUST00000168266 HrcG5E8J6 738 aa16.15■□□□□ 0.18
Ssrp1-209ENSMUST00000168266 Pds5bQ4VA53 1446 aaKnown RBP15.96■□□□□ 0.15
Ssrp1-209ENSMUST00000168266 Ccdc136Q3TVA9 1136 aa15.88■□□□□ 0.13
Ssrp1-209ENSMUST00000168266 Rb1cc1Q9ESK9 1588 aa15.87■□□□□ 0.13
Ssrp1-209ENSMUST00000168266 Cc2d2aQ8CFW7 1633 aa15.87■□□□□ 0.13
Ssrp1-209ENSMUST00000168266 Trim41Q5NCC3 630 aa15.82■□□□□ 0.12
Ssrp1-209ENSMUST00000168266 Supt5hO55201 1082 aaKnown RBP15.78■□□□□ 0.12
Ssrp1-209ENSMUST00000168266 Baz1aO88379 1555 aa15.72■□□□□ 0.11
Ssrp1-209ENSMUST00000168266 Crybg2B7ZCC2 1516 aa15.67■□□□□ 0.1
Ssrp1-209ENSMUST00000168266 Atad2bE9Q166 1460 aaKnown RBP15.64■□□□□ 0.09
Ssrp1-209ENSMUST00000168266 Fam135aQ6NS59 1506 aa15.6■□□□□ 0.09
Ssrp1-209ENSMUST00000168266 Ercc6F8VPZ5 1481 aa15.6■□□□□ 0.09
Ssrp1-209ENSMUST00000168266 Neurod1Q60867 357 aa15.58■□□□□ 0.08
Ssrp1-209ENSMUST00000168266 Cep164Q5DU05 1446 aa15.54■□□□□ 0.08
Ssrp1-209ENSMUST00000168266 Zeb1Q64318 1117 aa15.42■□□□□ 0.06
Ssrp1-209ENSMUST00000168266 Smarca2Q6DIC0 1577 aa15.37■□□□□ 0.05
Ssrp1-209ENSMUST00000168266 Las1lA2BE28 776 aaKnown RBP15.34■□□□□ 0.05
Ssrp1-209ENSMUST00000168266 Phldb1Q6PDH0 1371 aaKnown RBP15.33■□□□□ 0.05
Ssrp1-209ENSMUST00000168266 NefmP08553 848 aa15.31■□□□□ 0.04
Ssrp1-209ENSMUST00000168266 Baz1bQ9Z277 1479 aa15.3■□□□□ 0.04
Ssrp1-209ENSMUST00000168266 Cngb1E1AZ71 1325 aa15.29■□□□□ 0.04
Ssrp1-209ENSMUST00000168266 Ubl4bQ9CQ84 188 aa15.28■□□□□ 0.04
Ssrp1-209ENSMUST00000168266 Mrc2Q64449 1479 aa15.26■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Sall2Q9QX96 1004 aa15.24■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Frmpd1A2AKB4 1549 aa15.24■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Mier1Q5UAK0 511 aa15.23■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Iqgap2Q3UQ44 1575 aa15.23■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Wdr62Q3U3T8 1523 aa15.23■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Gab3Q8BSM5 595 aa15.22■□□□□ 0.03
Ssrp1-209ENSMUST00000168266 Chic1Q8CBW7 227 aa15.19■□□□□ 0.02
Ssrp1-209ENSMUST00000168266 Rsf1E9PWW9 1441 aaKnown RBP15.19■□□□□ 0.02
Ssrp1-209ENSMUST00000168266 Smarca4Q3TKT4 1613 aaKnown RBP15.18■□□□□ 0.02
Ssrp1-209ENSMUST00000168266 Anks4bQ8K3X6 423 aa15.14■□□□□ 0.01
Ssrp1-209ENSMUST00000168266 1700123L14RikQ3V2K7 440 aa15.13■□□□□ 0.01
Ssrp1-209ENSMUST00000168266 Csrnp3P59055 597 aa15.08■□□□□ 0
Ssrp1-209ENSMUST00000168266 Col17a1Q07563 1470 aa15.06■□□□□ 0
Ssrp1-209ENSMUST00000168266 Shroom2A2ALU4 1481 aa15.06■□□□□ 0
Ssrp1-209ENSMUST00000168266 Ccdc88bQ4QRL3 1481 aa15.02□□□□□ -0.01
Ssrp1-209ENSMUST00000168266 Lrriq1Q0P5X1 1673 aa14.98□□□□□ -0.01
Ssrp1-209ENSMUST00000168266 Cecr2E9Q2Z1 1453 aa14.98□□□□□ -0.01
Ssrp1-209ENSMUST00000168266 Wdr66E9Q743 1299 aa14.96□□□□□ -0.01
Ssrp1-209ENSMUST00000168266 Unc13aQ4KUS2 1712 aa14.95□□□□□ -0.02
Ssrp1-209ENSMUST00000168266 Aebp2Q9Z248 504 aaKnown RBP14.93□□□□□ -0.02
Ssrp1-209ENSMUST00000168266 Golga3P55937 1487 aa14.91□□□□□ -0.02
Ssrp1-209ENSMUST00000168266 Brd4Q9ESU6 1400 aaKnown RBP14.91□□□□□ -0.02
Ssrp1-209ENSMUST00000168266 Cdk11bP24788 784 aaKnown RBP14.89□□□□□ -0.03
Ssrp1-209ENSMUST00000168266 Nop58Q6DFW4 536 aaKnown RBP14.86□□□□□ -0.03
Ssrp1-209ENSMUST00000168266 Aplp2Q06335 707 aa14.86□□□□□ -0.03
Ssrp1-209ENSMUST00000168266 UbtfP25976 765 aaKnown RBP14.85□□□□□ -0.03
Ssrp1-209ENSMUST00000168266 ClspnQ80YR7 1315 aa14.84□□□□□ -0.03
Ssrp1-209ENSMUST00000168266 Pcdh10E9PXQ7 1057 aa14.83□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 CenpbP27790 599 aa14.82□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 Cttnbp2B9EJA2 1648 aa14.81□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 Myt1Q8CFC2 1127 aa14.79□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 Pabpn1Q8CCS6 302 aaKnown RBP14.79□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 Synj1Q8CHC4 1574 aa14.78□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 Ppargc1bQ8VHJ7 1014 aa14.77□□□□□ -0.04
Ssrp1-209ENSMUST00000168266 CftrP26361 1476 aa14.76□□□□□ -0.05
Ssrp1-209ENSMUST00000168266 Eif4g3Q80XI3 1579 aaKnown RBP14.73□□□□□ -0.05
Ssrp1-209ENSMUST00000168266 Top2bQ64511 1612 aa14.72□□□□□ -0.05
Ssrp1-209ENSMUST00000168266 Esf1Q3V1V3 845 aaKnown RBP14.69□□□□□ -0.06
Ssrp1-209ENSMUST00000168266 Gm38655A0A286YDK6 273 aa14.67□□□□□ -0.06
Ssrp1-209ENSMUST00000168266 TonslQ6NZL6 1363 aa14.66□□□□□ -0.06
Ssrp1-209ENSMUST00000168266 Kif21aQ9QXL2 1672 aa14.66□□□□□ -0.06
Ssrp1-209ENSMUST00000168266 Pelp1Q9DBD5 1123 aaKnown RBP14.64□□□□□ -0.07
Ssrp1-209ENSMUST00000168266 Rapgef2Q8CHG7 1496 aa14.62□□□□□ -0.07
Ssrp1-209ENSMUST00000168266 Cux2P70298 1426 aa14.61□□□□□ -0.07
Ssrp1-209ENSMUST00000168266 Zcchc11B2RX14 1644 aaKnown RBP14.59□□□□□ -0.07
Ssrp1-209ENSMUST00000168266 Myt1lP97500 1187 aa14.55□□□□□ -0.08
Ssrp1-209ENSMUST00000168266 Arhgef5E9Q7D5 1581 aa14.54□□□□□ -0.08
Ssrp1-209ENSMUST00000168266 Cep162Q6ZQ06 1403 aa14.51□□□□□ -0.09
Ssrp1-209ENSMUST00000168266 Plb1Q3TTY0 1478 aa14.45□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Top2aQ01320 1528 aaKnown RBP14.45□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Plekhg3Q4VAC9 1341 aa14.44□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Kif15Q6P9L6 1387 aa14.44□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Urb2E9Q7L1 1524 aaKnown RBP14.43□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Ttbk1Q6PCN3 1308 aa14.43□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Ncapd3Q6ZQK0 1506 aa14.43□□□□□ -0.1
Ssrp1-209ENSMUST00000168266 Fmn1Q05860 1466 aa14.42□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 78.2 ms