RNA–Protein interactions for RNA: ENSMUST00000167755.2

Trim9-203, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-203ENSMUST00000167755 Zfp644E9QA22 1323 aa12.29□□□□□ -0.44
Trim9-203ENSMUST00000167755 NrkQ9R0G8 1455 aa12.29□□□□□ -0.44
Trim9-203ENSMUST00000167755 Arhgef5E9Q7D5 1581 aa12.28□□□□□ -0.44
Trim9-203ENSMUST00000167755 Mroh2bQ7M6Y6 1581 aa12.28□□□□□ -0.44
Trim9-203ENSMUST00000167755 Ifit1bl1D3Z6F0 470 aa12.28□□□□□ -0.44
Trim9-203ENSMUST00000167755 Psme1P97371 249 aa12.27□□□□□ -0.45
Trim9-203ENSMUST00000167755 Efcab5A0JP43 1406 aa12.26□□□□□ -0.45
Trim9-203ENSMUST00000167755 Camsap1A2AHC3 1581 aa12.26□□□□□ -0.45
Trim9-203ENSMUST00000167755 Ggt6Q6PDE7 497 aa12.26□□□□□ -0.45
Trim9-203ENSMUST00000167755 Ecm2Q5FW85 670 aa12.25□□□□□ -0.45
Trim9-203ENSMUST00000167755 Mrc2Q64449 1479 aa12.25□□□□□ -0.45
Trim9-203ENSMUST00000167755 Exoc6Q8R313 802 aa12.25□□□□□ -0.45
Trim9-203ENSMUST00000167755 Bcl11aQ9QYE3 773 aa12.25□□□□□ -0.45
Trim9-203ENSMUST00000167755 Dhx57Q6P5D3 1388 aaKnown RBP12.24□□□□□ -0.45
Trim9-203ENSMUST00000167755 Rundc1Q0VDN7 615 aa12.24□□□□□ -0.45
Trim9-203ENSMUST00000167755 Wdr43Q6ZQL4 677 aaKnown RBP12.23□□□□□ -0.45
Trim9-203ENSMUST00000167755 Ofd1Q80Z25 1017 aa12.23□□□□□ -0.45
Trim9-203ENSMUST00000167755 Sox12Q04890 314 aa12.22□□□□□ -0.45
Trim9-203ENSMUST00000167755 Znf316Q6PGE4 1016 aa12.22□□□□□ -0.45
Trim9-203ENSMUST00000167755 PogzQ8BZH4 1409 aaKnown RBP12.21□□□□□ -0.45
Trim9-203ENSMUST00000167755 Tdrd9Q14BI7 1383 aa12.21□□□□□ -0.46
Trim9-203ENSMUST00000167755 Slc4a3P16283 1227 aa12.21□□□□□ -0.46
Trim9-203ENSMUST00000167755 Tiam1Q60610 1591 aa12.2□□□□□ -0.46
Trim9-203ENSMUST00000167755 Map3k1P53349 1493 aa12.19□□□□□ -0.46
Trim9-203ENSMUST00000167755 Lamc3Q9R0B6 1581 aa12.18□□□□□ -0.46
Trim9-203ENSMUST00000167755 Usp47Q8BY87 1376 aa12.18□□□□□ -0.46
Trim9-203ENSMUST00000167755 Nup155Q99P88 1391 aaKnown RBP12.18□□□□□ -0.46
Trim9-203ENSMUST00000167755 Cwc22Q8C5N3 908 aaKnown RBP12.18□□□□□ -0.46
Trim9-203ENSMUST00000167755 ArxO35085 564 aa12.17□□□□□ -0.46
Trim9-203ENSMUST00000167755 Cux1P53564 1515 aa12.17□□□□□ -0.46
Trim9-203ENSMUST00000167755 Gtf2e1Q9D0D5 440 aa12.16□□□□□ -0.46
Trim9-203ENSMUST00000167755 Pcf11G3X9Z4 1553 aa12.16□□□□□ -0.46
Trim9-203ENSMUST00000167755 Plekhh2Q8C115 1491 aa12.16□□□□□ -0.46
Trim9-203ENSMUST00000167755 Plin1Q8CGN5 517 aa12.15□□□□□ -0.46
Trim9-203ENSMUST00000167755 Fgd1P52734 960 aa12.15□□□□□ -0.46
Trim9-203ENSMUST00000167755 Fgd6Q69ZL1 1399 aa12.14□□□□□ -0.47
Trim9-203ENSMUST00000167755 Neurod2Q62414 383 aa12.14□□□□□ -0.47
Trim9-203ENSMUST00000167755 Apbb1Q9QXJ1 710 aa12.14□□□□□ -0.47
Trim9-203ENSMUST00000167755 Fhad1A6PWD2 1420 aa12.14□□□□□ -0.47
Trim9-203ENSMUST00000167755 Plb1Q3TTY0 1478 aa12.14□□□□□ -0.47
Trim9-203ENSMUST00000167755 Fan1Q69ZT1 1020 aa12.13□□□□□ -0.47
Trim9-203ENSMUST00000167755 1700019A02RikA0A087WPV9 146 aa12.13□□□□□ -0.47
Trim9-203ENSMUST00000167755 Utp14aQ640M1 767 aaKnown RBP12.13□□□□□ -0.47
Trim9-203ENSMUST00000167755 Spag9Q58A65 1321 aaKnown RBP12.12□□□□□ -0.47
Trim9-203ENSMUST00000167755 Cc2d2bA0A286YDU8 1405 aa12.12□□□□□ -0.47
Trim9-203ENSMUST00000167755 Slx4Q6P1D7 1565 aa12.11□□□□□ -0.47
Trim9-203ENSMUST00000167755 Pip4k2bQ80XI4 416 aa12.1□□□□□ -0.47
Trim9-203ENSMUST00000167755 Rtn4Q99P72 1162 aaKnown RBP12.1□□□□□ -0.47
Trim9-203ENSMUST00000167755 UacaQ8CGB3 1411 aa12.1□□□□□ -0.47
Trim9-203ENSMUST00000167755 Rsph4aQ8BYM7 716 aa12.1□□□□□ -0.47
Trim9-203ENSMUST00000167755 Znf326O88291 580 aa12.1□□□□□ -0.47
Trim9-203ENSMUST00000167755 Gm7298A0A0N4SVU1 1476 aa12.09□□□□□ -0.47
Trim9-203ENSMUST00000167755 Smg6P61406 1418 aaKnown RBP12.09□□□□□ -0.47
Trim9-203ENSMUST00000167755 EprsQ8CGC7 1512 aaKnown RBP12.09□□□□□ -0.47
Trim9-203ENSMUST00000167755 Ankrd26Q811D2 1581 aa12.09□□□□□ -0.47
Trim9-203ENSMUST00000167755 Birc3O08863 600 aa12.09□□□□□ -0.47
Trim9-203ENSMUST00000167755 CadpsQ80TJ1 1355 aa12.09□□□□□ -0.47
Trim9-203ENSMUST00000167755 Vps8Q0P5W1 1427 aa12.08□□□□□ -0.48
Trim9-203ENSMUST00000167755 Mapk8ip3Q9ESN9 1337 aa12.08□□□□□ -0.48
Trim9-203ENSMUST00000167755 Znf710Q3U288 666 aa12.08□□□□□ -0.48
Trim9-203ENSMUST00000167755 Srcin1Q9QWI6 1250 aa12.07□□□□□ -0.48
Trim9-203ENSMUST00000167755 3425401B19RikD3Z1D3 1412 aa12.07□□□□□ -0.48
Trim9-203ENSMUST00000167755 Arhgap31A6X8Z5 1425 aa12.06□□□□□ -0.48
Trim9-203ENSMUST00000167755 Shq1Q7TMX5 569 aa12.05□□□□□ -0.48
Trim9-203ENSMUST00000167755 Gm6268A2A3U9 297 aa12.05□□□□□ -0.48
Trim9-203ENSMUST00000167755 TnnQ80Z71 1560 aa12.04□□□□□ -0.48
Trim9-203ENSMUST00000167755 Nolc1E9Q5C9 702 aaKnown RBP12.04□□□□□ -0.48
Trim9-203ENSMUST00000167755 Ankrd36D3Z4K0 1415 aa12.04□□□□□ -0.48
Trim9-203ENSMUST00000167755 Map3k5O35099 1380 aa12.03□□□□□ -0.48
Trim9-203ENSMUST00000167755 A2mQ6GQT1 1474 aa12.03□□□□□ -0.48
Trim9-203ENSMUST00000167755 Upf2A2AT37 1269 aaKnown RBP12.03□□□□□ -0.48
Trim9-203ENSMUST00000167755 Bcl11bQ99PV8 884 aa12.03□□□□□ -0.48
Trim9-203ENSMUST00000167755 Dcaf11Q91VU6 549 aa12.03□□□□□ -0.48
Trim9-203ENSMUST00000167755 Dhx9O70133 1380 aaKnown RBP12.02□□□□□ -0.48
Trim9-203ENSMUST00000167755 Gm14025A2AP89 1413 aa12.02□□□□□ -0.49
Trim9-203ENSMUST00000167755 SynmQ70IV5 1561 aa12.02□□□□□ -0.49
Trim9-203ENSMUST00000167755 Polr1aO35134 1717 aaKnown RBP12.01□□□□□ -0.49
Trim9-203ENSMUST00000167755 Zfp777B9EKF4 885 aa12.01□□□□□ -0.49
Trim9-203ENSMUST00000167755 Supt16hQ920B9 1047 aa12.01□□□□□ -0.49
Trim9-203ENSMUST00000167755 Naip2Q9QUK4 1447 aa12.01□□□□□ -0.49
Trim9-203ENSMUST00000167755 Q8BT18 775 aa12.01□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ncoa2Q61026 1462 aa12□□□□□ -0.49
Trim9-203ENSMUST00000167755 DaxxO35613 739 aa12□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ift140E9PY46 1464 aa12□□□□□ -0.49
Trim9-203ENSMUST00000167755 Afap1Q80YS6 731 aa12□□□□□ -0.49
Trim9-203ENSMUST00000167755 Dbr1Q923B1 550 aa12□□□□□ -0.49
Trim9-203ENSMUST00000167755 Iqcf3Q9D498 203 aa12□□□□□ -0.49
Trim9-203ENSMUST00000167755 HdgfP51859 237 aaKnown RBP11.99□□□□□ -0.49
Trim9-203ENSMUST00000167755 Dapk1Q80YE7 1442 aa11.99□□□□□ -0.49
Trim9-203ENSMUST00000167755 Senp3Q9EP97 568 aaKnown RBP11.99□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ttll5Q8CHB8 1328 aa11.99□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ubap1lG3UW59 384 aa11.99□□□□□ -0.49
Trim9-203ENSMUST00000167755 Pde4cQ3UEI1 686 aa11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ccdc9Q8VC31 543 aaKnown RBP11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 B4galnt3Q6L8S8 986 aa11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 NexmifQ5DTT1 1515 aa11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ap3b2Q9JME5 1082 aa11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 Slc4a1apE9PX68 744 aa11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 Ythdc1E9Q5K9 736 aaKnown RBP11.98□□□□□ -0.49
Trim9-203ENSMUST00000167755 Crocc2F6XLV1 1638 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms