RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Ddrgk1Q80WW9 315 aa22.19■■□□□ 1.14
Pcf11-201ENSMUST00000119954 Zfp777B9EKF4 885 aa22.17■■□□□ 1.14
Pcf11-201ENSMUST00000119954 Ppp1r18Q8BQ30 594 aa22.16■■□□□ 1.14
Pcf11-201ENSMUST00000119954 Cald1E9QA15 768 aaKnown RBP22.13■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Gtf3c3Q3TMP1 882 aa22.13■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Rrp7aQ9D1C9 280 aaKnown RBP22.13■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Ubap1lG3UW59 384 aa22.1■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Ipo8Q7TMY7 1010 aa22.1■■□□□ 1.13
Pcf11-201ENSMUST00000119954 VgfQ0VGU4 617 aa22.1■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Plin1Q8CGN5 517 aa22.1■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Trim30aP15533 496 aa22.1■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Rassf8Q8CJ96 419 aa22.09■■□□□ 1.13
Pcf11-201ENSMUST00000119954 Becn1O88597 448 aa22.08■■□□□ 1.13
Pcf11-201ENSMUST00000119954 4933402E13RikQ9D4D2 429 aa22.08■■□□□ 1.13
Pcf11-201ENSMUST00000119954 CgnP59242 1191 aa22.08■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Ppm1fQ8CGA0 452 aa22.07■■□□□ 1.12
Pcf11-201ENSMUST00000119954 MlecQ6ZQI3 291 aaKnown RBP22.05■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Iffo2Q8R2V2 512 aa22.05■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Pde3bQ61409 1100 aa22.04■■□□□ 1.12
Pcf11-201ENSMUST00000119954 SlkO54988 1233 aa22.04■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Gpatch11Q3UFS4 262 aa22.04■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Tpm3-rs7D3Z2H9 248 aa22.03■■□□□ 1.12
Pcf11-201ENSMUST00000119954 R3hcc1Q8BSI6 488 aa22.02■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Eif4g2Q62448 906 aaKnown RBP22.02■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Sart3Q9JLI8 962 aaKnown RBP22.02■■□□□ 1.12
Pcf11-201ENSMUST00000119954 Mfap1aC0HKD8 439 aaKnown RBP21.99■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Mfap1bC0HKD9 439 aaKnown RBP21.99■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Cspp1B2RX88 1205 aa21.99■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Speer4f1Q9D5Q6 258 aa21.99■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Prm3Q62100 101 aa21.98■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Isy1Q69ZQ2 285 aaKnown RBP21.98■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Pknox2Q8BG99 474 aa21.96■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Tnnt1O88346 262 aa21.96■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Ush1cQ9ES64 910 aa21.96■■□□□ 1.11
Pcf11-201ENSMUST00000119954 Slc4a1apE9PX68 744 aa21.95■■□□□ 1.1
Pcf11-201ENSMUST00000119954 U2surpQ6NV83 1029 aaKnown RBP21.95■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Fbxo2Q80UW2 297 aa21.94■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Smarce1O54941 411 aaKnown RBP21.93■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Sox12Q04890 314 aa21.93■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Ftsj3Q9DBE9 838 aaKnown RBP21.93■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Eea1Q8BL66 1411 aa21.93■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Tpm3P21107 285 aaKnown RBP21.93■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Noc3lQ8VI84 807 aaKnown RBP21.92■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Rtf1A2AQ19 715 aaKnown RBP21.91■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Mia2Q91ZV0 1396 aa21.91■■□□□ 1.1
Pcf11-201ENSMUST00000119954 CrebrfQ8CDG5 640 aaKnown RBP21.9■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Stk26Q99JT2 416 aa21.9■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Nol10Q5RJG1 687 aaKnown RBP21.9■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Cluap1Q8R3P7 413 aa21.89■■□□□ 1.1
Pcf11-201ENSMUST00000119954 Exoc6Q8R313 802 aa21.89■■□□□ 1.09
Pcf11-201ENSMUST00000119954 MecomP14404 1042 aa21.88■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Podxl2Q8CAE9 603 aa21.87■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Zscan21Q07231 555 aa21.87■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Mtus2Q3UHD3 1353 aa21.86■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Atp6v1dP57746 247 aa21.86■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Dnai2A2AC93 623 aa21.85■■□□□ 1.09
Pcf11-201ENSMUST00000119954 GorabQ8BRM2 368 aa21.85■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Fhad1A6PWD2 1420 aa21.85■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Tmco5bQ80X59 307 aa21.84■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Hspa5P20029 655 aaKnown RBP21.84■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Senp3Q9EP97 568 aaKnown RBP21.84■■□□□ 1.09
Pcf11-201ENSMUST00000119954 ChgaP26339 463 aaKnown RBP21.84■■□□□ 1.09
Pcf11-201ENSMUST00000119954 Rsph3aQ3UFY4 516 aa21.8■■□□□ 1.08
Pcf11-201ENSMUST00000119954 Kif15Q6P9L6 1387 aa21.78■■□□□ 1.08
Pcf11-201ENSMUST00000119954 Sf3a1Q8K4Z5 791 aaKnown RBP21.78■■□□□ 1.08
Pcf11-201ENSMUST00000119954 Arid3cA6PWV5 409 aa21.77■■□□□ 1.08
Pcf11-201ENSMUST00000119954 Rundc1Q0VDN7 615 aa21.77■■□□□ 1.08
Pcf11-201ENSMUST00000119954 Vps53Q8CCB4 832 aa21.77■■□□□ 1.08
Pcf11-201ENSMUST00000119954 Psme1P97371 249 aa21.76■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Mical1Q8VDP3 1048 aa21.76■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Tmf1B9EKI3 1091 aa21.75■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Ccer1Q9CQL2 403 aa21.75■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Golga2Q921M4 999 aa21.75■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Nolc1E9Q5C9 702 aaKnown RBP21.74■■□□□ 1.07
Pcf11-201ENSMUST00000119954 U2af1Q9D883 239 aaKnown RBP21.74■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Znf330Q922H9 316 aa21.73■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Ccdc34Q3UI66 367 aa21.73■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Q3TQI7 289 aaKnown RBP21.72■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Taf3Q5HZG4 932 aa21.72■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Glipr1l2Q9CQ35 332 aa21.72■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Birc3O08863 600 aa21.72■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Chmp3Q9CQ10 224 aa21.72■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Mre11Q61216 706 aa21.71■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Tomm22Q9CPQ3 142 aa21.71■■□□□ 1.07
Pcf11-201ENSMUST00000119954 Chrna2Q91X60 512 aa21.69■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Ciz1Q8VEH2 845 aa21.69■■□□□ 1.06
Pcf11-201ENSMUST00000119954 IbspQ61711 324 aa21.68■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Brpf1B2RRD7 1212 aa21.68■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Txndc2Q6P902 515 aa21.68■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Tpd52l1O54818 204 aa21.67■■□□□ 1.06
Pcf11-201ENSMUST00000119954 HdgfP51859 237 aaKnown RBP21.67■■□□□ 1.06
Pcf11-201ENSMUST00000119954 BccipQ9CWI3 316 aa21.67■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Tpm1P58771 284 aa21.66■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Dusp9Q7TNL7 452 aa21.66■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Sin3aQ60520 1274 aaKnown RBP21.65■■□□□ 1.06
Pcf11-201ENSMUST00000119954 St18Q80TY4 1045 aa21.65■■□□□ 1.06
Pcf11-201ENSMUST00000119954 Pkd2O35245 966 aa21.64■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Ylpm1Q9R0I7 1386 aaKnown RBP21.64■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Gtf2e1Q9D0D5 440 aa21.63■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Abcc8B2RUS7 1588 aa21.63■■□□□ 1.05
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