RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Rhox8Q6VSS7 320 aa30.46■■■□□ 2.47
Pcf11-201ENSMUST00000119954 Rpgrip1Q9EPQ2 1331 aa28.88■■■□□ 2.21
Pcf11-201ENSMUST00000119954 Cngb1E1AZ71 1325 aa28.41■■■□□ 2.14
Pcf11-201ENSMUST00000119954 Las1lA2BE28 776 aaKnown RBP28.34■■■□□ 2.13
Pcf11-201ENSMUST00000119954 Pelp1Q9DBD5 1123 aaKnown RBP27.87■■■□□ 2.05
Pcf11-201ENSMUST00000119954 Ehmt2Q9Z148 1263 aaKnown RBP27.76■■■□□ 2.04
Pcf11-201ENSMUST00000119954 Wdr66E9Q743 1299 aa27.48■■□□□ 1.99
Pcf11-201ENSMUST00000119954 Ube2uB1AUC4 352 aa27.36■■□□□ 1.97
Pcf11-201ENSMUST00000119954 Zeb1Q64318 1117 aa27.06■■□□□ 1.92
Pcf11-201ENSMUST00000119954 Amer1Q7TS75 1132 aa27.06■■□□□ 1.92
Pcf11-201ENSMUST00000119954 Esf1Q3V1V3 845 aaKnown RBP27.04■■□□□ 1.92
Pcf11-201ENSMUST00000119954 CenpbP27790 599 aa26.89■■□□□ 1.9
Pcf11-201ENSMUST00000119954 Ccdc136Q3TVA9 1136 aa26.72■■□□□ 1.87
Pcf11-201ENSMUST00000119954 Gab3Q8BSM5 595 aa26.56■■□□□ 1.84
Pcf11-201ENSMUST00000119954 Npm2Q80W85 207 aa26.55■■□□□ 1.84
Pcf11-201ENSMUST00000119954 Myt1lP97500 1187 aa26.35■■□□□ 1.81
Pcf11-201ENSMUST00000119954 4930567H17RikQ3V0K5 233 aa26.23■■□□□ 1.79
Pcf11-201ENSMUST00000119954 Stra8P70278 393 aa26.22■■□□□ 1.79
Pcf11-201ENSMUST00000119954 Acin1Q9JIX8 1338 aaKnown RBP26.17■■□□□ 1.78
Pcf11-201ENSMUST00000119954 Myt1Q8CFC2 1127 aa26.1■■□□□ 1.77
Pcf11-201ENSMUST00000119954 NefmP08553 848 aa26.06■■□□□ 1.76
Pcf11-201ENSMUST00000119954 Trim41Q5NCC3 630 aa25.98■■□□□ 1.75
Pcf11-201ENSMUST00000119954 Ttbk1Q6PCN3 1308 aa25.92■■□□□ 1.74
Pcf11-201ENSMUST00000119954 Slc24a1Q91WD8 1130 aa25.89■■□□□ 1.74
Pcf11-201ENSMUST00000119954 4933416C03RikQ3V063 378 aa25.8■■□□□ 1.72
Pcf11-201ENSMUST00000119954 Cdk11bP24788 784 aaKnown RBP25.73■■□□□ 1.71
Pcf11-201ENSMUST00000119954 UbtfP25976 765 aaKnown RBP25.66■■□□□ 1.7
Pcf11-201ENSMUST00000119954 Tnnt3Q9QZ47 272 aa25.53■■□□□ 1.68
Pcf11-201ENSMUST00000119954 Pcgf6Q99NA9 353 aa25.48■■□□□ 1.67
Pcf11-201ENSMUST00000119954 Il27Q8K3I6 234 aa25.37■■□□□ 1.65
Pcf11-201ENSMUST00000119954 Nop58Q6DFW4 536 aaKnown RBP25.33■■□□□ 1.64
Pcf11-201ENSMUST00000119954 NrdcQ8BHG1 1161 aa25.32■■□□□ 1.64
Pcf11-201ENSMUST00000119954 NeflP08551 543 aa25.3■■□□□ 1.64
Pcf11-201ENSMUST00000119954 Rtl5Q5DTT4 599 aa25.23■■□□□ 1.63
Pcf11-201ENSMUST00000119954 Anp32bQ9EST5 272 aaKnown RBP25.22■■□□□ 1.63
Pcf11-201ENSMUST00000119954 Os9Q8K2C7 672 aa25.21■■□□□ 1.63
Pcf11-201ENSMUST00000119954 HrcG5E8J6 738 aa25.2■■□□□ 1.62
Pcf11-201ENSMUST00000119954 Neurod1Q60867 357 aa25.16■■□□□ 1.62
Pcf11-201ENSMUST00000119954 Eif5bQ05D44 1216 aaKnown RBP25.12■■□□□ 1.61
Pcf11-201ENSMUST00000119954 DiexfQ8BTT6 772 aaKnown RBP25.05■■□□□ 1.6
Pcf11-201ENSMUST00000119954 Ap3b1Q9Z1T1 1105 aa25.01■■□□□ 1.59
Pcf11-201ENSMUST00000119954 NclP09405 707 aaKnown RBP24.97■■□□□ 1.59
Pcf11-201ENSMUST00000119954 Fam50aQ9WV03 339 aaKnown RBP24.88■■□□□ 1.57
Pcf11-201ENSMUST00000119954 Supt5hO55201 1082 aaKnown RBP24.87■■□□□ 1.57
Pcf11-201ENSMUST00000119954 Ppargc1bQ8VHJ7 1014 aa24.83■■□□□ 1.57
Pcf11-201ENSMUST00000119954 Zbtb7cQ8VCZ7 619 aa24.7■■□□□ 1.55
Pcf11-201ENSMUST00000119954 Ccdc180J3QNE4 1664 aa24.69■■□□□ 1.54
Pcf11-201ENSMUST00000119954 Chic1Q8CBW7 227 aa24.66■■□□□ 1.54
Pcf11-201ENSMUST00000119954 TonslQ6NZL6 1363 aa24.66■■□□□ 1.54
Pcf11-201ENSMUST00000119954 DaxxO35613 739 aa24.66■■□□□ 1.54
Pcf11-201ENSMUST00000119954 Gm13697A2AK42 830 aa24.65■■□□□ 1.54
Pcf11-201ENSMUST00000119954 Anp32aO35381 247 aa24.63■■□□□ 1.53
Pcf11-201ENSMUST00000119954 Ifnlr1Q8CGK5 535 aa24.57■■□□□ 1.52
Pcf11-201ENSMUST00000119954 Plppr3Q7TPB0 716 aa24.4■■□□□ 1.5
Pcf11-201ENSMUST00000119954 NischQ80TM9 1593 aa24.38■■□□□ 1.49
Pcf11-201ENSMUST00000119954 Hnrnpul2Q00PI9 745 aaKnown RBP24.37■■□□□ 1.49
Pcf11-201ENSMUST00000119954 Atp1b4Q99ME6 356 aa24.32■■□□□ 1.48
Pcf11-201ENSMUST00000119954 ClspnQ80YR7 1315 aa24.27■■□□□ 1.48
Pcf11-201ENSMUST00000119954 Zbtb4Q5F293 982 aa24.27■■□□□ 1.48
Pcf11-201ENSMUST00000119954 Mier1Q5UAK0 511 aa24.26■■□□□ 1.47
Pcf11-201ENSMUST00000119954 Prdm10Q3UTQ7 1184 aa24.22■■□□□ 1.47
Pcf11-201ENSMUST00000119954 Erich6D3Z6S9 713 aa24.16■■□□□ 1.46
Pcf11-201ENSMUST00000119954 Gm13695A2AK44 830 aa24.13■■□□□ 1.45
Pcf11-201ENSMUST00000119954 Rtl1Q7M732 1744 aa24.08■■□□□ 1.45
Pcf11-201ENSMUST00000119954 Gm38655A0A286YDK6 273 aa24.05■■□□□ 1.44
Pcf11-201ENSMUST00000119954 CatipB9EKE5 520 aa24.04■■□□□ 1.44
Pcf11-201ENSMUST00000119954 Lmod2Q3UHZ5 550 aa24.04■■□□□ 1.44
Pcf11-201ENSMUST00000119954 Polr3glQ8R0C0 218 aa24.01■■□□□ 1.43
Pcf11-201ENSMUST00000119954 Ythdc1E9Q5K9 736 aaKnown RBP24■■□□□ 1.43
Pcf11-201ENSMUST00000119954 Anks4bQ8K3X6 423 aa24■■□□□ 1.43
Pcf11-201ENSMUST00000119954 Aplp2Q06335 707 aa23.99■■□□□ 1.43
Pcf11-201ENSMUST00000119954 Csrnp3P59055 597 aa23.97■■□□□ 1.43
Pcf11-201ENSMUST00000119954 ArxO35085 564 aa23.97■■□□□ 1.43
Pcf11-201ENSMUST00000119954 Nlrp6Q91WS2 869 aa23.94■■□□□ 1.42
Pcf11-201ENSMUST00000119954 Upf2A2AT37 1269 aaKnown RBP23.89■■□□□ 1.42
Pcf11-201ENSMUST00000119954 Fkbp15Q6P9Q6 1216 aaKnown RBP23.85■■□□□ 1.41
Pcf11-201ENSMUST00000119954 Npm1Q61937 292 aaKnown RBP23.85■■□□□ 1.41
Pcf11-201ENSMUST00000119954 Zcchc6Q5BLK4 1491 aaKnown RBP23.84■■□□□ 1.41
Pcf11-201ENSMUST00000119954 Gm35339A0A140LHH9 1649 aa23.83■■□□□ 1.41
Pcf11-201ENSMUST00000119954 Ccdc9Q8VC31 543 aaKnown RBP23.8■■□□□ 1.4
Pcf11-201ENSMUST00000119954 Mapk8ip2Q9ERE9 830 aa23.78■■□□□ 1.4
Pcf11-201ENSMUST00000119954 Rangap1P46061 589 aaKnown RBP23.77■■□□□ 1.39
Pcf11-201ENSMUST00000119954 Lmod3E9QA62 571 aa23.76■■□□□ 1.39
Pcf11-201ENSMUST00000119954 Ppp4r2Q0VGB7 417 aa23.76■■□□□ 1.39
Pcf11-201ENSMUST00000119954 Calr4Q3TQS0 420 aa23.75■■□□□ 1.39
Pcf11-201ENSMUST00000119954 Sall2Q9QX96 1004 aa23.71■■□□□ 1.39
Pcf11-201ENSMUST00000119954 Hsp90aa1P07901 733 aaKnown RBP23.71■■□□□ 1.39
Pcf11-201ENSMUST00000119954 Abcc9P70170 1546 aa23.7■■□□□ 1.38
Pcf11-201ENSMUST00000119954 Plekhg3Q4VAC9 1341 aa23.68■■□□□ 1.38
Pcf11-201ENSMUST00000119954 Wdr43Q6ZQL4 677 aaKnown RBP23.58■■□□□ 1.37
Pcf11-201ENSMUST00000119954 Trim44Q9QXA7 346 aa23.52■■□□□ 1.36
Pcf11-201ENSMUST00000119954 Eid3Q3V124 375 aa23.51■■□□□ 1.35
Pcf11-201ENSMUST00000119954 DekQ7TNV0 380 aaKnown RBP23.5■■□□□ 1.35
Pcf11-201ENSMUST00000119954 Safb2Q80YR5 991 aaKnown RBP23.48■■□□□ 1.35
Pcf11-201ENSMUST00000119954 Hdac5Q9Z2V6 1113 aa23.43■■□□□ 1.34
Pcf11-201ENSMUST00000119954 Vsig10D3YX43 558 aa23.38■■□□□ 1.33
Pcf11-201ENSMUST00000119954 Rad21Q61550 635 aaKnown RBP23.32■■□□□ 1.32
Pcf11-201ENSMUST00000119954 CanxP35564 591 aaKnown RBP23.3■■□□□ 1.32
Pcf11-201ENSMUST00000119954 Ccer2J3QPU5 274 aa23.3■■□□□ 1.32
Pcf11-201ENSMUST00000119954 Mrs2Q5NCE8 434 aa23.27■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms