RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

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Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Q3TQI7 289 aaKnown RBP18.51■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Gtf2e1Q9D0D5 440 aa18.51■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Nol10Q5RJG1 687 aaKnown RBP18.5■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Htatsf1Q8BGC0 757 aa18.5■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Chmp4bQ9D8B3 224 aaKnown RBP18.5■□□□□ 0.55
Shroom3-202ENSMUST00000113054 U2af1Q9D883 239 aaKnown RBP18.5■□□□□ 0.55
Shroom3-202ENSMUST00000113054 SafbD3YXK2 937 aaKnown RBP18.49■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Eif4g2Q62448 906 aaKnown RBP18.49■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Cluap1Q8R3P7 413 aa18.48■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Kif27Q7M6Z4 1394 aa18.47■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Sin3aQ60520 1274 aaKnown RBP18.47■□□□□ 0.55
Shroom3-202ENSMUST00000113054 MccE9PWI3 1003 aa18.47■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Pkd2O35245 966 aa18.47■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Rpap1Q80TE0 1409 aa18.47■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Rwdd1Q9CQK7 243 aa18.46■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Trak1Q6PD31 939 aa18.46■□□□□ 0.55
Shroom3-202ENSMUST00000113054 Dcaf11Q91VU6 549 aa18.45■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Ppm1gQ61074 542 aa18.44■□□□□ 0.54
Shroom3-202ENSMUST00000113054 KnstrnQ9D9Z1 312 aaKnown RBP18.44■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Mical1Q8VDP3 1048 aa18.44■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Chmp3Q9CQ10 224 aa18.44■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Lemd3Q9WU40 921 aa18.43■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Zfp777B9EKF4 885 aa18.42■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Fhad1A6PWD2 1420 aa18.41■□□□□ 0.54
Shroom3-202ENSMUST00000113054 CgnP59242 1191 aa18.41■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Pak3Q61036 559 aa18.41■□□□□ 0.54
Shroom3-202ENSMUST00000113054 Isy1Q69ZQ2 285 aaKnown RBP18.39■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Iffo2Q8R2V2 512 aa18.39■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Erich6bQ9D4S6 220 aa18.39■□□□□ 0.53
Shroom3-202ENSMUST00000113054 MecomP14404 1042 aa18.38■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Kif3bQ61771 747 aa18.38■□□□□ 0.53
Shroom3-202ENSMUST00000113054 HnrnpuQ8VEK3 800 aaKnown RBP18.38■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Sart3Q9JLI8 962 aaKnown RBP18.38■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Tmf1B9EKI3 1091 aa18.37■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Exoc6Q8R313 802 aa18.37■□□□□ 0.53
Shroom3-202ENSMUST00000113054 1700123L14RikQ3V2K7 440 aa18.37■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Ciz1Q8VEH2 845 aa18.36■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Chrna2Q91X60 512 aa18.36■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Cabp1Q9JLK7 227 aa18.36■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Mia2Q91ZV0 1396 aa18.36■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Brpf1B2RRD7 1212 aa18.35■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Baz1aO88379 1555 aa18.34■□□□□ 0.53
Shroom3-202ENSMUST00000113054 Aebp1Q640N1 1128 aa18.34■□□□□ 0.53
Shroom3-202ENSMUST00000113054 CrebrfQ8CDG5 640 aaKnown RBP18.34■□□□□ 0.53
Shroom3-202ENSMUST00000113054 CrbnQ8C7D2 445 aa18.32■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Golga2Q921M4 999 aa18.32■□□□□ 0.52
Shroom3-202ENSMUST00000113054 GorabQ8BRM2 368 aa18.32■□□□□ 0.52
Shroom3-202ENSMUST00000113054 HdgfP51859 237 aaKnown RBP18.32■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Mfap1aC0HKD8 439 aaKnown RBP18.31■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Mfap1bC0HKD9 439 aaKnown RBP18.31■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Supt16hQ920B9 1047 aa18.31■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Ccdc27Q3V036 639 aa18.3■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Spag9Q58A65 1321 aaKnown RBP18.3■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Vps53Q8CCB4 832 aa18.29■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Mphosph9A6H5Y1 991 aa18.28■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Fan1Q69ZT1 1020 aa18.27■□□□□ 0.52
Shroom3-202ENSMUST00000113054 Chmp5Q9D7S9 219 aa18.26■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Ksr2Q3UVC0 959 aa18.26■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Ccdc9Q8VC31 543 aaKnown RBP18.25■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Rock2P70336 1388 aa18.25■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Bcl11bQ99PV8 884 aa18.25■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Dnttip2Q8R2M2 758 aaKnown RBP18.24■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Slc4a10Q5DTL9 1118 aa18.24■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Ap3b2Q9JME5 1082 aa18.24■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Tomm22Q9CPQ3 142 aa18.23■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Tcerg1Q8CGF7 1100 aaKnown RBP18.23■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Utp14aQ640M1 767 aaKnown RBP18.22■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Cabp4Q8VHC5 271 aa18.21■□□□□ 0.51
Shroom3-202ENSMUST00000113054 Slc4a1apE9PX68 744 aa18.2■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Adam1bQ8R534 806 aa18.19■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Dnai2A2AC93 623 aa18.19■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Zscan21Q07231 555 aa18.19■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Srcin1Q9QWI6 1250 aa18.18■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Nup155Q99P88 1391 aaKnown RBP18.18■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Tpm3-rs7D3Z2H9 248 aa18.18■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Mbd3Q9Z2D8 285 aaKnown RBP18.18■□□□□ 0.5
Shroom3-202ENSMUST00000113054 AppP12023 770 aa18.17■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Mak16Q8BGS0 296 aaKnown RBP18.17■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Cc2d1aQ8K1A6 943 aa18.16■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Ccdc146E9Q9F7 977 aa18.16■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Pip4k2bQ80XI4 416 aa18.16■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Noc3lQ8VI84 807 aaKnown RBP18.16■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Prm3Q62100 101 aa18.15■□□□□ 0.5
Shroom3-202ENSMUST00000113054 EspnQ9ET47 871 aa18.15■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Gm973E9Q295 1059 aa18.15■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Baz1bQ9Z277 1479 aa18.14■□□□□ 0.5
Shroom3-202ENSMUST00000113054 Gpatch11Q3UFS4 262 aa18.12■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Dnai1Q8C0M8 701 aa18.12■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Tsen2Q6P7W5 460 aa18.11■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Shq1Q7TMX5 569 aa18.11■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Sart1Q9Z315 806 aaKnown RBP18.1■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Pde3bQ61409 1100 aa18.1■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Kdm5dQ62240 1548 aa18.09■□□□□ 0.49
Shroom3-202ENSMUST00000113054 CenpjQ569L8 1344 aa18.09■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Mink1Q9JM52 1308 aa18.09■□□□□ 0.49
Shroom3-202ENSMUST00000113054 Tpd52l1O54818 204 aa18.08■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Ccar1Q8CH18 1146 aaKnown RBP18.08■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Ccdc88bQ4QRL3 1481 aa18.08■□□□□ 0.48
Shroom3-202ENSMUST00000113054 R3hcc1Q8BSI6 488 aa18.07■□□□□ 0.48
Shroom3-202ENSMUST00000113054 Ncbp3Q8BZR9 615 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms