RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Rrp7aQ9D1C9 280 aaKnown RBP8.12□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Tnnt1O88346 262 aa8.11□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Csrnp3P59055 597 aa8.11□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Anks4bQ8K3X6 423 aa8.11□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Golga3P55937 1487 aa8.11□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Tpm3P21107 285 aaKnown RBP8.11□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Vsig10D3YX43 558 aa8.11□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Lemd3Q9WU40 921 aa8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Smc4Q8CG47 1286 aa8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Evc2Q8K1G2 1220 aa8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 UvssaQ9D479 717 aa8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Fyco1Q8VDC1 1437 aa8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 RdxP26043 583 aaKnown RBP8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Tmf1B9EKI3 1091 aa8.1□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 AU015836B2RUM3 263 aa8.09□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 MecomP14404 1042 aa8.09□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 Tpm1P58771 284 aa8.09□□□□□ -1.11
Trp53bp1-201ENSMUST00000110647 WrnO09053 1401 aa8.08□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Ap3b2Q9JME5 1082 aa8.08□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Isy1Q69ZQ2 285 aaKnown RBP8.08□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Lrrcc1Q69ZB0 1026 aa8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Psme1P97371 249 aa8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Ipo7Q9EPL8 1038 aaKnown RBP8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Aebp2Q9Z248 504 aaKnown RBP8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Rwdd1Q9CQK7 243 aa8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Kri1Q8VDQ9 704 aaKnown RBP8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 1700019A02RikA0A087WPV9 146 aa8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Q3TQI7 289 aaKnown RBP8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Vps53Q8CCB4 832 aa8.07□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Hap1O35668 628 aa8.06□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Stk24Q99KH8 431 aa8.06□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Ftsj3Q9DBE9 838 aaKnown RBP8.06□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Glipr1l2Q9CQ35 332 aa8.06□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Rock2P70336 1388 aa8.06□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Q8BT18 775 aa8.06□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Tpd52l1O54818 204 aa8.05□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Ppm1fQ8CGA0 452 aa8.05□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 MsnP26041 577 aaKnown RBP8.05□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Znf710Q3U288 666 aa8.05□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Cspp1B2RX88 1205 aa8.05□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Cplx2P84086 134 aa8.05□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Ccdc27Q3V036 639 aa8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Txndc2Q6P902 515 aa8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Srek1Q8BZX4 494 aaKnown RBP8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 AknaQ80VW7 1404 aa8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Cgnl1Q6AW69 1298 aa8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Kif27Q7M6Z4 1394 aa8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Zrsr2Q62377 462 aaKnown RBP8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Gm21969J3QJZ1 289 aa8.04□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 4933402E13RikQ9D4D2 429 aa8.03□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Hook1Q8BIL5 728 aa8.03□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Chmp3Q9CQ10 224 aa8.03□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Gtf2e1Q9D0D5 440 aa8.03□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 MlecQ6ZQI3 291 aaKnown RBP8.03□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Polr1aO35134 1717 aaKnown RBP8.02□□□□□ -1.12
Trp53bp1-201ENSMUST00000110647 Tnnt2P50752 301 aa8.02□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Cetn4Q8K4K1 168 aa8.02□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Tomm22Q9CPQ3 142 aa8.02□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Gnl3lQ6PGG6 577 aaKnown RBP8.02□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Ppp4r3bQ922R5 820 aa8.01□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Mapk8ip2Q9ERE9 830 aa8.01□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 AampJ3QN89 436 aa8.01□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Plekhh2Q8C115 1491 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Ccnb3Q810T2 1396 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Ccer1Q9CQL2 403 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 CenpjQ569L8 1344 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Hoxa7P02830 229 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Chmp4cQ9D7F7 232 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Egfem1Q8C088 590 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Kif3aP28741 701 aa8□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Ciz1Q8VEH2 845 aa7.99□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Becn1O88597 448 aa7.99□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Nap1l2P51860 460 aa7.99□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Dusp9Q7TNL7 452 aa7.99□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Prm3Q62100 101 aa7.98□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Ccdc43Q9CR29 222 aaKnown RBP7.98□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Gprasp1Q5U4C1 1347 aa7.98□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Map4P27546 1125 aaKnown RBP7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Pcmtd1P59913 357 aa7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Krt82Q99M74 516 aa7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Chaf1aQ9QWF0 911 aa7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Neurod2Q62414 383 aa7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Arhgap35Q91YM2 1499 aa7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 PhaxQ9JJT9 385 aaKnown RBP7.97□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Pak3Q61036 559 aa7.96□□□□□ -1.13
Trp53bp1-201ENSMUST00000110647 Fmn1Q05860 1466 aa7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 U2surpQ6NV83 1029 aaKnown RBP7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Kif3cO35066 796 aa7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Ccdc34Q3UI66 367 aa7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Necab1Q8BG18 352 aa7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Paf1Q8K2T8 535 aa7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Erich6bQ9D4S6 220 aa7.96□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Supt16hQ920B9 1047 aa7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Ccar1Q8CH18 1146 aaKnown RBP7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Chmp7Q8R1T1 451 aa7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Baz1bQ9Z277 1479 aa7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 St18Q80TY4 1045 aa7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 U2af1Q9D883 239 aaKnown RBP7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Ncoa2Q61026 1462 aa7.95□□□□□ -1.14
Trp53bp1-201ENSMUST00000110647 Rnf20Q5DTM8 973 aa7.94□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms