RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Rhox8Q6VSS7 320 aa11.07□□□□□ -0.64
Trp53bp1-201ENSMUST00000110647 Cngb1E1AZ71 1325 aa10.4□□□□□ -0.75
Trp53bp1-201ENSMUST00000110647 Rpgrip1Q9EPQ2 1331 aa10.38□□□□□ -0.75
Trp53bp1-201ENSMUST00000110647 Pelp1Q9DBD5 1123 aaKnown RBP10.37□□□□□ -0.75
Trp53bp1-201ENSMUST00000110647 Wdr66E9Q743 1299 aa10.1□□□□□ -0.79
Trp53bp1-201ENSMUST00000110647 Las1lA2BE28 776 aaKnown RBP10.08□□□□□ -0.8
Trp53bp1-201ENSMUST00000110647 Ube2uB1AUC4 352 aa9.99□□□□□ -0.81
Trp53bp1-201ENSMUST00000110647 Esf1Q3V1V3 845 aaKnown RBP9.98□□□□□ -0.81
Trp53bp1-201ENSMUST00000110647 Zeb1Q64318 1117 aa9.91□□□□□ -0.82
Trp53bp1-201ENSMUST00000110647 Trim41Q5NCC3 630 aa9.81□□□□□ -0.84
Trp53bp1-201ENSMUST00000110647 Stra8P70278 393 aa9.79□□□□□ -0.84
Trp53bp1-201ENSMUST00000110647 Npm2Q80W85 207 aa9.79□□□□□ -0.84
Trp53bp1-201ENSMUST00000110647 Rtl1Q7M732 1744 aa9.7□□□□□ -0.86
Trp53bp1-201ENSMUST00000110647 4930567H17RikQ3V0K5 233 aa9.65□□□□□ -0.86
Trp53bp1-201ENSMUST00000110647 Anp32bQ9EST5 272 aaKnown RBP9.58□□□□□ -0.88
Trp53bp1-201ENSMUST00000110647 Ccdc136Q3TVA9 1136 aa9.56□□□□□ -0.88
Trp53bp1-201ENSMUST00000110647 Myt1lP97500 1187 aa9.47□□□□□ -0.89
Trp53bp1-201ENSMUST00000110647 NischQ80TM9 1593 aa9.46□□□□□ -0.9
Trp53bp1-201ENSMUST00000110647 Ccdc180J3QNE4 1664 aa9.45□□□□□ -0.9
Trp53bp1-201ENSMUST00000110647 NefmP08553 848 aa9.45□□□□□ -0.9
Trp53bp1-201ENSMUST00000110647 Amer1Q7TS75 1132 aa9.44□□□□□ -0.9
Trp53bp1-201ENSMUST00000110647 CenpbP27790 599 aa9.4□□□□□ -0.91
Trp53bp1-201ENSMUST00000110647 NeflP08551 543 aa9.39□□□□□ -0.91
Trp53bp1-201ENSMUST00000110647 Gab3Q8BSM5 595 aa9.38□□□□□ -0.91
Trp53bp1-201ENSMUST00000110647 NclP09405 707 aaKnown RBP9.35□□□□□ -0.91
Trp53bp1-201ENSMUST00000110647 Ehmt2Q9Z148 1263 aaKnown RBP9.32□□□□□ -0.92
Trp53bp1-201ENSMUST00000110647 Hdac5Q9Z2V6 1113 aa9.31□□□□□ -0.92
Trp53bp1-201ENSMUST00000110647 NrdcQ8BHG1 1161 aa9.29□□□□□ -0.92
Trp53bp1-201ENSMUST00000110647 Os9Q8K2C7 672 aa9.27□□□□□ -0.93
Trp53bp1-201ENSMUST00000110647 Tnnt3Q9QZ47 272 aa9.22□□□□□ -0.93
Trp53bp1-201ENSMUST00000110647 Myt1Q8CFC2 1127 aa9.16□□□□□ -0.94
Trp53bp1-201ENSMUST00000110647 Gm13697A2AK42 830 aa9.14□□□□□ -0.95
Trp53bp1-201ENSMUST00000110647 UbtfP25976 765 aaKnown RBP9.14□□□□□ -0.95
Trp53bp1-201ENSMUST00000110647 DiexfQ8BTT6 772 aaKnown RBP9.11□□□□□ -0.95
Trp53bp1-201ENSMUST00000110647 Slc24a1Q91WD8 1130 aa9.11□□□□□ -0.95
Trp53bp1-201ENSMUST00000110647 Il27Q8K3I6 234 aa9.1□□□□□ -0.95
Trp53bp1-201ENSMUST00000110647 Rtl5Q5DTT4 599 aa9.08□□□□□ -0.96
Trp53bp1-201ENSMUST00000110647 4933416C03RikQ3V063 378 aa9.07□□□□□ -0.96
Trp53bp1-201ENSMUST00000110647 Fam50aQ9WV03 339 aaKnown RBP9.06□□□□□ -0.96
Trp53bp1-201ENSMUST00000110647 Acin1Q9JIX8 1338 aaKnown RBP9.02□□□□□ -0.96
Trp53bp1-201ENSMUST00000110647 HrcG5E8J6 738 aa9.02□□□□□ -0.96
Trp53bp1-201ENSMUST00000110647 Cdk11bP24788 784 aaKnown RBP9.01□□□□□ -0.97
Trp53bp1-201ENSMUST00000110647 Zcchc6Q5BLK4 1491 aaKnown RBP8.98□□□□□ -0.97
Trp53bp1-201ENSMUST00000110647 Npm1Q61937 292 aaKnown RBP8.97□□□□□ -0.97
Trp53bp1-201ENSMUST00000110647 Gm13695A2AK44 830 aa8.96□□□□□ -0.97
Trp53bp1-201ENSMUST00000110647 Eif5bQ05D44 1216 aaKnown RBP8.96□□□□□ -0.97
Trp53bp1-201ENSMUST00000110647 Neurod1Q60867 357 aa8.93□□□□□ -0.98
Trp53bp1-201ENSMUST00000110647 Nlrp6Q91WS2 869 aa8.87□□□□□ -0.99
Trp53bp1-201ENSMUST00000110647 Hnrnpul2Q00PI9 745 aaKnown RBP8.87□□□□□ -0.99
Trp53bp1-201ENSMUST00000110647 Atp1b4Q99ME6 356 aa8.85□□□□□ -0.99
Trp53bp1-201ENSMUST00000110647 TonslQ6NZL6 1363 aa8.84□□□□□ -0.99
Trp53bp1-201ENSMUST00000110647 Ttbk1Q6PCN3 1308 aa8.84□□□□□ -0.99
Trp53bp1-201ENSMUST00000110647 Abcc9P70170 1546 aa8.82□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Hsp90aa1P07901 733 aaKnown RBP8.82□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Nop58Q6DFW4 536 aaKnown RBP8.8□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Upf2A2AT37 1269 aaKnown RBP8.78□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Ap3b1Q9Z1T1 1105 aa8.78□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Zfp777B9EKF4 885 aa8.78□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Ccer2J3QPU5 274 aa8.78□□□□□ -1
Trp53bp1-201ENSMUST00000110647 Clstn2Q9ER65 966 aa8.77□□□□□ -1.01
Trp53bp1-201ENSMUST00000110647 Znf326O88291 580 aa8.77□□□□□ -1.01
Trp53bp1-201ENSMUST00000110647 Safb2Q80YR5 991 aaKnown RBP8.76□□□□□ -1.01
Trp53bp1-201ENSMUST00000110647 Erich6D3Z6S9 713 aa8.74□□□□□ -1.01
Trp53bp1-201ENSMUST00000110647 Gm35339A0A140LHH9 1649 aa8.74□□□□□ -1.01
Trp53bp1-201ENSMUST00000110647 Brd4Q9ESU6 1400 aaKnown RBP8.73□□□□□ -1.01
Trp53bp1-201ENSMUST00000110647 CatipB9EKE5 520 aa8.68□□□□□ -1.02
Trp53bp1-201ENSMUST00000110647 Zbtb7cQ8VCZ7 619 aa8.66□□□□□ -1.02
Trp53bp1-201ENSMUST00000110647 Chic1Q8CBW7 227 aa8.65□□□□□ -1.02
Trp53bp1-201ENSMUST00000110647 Ifnlr1Q8CGK5 535 aa8.64□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 Anp32aO35381 247 aa8.63□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 Eif4g2Q62448 906 aaKnown RBP8.62□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 Supt5hO55201 1082 aaKnown RBP8.61□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 Polr3glQ8R0C0 218 aa8.61□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 DaxxO35613 739 aa8.61□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 Chmp4bQ9D8B3 224 aaKnown RBP8.6□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 ClspnQ80YR7 1315 aa8.59□□□□□ -1.03
Trp53bp1-201ENSMUST00000110647 Fgd1P52734 960 aa8.57□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 Ythdc1E9Q5K9 736 aaKnown RBP8.55□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 Lmod2Q3UHZ5 550 aa8.55□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 Ccdc9Q8VC31 543 aaKnown RBP8.55□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 Dnai2A2AC93 623 aa8.53□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 Rb1cc1Q9ESK9 1588 aa8.53□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 IqubQ8CDK3 788 aa8.52□□□□□ -1.04
Trp53bp1-201ENSMUST00000110647 Adam1bQ8R534 806 aa8.52□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 PnnO35691 725 aaKnown RBP8.51□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Plppr3Q7TPB0 716 aa8.51□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Ercc6F8VPZ5 1481 aa8.5□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Iqcf3Q9D498 203 aa8.5□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Clip1Q922J3 1391 aa8.48□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Ccdc18Q640L5 1455 aa8.48□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Ubl4bQ9CQ84 188 aa8.48□□□□□ -1.05
Trp53bp1-201ENSMUST00000110647 Pde3bQ61409 1100 aa8.46□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 HdgfP51859 237 aaKnown RBP8.46□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 P3h3Q8CG70 732 aa8.45□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Plekhg3Q4VAC9 1341 aa8.44□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Trim44Q9QXA7 346 aa8.43□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Fkbp15Q6P9Q6 1216 aaKnown RBP8.43□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Prdm10Q3UTQ7 1184 aa8.41□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Rsph4aQ8BYM7 716 aa8.41□□□□□ -1.06
Trp53bp1-201ENSMUST00000110647 Pcgf6Q99NA9 353 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms