RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Ipo4Q8VI75 1082 aa18.52■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 MccE9PWI3 1003 aa18.52■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Ccdc88bQ4QRL3 1481 aa18.52■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Rrp9Q91WM3 475 aaKnown RBP18.51■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Arhgap35Q91YM2 1499 aa18.49■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 RdxP26043 583 aaKnown RBP18.48■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Sin3aQ60520 1274 aaKnown RBP18.48■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 HnrnpuQ8VEK3 800 aaKnown RBP18.47■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 SlkO54988 1233 aa18.47■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Kif15Q6P9L6 1387 aa18.46■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Mtus2Q3UHD3 1353 aa18.46■□□□□ 0.55
Pcdha1-201ENSMUST00000070797 Kiaa0754Q69ZZ9 979 aa18.45■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Fbxo2Q80UW2 297 aa18.44■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Rtn4Q99P72 1162 aaKnown RBP18.43■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Speer4f1Q9D5Q6 258 aa18.42■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Fyco1Q8VDC1 1437 aa18.42■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Rundc1Q0VDN7 615 aa18.42■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Znf710Q3U288 666 aa18.42■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Rsph3aQ3UFY4 516 aa18.41■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Gtf2a1Q99PM3 378 aa18.4■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Gm6268A2A3U9 297 aa18.4■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Mroh3A0A1D5RM54 893 aa18.4■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Sart3Q9JLI8 962 aaKnown RBP18.4■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Trim30aP15533 496 aa18.39■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Fmn1Q05860 1466 aa18.39■□□□□ 0.54
Pcdha1-201ENSMUST00000070797 Pkd2O35245 966 aa18.39■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Mfap1aC0HKD8 439 aaKnown RBP18.39■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Mfap1bC0HKD9 439 aaKnown RBP18.39■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Tpm2P58774 284 aa18.39■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 IqubQ8CDK3 788 aa18.38■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Crybg2B7ZCC2 1516 aa18.38■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Srpk2O54781 681 aaKnown RBP18.37■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Hsp90b1P08113 802 aaKnown RBP18.37■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Cspp1B2RX88 1205 aa18.36■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 AampJ3QN89 436 aa18.36■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Rock2P70336 1388 aa18.36■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Cald1E9QA15 768 aaKnown RBP18.36■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Ylpm1Q9R0I7 1386 aaKnown RBP18.36■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Tmf1B9EKI3 1091 aa18.35■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 PnnO35691 725 aaKnown RBP18.34■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Gm20521D3Z5F7 333 aa18.34■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Glipr1l2Q9CQ35 332 aa18.33■□□□□ 0.53
Pcdha1-201ENSMUST00000070797 Pcmtd1P59913 357 aa18.33■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Kdm2aP59997 1161 aa18.33■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 SetQ9EQU5 289 aaKnown RBP18.3■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Mphosph9A6H5Y1 991 aa18.3■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Smarce1O54941 411 aaKnown RBP18.3■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Iqcf3Q9D498 203 aa18.29■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Atp6v1dP57746 247 aa18.28■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Zfp777B9EKF4 885 aa18.28■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Prkrip1Q9CWV6 186 aaKnown RBP18.27■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Phf14Q9D4H9 881 aa18.27■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Washc2Q6PGL7 1334 aa18.27■□□□□ 0.52
Pcdha1-201ENSMUST00000070797 Golga2Q921M4 999 aa18.26■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Smarca2Q6DIC0 1577 aa18.26■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Znf326O88291 580 aa18.26■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Exosc9Q9JHI7 438 aaKnown RBP18.25■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Arhgap27A2AB59 869 aa18.24■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Pde3bQ61409 1100 aa18.23■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Rabep1O35551 862 aa18.22■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Pes1Q9EQ61 584 aaKnown RBP18.21■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Ankrd36D3Z4K0 1415 aa18.21■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Ak7Q9D2H2 614 aa18.21■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Isy1Q69ZQ2 285 aaKnown RBP18.21■□□□□ 0.51
Pcdha1-201ENSMUST00000070797 Kif16bB1AVY7 1312 aa18.2■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Cluap1Q8R3P7 413 aa18.2■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Eif2s2Q99L45 331 aaKnown RBP18.2■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 BccipQ9CWI3 316 aa18.2■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Pak3Q61036 559 aa18.19■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Cgnl1Q6AW69 1298 aa18.19■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 R3hcc1Q8BSI6 488 aa18.19■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Gpatch11Q3UFS4 262 aa18.18■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 CrbnQ8C7D2 445 aa18.18■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Casq1O09165 405 aa18.17■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Ccar1Q8CH18 1146 aaKnown RBP18.17■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Kif3aP28741 701 aa18.17■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Taf3Q5HZG4 932 aa18.17■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Rapgef2Q8CHG7 1496 aa18.17■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Kif20aP97329 887 aa18.16■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Sycp2Q9CUU3 1500 aa18.15■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Ccdc173A0JLY1 547 aa18.15■□□□□ 0.5
Pcdha1-201ENSMUST00000070797 Pds5bQ4VA53 1446 aaKnown RBP18.14■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 GorabQ8BRM2 368 aa18.14■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 UacaQ8CGB3 1411 aa18.13■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 ScribQ80U72 1612 aa18.13■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Map4P27546 1125 aaKnown RBP18.12■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Stag3O70576 1240 aa18.12■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Rock1P70335 1354 aa18.12■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 IbspQ61711 324 aa18.11■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Rrp7aQ9D1C9 280 aaKnown RBP18.11■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Kif27Q7M6Z4 1394 aa18.11■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Ttll13A4Q9F6 804 aa18.11■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Kif4P33174 1231 aa18.1■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 CgnP59242 1191 aa18.1■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 St18Q80TY4 1045 aa18.1■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Fam43aQ8BUP8 424 aa18.09■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Sf3a1Q8K4Z5 791 aaKnown RBP18.09■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Gripap1Q8VD04 806 aa18.09■□□□□ 0.49
Pcdha1-201ENSMUST00000070797 Atl3Q91YH5 541 aa18.07■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Aebp1Q640N1 1128 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms