RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Anp32eP97822 260 aaKnown RBP13.02□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Rwdd1Q9CQK7 243 aa13.02□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Cwc22Q8C5N3 908 aaKnown RBP13.02□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Mapk8ip3Q9ESN9 1337 aa13.02□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Neurod2Q62414 383 aa13.01□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Ipo8Q7TMY7 1010 aa13□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Mre11Q61216 706 aa13□□□□□ -0.33
Col6a3-201ENSMUST00000056925 AppP12023 770 aa13□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Ccdc34Q3UI66 367 aa12.99□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Pnmal2G3X9N3 661 aa12.99□□□□□ -0.33
Col6a3-201ENSMUST00000056925 ChgaP26339 463 aaKnown RBP12.99□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Rb1cc1Q9ESK9 1588 aa12.98□□□□□ -0.33
Col6a3-201ENSMUST00000056925 AcrbpQ3V140 540 aa12.98□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Tpm3-rs7D3Z2H9 248 aa12.97□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Tpm3P21107 285 aaKnown RBP12.97□□□□□ -0.33
Col6a3-201ENSMUST00000056925 Ralbp1Q62172 648 aa12.96□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Sh3bp5Q9Z131 463 aa12.96□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Fam13bQ8K2H3 851 aa12.96□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Irx6Q9ER75 438 aa12.95□□□□□ -0.34
Col6a3-201ENSMUST00000056925 BbxQ8VBW5 907 aa12.95□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Clstn1Q9EPL2 979 aa12.95□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Anapc15P60007 132 aa12.95□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Card11Q8CIS0 1159 aa12.94□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Nolc1E9Q5C9 702 aaKnown RBP12.94□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Gm6268A2A3U9 297 aa12.94□□□□□ -0.34
Col6a3-201ENSMUST00000056925 NudcO35685 332 aaKnown RBP12.94□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Rsph3aQ3UFY4 516 aa12.94□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Gtf2a1Q99PM3 378 aa12.93□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Mex3cQ05A36 652 aaKnown RBP12.93□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Tomm22Q9CPQ3 142 aa12.93□□□□□ -0.34
Col6a3-201ENSMUST00000056925 HnrnpuQ8VEK3 800 aaKnown RBP12.92□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Trim55G3X8Y1 545 aa12.91□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Setd5Q5XJV7 1441 aa12.91□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Rassf8Q8CJ96 419 aa12.91□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Mfap1aC0HKD8 439 aaKnown RBP12.91□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Mfap1bC0HKD9 439 aaKnown RBP12.91□□□□□ -0.34
Col6a3-201ENSMUST00000056925 CgnP59242 1191 aa12.9□□□□□ -0.34
Col6a3-201ENSMUST00000056925 R3hcc1Q8BSI6 488 aa12.9□□□□□ -0.34
Col6a3-201ENSMUST00000056925 Znhit6Q3UFB2 460 aaKnown RBP12.89□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Fkbp15Q6P9Q6 1216 aaKnown RBP12.88□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Exosc9Q9JHI7 438 aaKnown RBP12.88□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Stard8Q8K031 1019 aa12.88□□□□□ -0.35
Col6a3-201ENSMUST00000056925 IqubQ8CDK3 788 aa12.88□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Paf1Q8K2T8 535 aa12.88□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Ylpm1Q9R0I7 1386 aaKnown RBP12.87□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Def6Q8C2K1 630 aa12.86□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Smarce1O54941 411 aaKnown RBP12.86□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Kif3aP28741 701 aa12.86□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Glipr1l2Q9CQ35 332 aa12.85□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Iffo2Q8R2V2 512 aa12.85□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Iqcf3Q9D498 203 aa12.85□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Sart3Q9JLI8 962 aaKnown RBP12.85□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Grwd1Q810D6 446 aaKnown RBP12.84□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Rbm10Q99KG3 930 aaKnown RBP12.84□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Chaf1aQ9QWF0 911 aa12.84□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Fhad1A6PWD2 1420 aa12.84□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Gps2Q921N8 327 aa12.84□□□□□ -0.35
Col6a3-201ENSMUST00000056925 Sf3a1Q8K4Z5 791 aaKnown RBP12.84□□□□□ -0.35
Col6a3-201ENSMUST00000056925 1700019A02RikA0A087WPV9 146 aa12.83□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Atp6v1dP57746 247 aa12.83□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Kdm2aP59997 1161 aa12.83□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Samd1D3YXK1 519 aa12.83□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Mia2Q91ZV0 1396 aa12.83□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Ccdc173A0JLY1 547 aa12.82□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Arid4aF8VPQ2 1261 aaKnown RBP12.82□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Pde3bQ61409 1100 aa12.82□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Rufy1Q8BIJ7 712 aa12.81□□□□□ -0.36
Col6a3-201ENSMUST00000056925 GorabQ8BRM2 368 aa12.81□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Dctn1O08788 1281 aa12.81□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Srpk2O54781 681 aaKnown RBP12.81□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Drc7Q6V3W6 876 aa12.8□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Dixdc1Q80Y83 711 aa12.8□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Tpd52l1O54818 204 aa12.8□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Eea1Q8BL66 1411 aa12.79□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Vgll3P85442 326 aa12.78□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Sycp1Q62209 993 aa12.78□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Tpm1P58771 284 aa12.78□□□□□ -0.36
Col6a3-201ENSMUST00000056925 EzrP26040 586 aaKnown RBP12.78□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Aebp1Q640N1 1128 aa12.77□□□□□ -0.36
Col6a3-201ENSMUST00000056925 CrebrfQ8CDG5 640 aaKnown RBP12.77□□□□□ -0.36
Col6a3-201ENSMUST00000056925 Utp3Q9JI13 469 aaKnown RBP12.77□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Zfp777B9EKF4 885 aa12.77□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Sparcl1P70663 650 aa12.77□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Gripap1Q8VD04 806 aa12.77□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Noc3lQ8VI84 807 aaKnown RBP12.76□□□□□ -0.37
Col6a3-201ENSMUST00000056925 CntlnA2AM05 1397 aa12.76□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Phf14Q9D4H9 881 aa12.76□□□□□ -0.37
Col6a3-201ENSMUST00000056925 DmtnQ9WV69 405 aa12.76□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Ccer1Q9CQL2 403 aa12.76□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Hmgn5Q9JL35 406 aa12.76□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Mroh3A0A1D5RM54 893 aa12.75□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Fam193aQ8CGI1 1231 aaKnown RBP12.75□□□□□ -0.37
Col6a3-201ENSMUST00000056925 St18Q80TY4 1045 aa12.74□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Kif4P33174 1231 aa12.73□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Mns1Q61884 491 aa12.73□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Abcc8B2RUS7 1588 aa12.73□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Gcom1E9PZ54 550 aa12.73□□□□□ -0.37
Col6a3-201ENSMUST00000056925 MyzapQ3UIJ9 466 aa12.73□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Mtus2Q3UHD3 1353 aa12.73□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Speer4f1Q9D5Q6 258 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms