RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Dnttip2Q8R2M2 758 aaKnown RBP11.19□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Aebp1Q640N1 1128 aa11.18□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Cul7Q8VE73 1689 aa11.18□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Urb2E9Q7L1 1524 aaKnown RBP11.17□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Gm13695A2AK44 830 aa11.17□□□□□ -0.62
Cdc40-201ENSMUST00000044166 A2mQ6GQT1 1474 aa11.17□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Ccdc9Q8VC31 543 aaKnown RBP11.16□□□□□ -0.62
Cdc40-201ENSMUST00000044166 DmtnQ9WV69 405 aa11.16□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Gm1043A0A140LJC2 1431 aa11.16□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Pprc1Q6NZN1 1644 aa11.16□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Slc4a2P13808 1237 aaKnown RBP11.16□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Pak3Q61036 559 aa11.15□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Liat1Q810M6 228 aa11.15□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Chic2Q9D9G3 165 aa11.15□□□□□ -0.62
Cdc40-201ENSMUST00000044166 NeflP08551 543 aa11.15□□□□□ -0.62
Cdc40-201ENSMUST00000044166 Tshz2Q68FE9 1030 aa11.14□□□□□ -0.63
Cdc40-201ENSMUST00000044166 P3h3Q8CG70 732 aa11.14□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Zfp91Q62511 572 aa11.14□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Wwc2Q6NXJ0 1187 aa11.14□□□□□ -0.63
Cdc40-201ENSMUST00000044166 DekQ7TNV0 380 aaKnown RBP11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Ncoa1P70365 1447 aa11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Fhod3Q76LL6 1578 aa11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Ercc6F8VPZ5 1481 aa11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Thoc2B1AZI6 1594 aaKnown RBP11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Dennd4bQ3U1Y4 1499 aa11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Unc13aQ4KUS2 1712 aa11.13□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Mphosph9A6H5Y1 991 aa11.12□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Exoc6Q8R313 802 aa11.12□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Ccnb3Q810T2 1396 aa11.11□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Samd1D3YXK1 519 aa11.11□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Anp32bQ9EST5 272 aaKnown RBP11.1□□□□□ -0.63
Cdc40-201ENSMUST00000044166 PnisrA2AJT4 805 aaKnown RBP11.1□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Npm1Q61937 292 aaKnown RBP11.1□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Polr1aO35134 1717 aaKnown RBP11.09□□□□□ -0.63
Cdc40-201ENSMUST00000044166 Egfem1Q8C088 590 aa11.09□□□□□ -0.63
Cdc40-201ENSMUST00000044166 AcrbpQ3V140 540 aa11.08□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Dnajc5P60904 198 aa11.08□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Ipo9Q91YE6 1041 aa11.07□□□□□ -0.64
Cdc40-201ENSMUST00000044166 LrpprcQ6PB66 1392 aaKnown RBP11.06□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Lmtk2Q3TYD6 1471 aa11.06□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Usp47Q8BY87 1376 aa11.06□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Tcerg1Q8CGF7 1100 aaKnown RBP11.06□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Zbtb7cQ8VCZ7 619 aa11.06□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Cux2P70298 1426 aa11.05□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Znf326O88291 580 aa11.05□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Ofd1Q80Z25 1017 aa11.05□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Duox2A2AQ99 1517 aa11.05□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Setbp1Q9Z180 1582 aa11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Pkd2O35245 966 aa11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Slc4a3P16283 1227 aa11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Plcd3Q8K2J0 785 aa11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 PogzQ8BZH4 1409 aaKnown RBP11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 SynmQ70IV5 1561 aa11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Ythdc1E9Q5K9 736 aaKnown RBP11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Chmp4bQ9D8B3 224 aaKnown RBP11.04□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Rprd2Q6NXI6 1469 aaKnown RBP11.03□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Rfx7F8VPJ6 1459 aa11.03□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Pdcl3Q8BVF2 240 aa11.02□□□□□ -0.64
Cdc40-201ENSMUST00000044166 Cwc22Q8C5N3 908 aaKnown RBP11.02□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Stard8Q8K031 1019 aa11.02□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Mug1P28665 1476 aa11.01□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Fkbp15Q6P9Q6 1216 aaKnown RBP11.01□□□□□ -0.65
Cdc40-201ENSMUST00000044166 EprsQ8CGC7 1512 aaKnown RBP11□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Plekhg5Q66T02 1073 aa11□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Q8BT18 775 aa11□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Cabp1Q9JLK7 227 aa10.99□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Kif27Q7M6Z4 1394 aa10.99□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Ift140E9PY46 1464 aa10.98□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Gcc2Q8CHG3 1679 aa10.98□□□□□ -0.65
Cdc40-201ENSMUST00000044166 L3mbtl2P59178 703 aa10.98□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Phldb1Q6PDH0 1371 aaKnown RBP10.97□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Disp1Q3TDN0 1521 aa10.96□□□□□ -0.65
Cdc40-201ENSMUST00000044166 Pik3c2gO70167 1506 aa10.96□□□□□ -0.66
Cdc40-201ENSMUST00000044166 NexmifQ5DTT1 1515 aa10.96□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Ubl4bQ9CQ84 188 aa10.95□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Samd9lQ69Z37 1561 aa10.95□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Zfp644E9QA22 1323 aa10.95□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Kif21aQ9QXL2 1672 aa10.95□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Kcnh8P59111 1102 aa10.95□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Gpatch8A2A6A1 1505 aa10.95□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Rad54l2Q99NG0 1466 aa10.94□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Arhgap27A2AB59 869 aa10.93□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Plekhh2Q8C115 1491 aa10.93□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Dapk1Q80YE7 1442 aa10.93□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Abcc5Q9R1X5 1436 aa10.92□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Gtf2a1Q99PM3 378 aa10.92□□□□□ -0.66
Cdc40-201ENSMUST00000044166 CadpsQ80TJ1 1355 aa10.92□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Rundc1Q0VDN7 615 aa10.92□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Ube2q2Q8K2Z8 378 aa10.92□□□□□ -0.66
Cdc40-201ENSMUST00000044166 BC005561E9Q5E2 1589 aa10.92□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Kiaa1211Q5PR69 1207 aa10.91□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Mink1Q9JM52 1308 aa10.91□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Rgl3Q3UYI5 709 aa10.91□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Fbxo3Q9DC63 480 aa10.91□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Kank1E9Q238 1360 aa10.9□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Myom3A2ABU4 1439 aa10.9□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Card11Q8CIS0 1159 aa10.9□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Iqcf3Q9D498 203 aa10.9□□□□□ -0.66
Cdc40-201ENSMUST00000044166 Lamc1P02468 1607 aaKnown RBP10.9□□□□□ -0.67
Cdc40-201ENSMUST00000044166 Abca5Q8K448 1642 aa10.9□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms