RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Nup155Q99P88 1391 aaKnown RBP14.15□□□□□ -0.14
Limch1-201ENSMUST00000038188 1700019A02RikA0A087WPV9 146 aa14.15□□□□□ -0.14
Limch1-201ENSMUST00000038188 Gtf2e1Q9D0D5 440 aa14.14□□□□□ -0.15
Limch1-201ENSMUST00000038188 CntlnA2AM05 1397 aa14.14□□□□□ -0.15
Limch1-201ENSMUST00000038188 Ddx54Q8K4L0 874 aaKnown RBP14.13□□□□□ -0.15
Limch1-201ENSMUST00000038188 Nop58Q6DFW4 536 aaKnown RBP14.13□□□□□ -0.15
Limch1-201ENSMUST00000038188 Spag9Q58A65 1321 aaKnown RBP14.13□□□□□ -0.15
Limch1-201ENSMUST00000038188 Sirt1Q923E4 737 aa14.13□□□□□ -0.15
Limch1-201ENSMUST00000038188 Birc3O08863 600 aa14.13□□□□□ -0.15
Limch1-201ENSMUST00000038188 Wdr62Q3U3T8 1523 aa14.13□□□□□ -0.15
Limch1-201ENSMUST00000038188 Plekhh2Q8C115 1491 aa14.12□□□□□ -0.15
Limch1-201ENSMUST00000038188 Mapk8ip3Q9ESN9 1337 aa14.11□□□□□ -0.15
Limch1-201ENSMUST00000038188 Iqcf3Q9D498 203 aa14.11□□□□□ -0.15
Limch1-201ENSMUST00000038188 Tdrd9Q14BI7 1383 aa14.1□□□□□ -0.15
Limch1-201ENSMUST00000038188 Efcab5A0JP43 1406 aa14.1□□□□□ -0.15
Limch1-201ENSMUST00000038188 Ccnb3Q810T2 1396 aa14.1□□□□□ -0.15
Limch1-201ENSMUST00000038188 Crocc2F6XLV1 1638 aa14.08□□□□□ -0.15
Limch1-201ENSMUST00000038188 Znf326O88291 580 aa14.08□□□□□ -0.16
Limch1-201ENSMUST00000038188 Zfp777B9EKF4 885 aa14.08□□□□□ -0.16
Limch1-201ENSMUST00000038188 PogzQ8BZH4 1409 aaKnown RBP14.07□□□□□ -0.16
Limch1-201ENSMUST00000038188 Mia2Q91ZV0 1396 aa14.07□□□□□ -0.16
Limch1-201ENSMUST00000038188 Fan1Q69ZT1 1020 aa14.07□□□□□ -0.16
Limch1-201ENSMUST00000038188 Pkd2O35245 966 aa14.07□□□□□ -0.16
Limch1-201ENSMUST00000038188 Fyb1O35601 819 aa14.07□□□□□ -0.16
Limch1-201ENSMUST00000038188 Arhgap5P97393 1501 aa14.06□□□□□ -0.16
Limch1-201ENSMUST00000038188 Gm156Q58A37 223 aa14.06□□□□□ -0.16
Limch1-201ENSMUST00000038188 Rapgef2Q8CHG7 1496 aa14.05□□□□□ -0.16
Limch1-201ENSMUST00000038188 Arhgap31A6X8Z5 1425 aa14.05□□□□□ -0.16
Limch1-201ENSMUST00000038188 Eif4g2Q62448 906 aaKnown RBP14.04□□□□□ -0.16
Limch1-201ENSMUST00000038188 GphnQ8BUV3 769 aaKnown RBP14.03□□□□□ -0.16
Limch1-201ENSMUST00000038188 Clstn1Q9EPL2 979 aa14.03□□□□□ -0.16
Limch1-201ENSMUST00000038188 Rtf1A2AQ19 715 aaKnown RBP14.02□□□□□ -0.16
Limch1-201ENSMUST00000038188 Neo1P97798 1493 aa14.02□□□□□ -0.16
Limch1-201ENSMUST00000038188 Cabp4Q8VHC5 271 aa14.02□□□□□ -0.17
Limch1-201ENSMUST00000038188 Slc5a4bQ91ZP4 660 aa14.02□□□□□ -0.17
Limch1-201ENSMUST00000038188 Map3k5O35099 1380 aa14.01□□□□□ -0.17
Limch1-201ENSMUST00000038188 Tnnt1O88346 262 aa14.01□□□□□ -0.17
Limch1-201ENSMUST00000038188 Vsig10D3YX43 558 aa13.99□□□□□ -0.17
Limch1-201ENSMUST00000038188 Gm6268A2A3U9 297 aa13.98□□□□□ -0.17
Limch1-201ENSMUST00000038188 Mink1Q9JM52 1308 aa13.98□□□□□ -0.17
Limch1-201ENSMUST00000038188 Ccdc141E9Q8Q6 1531 aa13.98□□□□□ -0.17
Limch1-201ENSMUST00000038188 Gm7298A0A0N4SVU1 1476 aa13.97□□□□□ -0.17
Limch1-201ENSMUST00000038188 Top2aQ01320 1528 aaKnown RBP13.97□□□□□ -0.17
Limch1-201ENSMUST00000038188 Kcnn1Q9EQR3 537 aa13.96□□□□□ -0.17
Limch1-201ENSMUST00000038188 Mphosph9A6H5Y1 991 aa13.96□□□□□ -0.18
Limch1-201ENSMUST00000038188 CenpjQ569L8 1344 aa13.95□□□□□ -0.18
Limch1-201ENSMUST00000038188 Csrnp3P59055 597 aa13.95□□□□□ -0.18
Limch1-201ENSMUST00000038188 Q9D9H8 365 aa13.95□□□□□ -0.18
Limch1-201ENSMUST00000038188 Polr1aO35134 1717 aaKnown RBP13.94□□□□□ -0.18
Limch1-201ENSMUST00000038188 Gm21190A0A0G2JGJ6 266 aa13.94□□□□□ -0.18
Limch1-201ENSMUST00000038188 Neurod2Q62414 383 aa13.94□□□□□ -0.18
Limch1-201ENSMUST00000038188 Arhgap35Q91YM2 1499 aa13.94□□□□□ -0.18
Limch1-201ENSMUST00000038188 Igf1rQ60751 1373 aa13.94□□□□□ -0.18
Limch1-201ENSMUST00000038188 Grin2bQ01097 1482 aa13.93□□□□□ -0.18
Limch1-201ENSMUST00000038188 Rundc1Q0VDN7 615 aa13.93□□□□□ -0.18
Limch1-201ENSMUST00000038188 Mrs2Q5NCE8 434 aa13.93□□□□□ -0.18
Limch1-201ENSMUST00000038188 ArxO35085 564 aa13.93□□□□□ -0.18
Limch1-201ENSMUST00000038188 ClspnQ80YR7 1315 aa13.93□□□□□ -0.18
Limch1-201ENSMUST00000038188 Tnnt3Q9QZ47 272 aa13.92□□□□□ -0.18
Limch1-201ENSMUST00000038188 U2surpQ6NV83 1029 aaKnown RBP13.91□□□□□ -0.18
Limch1-201ENSMUST00000038188 ErbinQ80TH2 1402 aa13.9□□□□□ -0.18
Limch1-201ENSMUST00000038188 Cwc22Q8C5N3 908 aaKnown RBP13.9□□□□□ -0.18
Limch1-201ENSMUST00000038188 Hspa5P20029 655 aaKnown RBP13.89□□□□□ -0.19
Limch1-201ENSMUST00000038188 Zpr1Q62384 459 aa13.89□□□□□ -0.19
Limch1-201ENSMUST00000038188 Gimap5Q8BWF2 308 aa13.89□□□□□ -0.19
Limch1-201ENSMUST00000038188 Nol10Q5RJG1 687 aaKnown RBP13.88□□□□□ -0.19
Limch1-201ENSMUST00000038188 Fhad1A6PWD2 1420 aa13.88□□□□□ -0.19
Limch1-201ENSMUST00000038188 Senp3Q9EP97 568 aaKnown RBP13.88□□□□□ -0.19
Limch1-201ENSMUST00000038188 TchhA0A0B4J1F9 1599 aa13.87□□□□□ -0.19
Limch1-201ENSMUST00000038188 Tom1O88746 492 aa13.87□□□□□ -0.19
Limch1-201ENSMUST00000038188 A2mQ6GQT1 1474 aa13.86□□□□□ -0.19
Limch1-201ENSMUST00000038188 Srcin1Q9QWI6 1250 aa13.86□□□□□ -0.19
Limch1-201ENSMUST00000038188 Ythdc2B2RR83 1445 aaKnown RBP13.86□□□□□ -0.19
Limch1-201ENSMUST00000038188 Top2bQ64511 1612 aa13.86□□□□□ -0.19
Limch1-201ENSMUST00000038188 Egfem1Q8C088 590 aa13.85□□□□□ -0.19
Limch1-201ENSMUST00000038188 Pde4cQ3UEI1 686 aa13.85□□□□□ -0.19
Limch1-201ENSMUST00000038188 Gapvd1Q6PAR5 1458 aa13.85□□□□□ -0.19
Limch1-201ENSMUST00000038188 Rock2P70336 1388 aa13.84□□□□□ -0.19
Limch1-201ENSMUST00000038188 Prdm16A2A935 1275 aa13.84□□□□□ -0.19
Limch1-201ENSMUST00000038188 Dcaf11Q91VU6 549 aa13.84□□□□□ -0.19
Limch1-201ENSMUST00000038188 ArsiQ32KI9 573 aa13.84□□□□□ -0.19
Limch1-201ENSMUST00000038188 Q3TQI7 289 aaKnown RBP13.83□□□□□ -0.2
Limch1-201ENSMUST00000038188 Usp40Q8BWR4 1235 aa13.83□□□□□ -0.2
Limch1-201ENSMUST00000038188 EprsQ8CGC7 1512 aaKnown RBP13.83□□□□□ -0.2
Limch1-201ENSMUST00000038188 Gm21698A0A087WQP8 267 aa13.81□□□□□ -0.2
Limch1-201ENSMUST00000038188 Gm21671G3UY31 267 aa13.81□□□□□ -0.2
Limch1-201ENSMUST00000038188 Acsbg1Q99PU5 721 aa13.81□□□□□ -0.2
Limch1-201ENSMUST00000038188 Grin2aP35436 1464 aa13.8□□□□□ -0.2
Limch1-201ENSMUST00000038188 Kdm2bQ6P1G2 1309 aa13.8□□□□□ -0.2
Limch1-201ENSMUST00000038188 Pibf1E9Q6K3 756 aa13.79□□□□□ -0.2
Limch1-201ENSMUST00000038188 U2af1Q9D883 239 aaKnown RBP13.79□□□□□ -0.2
Limch1-201ENSMUST00000038188 Apbb1Q9QXJ1 710 aa13.79□□□□□ -0.2
Limch1-201ENSMUST00000038188 Tmf1B9EKI3 1091 aa13.79□□□□□ -0.2
Limch1-201ENSMUST00000038188 NrkQ9R0G8 1455 aa13.78□□□□□ -0.2
Limch1-201ENSMUST00000038188 Camsap1A2AHC3 1581 aa13.78□□□□□ -0.2
Limch1-201ENSMUST00000038188 Chmp7Q8R1T1 451 aa13.78□□□□□ -0.2
Limch1-201ENSMUST00000038188 Lamc3Q9R0B6 1581 aa13.78□□□□□ -0.2
Limch1-201ENSMUST00000038188 NudcO35685 332 aaKnown RBP13.78□□□□□ -0.2
Limch1-201ENSMUST00000038188 Supt5hO55201 1082 aaKnown RBP13.77□□□□□ -0.2
Limch1-201ENSMUST00000038188 TatQ8QZR1 454 aa13.77□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms