RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Irx6Q9ER75 438 aa23.66■■□□□ 1.38
Ebf3-201ENSMUST00000033378 Cecr2E9Q2Z1 1453 aa23.64■■□□□ 1.38
Ebf3-201ENSMUST00000033378 Stag3O70576 1240 aa23.62■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Ifit1bl1D3Z6F0 470 aa23.61■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Fhad1A6PWD2 1420 aa23.6■■□□□ 1.37
Ebf3-201ENSMUST00000033378 NudcO35685 332 aaKnown RBP23.6■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Chmp4bQ9D8B3 224 aaKnown RBP23.59■■□□□ 1.37
Ebf3-201ENSMUST00000033378 KnstrnQ9D9Z1 312 aaKnown RBP23.59■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Crybg2B7ZCC2 1516 aa23.59■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Tmf1B9EKI3 1091 aa23.58■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Ipo8Q7TMY7 1010 aa23.58■■□□□ 1.37
Ebf3-201ENSMUST00000033378 Smarca2Q6DIC0 1577 aa23.55■■□□□ 1.36
Ebf3-201ENSMUST00000033378 CrbnQ8C7D2 445 aa23.54■■□□□ 1.36
Ebf3-201ENSMUST00000033378 1700019A02RikA0A087WPV9 146 aa23.54■■□□□ 1.36
Ebf3-201ENSMUST00000033378 Gtf3c3Q3TMP1 882 aa23.54■■□□□ 1.36
Ebf3-201ENSMUST00000033378 Znf710Q3U288 666 aa23.52■■□□□ 1.36
Ebf3-201ENSMUST00000033378 Casc1Q6TDU8 730 aa23.51■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Cluap1Q8R3P7 413 aa23.51■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Erich6bQ9D4S6 220 aa23.5■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Golga2Q921M4 999 aa23.49■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Sycp2Q9CUU3 1500 aa23.48■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Synj1Q8CHC4 1574 aa23.46■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Gtf2e1Q9D0D5 440 aa23.46■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Dcaf11Q91VU6 549 aa23.46■■□□□ 1.35
Ebf3-201ENSMUST00000033378 Hsp90b1P08113 802 aaKnown RBP23.44■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Mfap1aC0HKD8 439 aaKnown RBP23.43■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Mfap1bC0HKD9 439 aaKnown RBP23.43■■□□□ 1.34
Ebf3-201ENSMUST00000033378 U2af1Q9D883 239 aaKnown RBP23.43■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Rpap1Q80TE0 1409 aa23.42■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Usp47Q8BY87 1376 aa23.42■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Tmco5bQ80X59 307 aa23.4■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Iqcf3Q9D498 203 aa23.4■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Ccnb3Q810T2 1396 aa23.4■■□□□ 1.34
Ebf3-201ENSMUST00000033378 PrkcshO08795 521 aa23.39■■□□□ 1.34
Ebf3-201ENSMUST00000033378 Rock2P70336 1388 aa23.39■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Ecm2Q5FW85 670 aa23.39■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Safb2Q80YR5 991 aaKnown RBP23.38■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Srcin1Q9QWI6 1250 aa23.38■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Carmil1Q6EDY6 1374 aa23.37■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Slc4a1apE9PX68 744 aa23.37■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Znf330Q922H9 316 aa23.37■■□□□ 1.33
Ebf3-201ENSMUST00000033378 HnrnpuQ8VEK3 800 aaKnown RBP23.36■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Nup155Q99P88 1391 aaKnown RBP23.35■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Pds5bQ4VA53 1446 aaKnown RBP23.35■■□□□ 1.33
Ebf3-201ENSMUST00000033378 Pank3Q8R2W9 370 aa23.32■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Ksr2Q3UVC0 959 aa23.32■■□□□ 1.32
Ebf3-201ENSMUST00000033378 U2surpQ6NV83 1029 aaKnown RBP23.31■■□□□ 1.32
Ebf3-201ENSMUST00000033378 NgefQ8CHT1 710 aa23.31■■□□□ 1.32
Ebf3-201ENSMUST00000033378 UacaQ8CGB3 1411 aa23.31■■□□□ 1.32
Ebf3-201ENSMUST00000033378 GorabQ8BRM2 368 aa23.3■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Sart3Q9JLI8 962 aaKnown RBP23.3■■□□□ 1.32
Ebf3-201ENSMUST00000033378 MccE9PWI3 1003 aa23.3■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Plekhh2Q8C115 1491 aa23.29■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Adam1bQ8R534 806 aa23.28■■□□□ 1.32
Ebf3-201ENSMUST00000033378 SlkO54988 1233 aa23.27■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Rrp12Q6P5B0 1295 aaKnown RBP23.27■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Plin1Q8CGN5 517 aa23.27■■□□□ 1.32
Ebf3-201ENSMUST00000033378 PtmsQ9D0J8 101 aaKnown RBP23.27■■□□□ 1.32
Ebf3-201ENSMUST00000033378 Inpp5dQ9ES52 1191 aa23.26■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Mre11Q61216 706 aa23.26■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Stk26Q99JT2 416 aa23.26■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Taok2Q6ZQ29 1240 aa23.25■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Pak3Q61036 559 aa23.24■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Tnnt2P50752 301 aa23.24■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Pcmtd1P59913 357 aa23.23■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Esx1O88933 382 aa23.22■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Cux2P70298 1426 aa23.22■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Pes1Q9EQ61 584 aaKnown RBP23.21■■□□□ 1.31
Ebf3-201ENSMUST00000033378 Ccar1Q8CH18 1146 aaKnown RBP23.21■■□□□ 1.31
Ebf3-201ENSMUST00000033378 MsnP26041 577 aaKnown RBP23.2■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Rock1P70335 1354 aa23.19■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Eif2s2Q99L45 331 aaKnown RBP23.19■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Senp3Q9EP97 568 aaKnown RBP23.19■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Zfp777B9EKF4 885 aa23.18■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Ankrd36D3Z4K0 1415 aa23.18■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Dapk1Q80YE7 1442 aa23.17■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Slc4a2P13808 1237 aaKnown RBP23.17■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Ak7Q9D2H2 614 aa23.16■■□□□ 1.3
Ebf3-201ENSMUST00000033378 4933402E13RikQ9D4D2 429 aa23.16■■□□□ 1.3
Ebf3-201ENSMUST00000033378 Birc3O08863 600 aa23.14■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Rpgrip1lQ8CG73 1264 aa23.14■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Ddrgk1Q80WW9 315 aa23.14■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Rtn4Q99P72 1162 aaKnown RBP23.13■■□□□ 1.29
Ebf3-201ENSMUST00000033378 PnnO35691 725 aaKnown RBP23.11■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Fan1Q69ZT1 1020 aa23.11■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Prkrip1Q9CWV6 186 aaKnown RBP23.11■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Rtf1A2AQ19 715 aaKnown RBP23.11■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Ylpm1Q9R0I7 1386 aaKnown RBP23.09■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Dhx57Q6P5D3 1388 aaKnown RBP23.08■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Ttll13A4Q9F6 804 aa23.08■■□□□ 1.29
Ebf3-201ENSMUST00000033378 Sart1Q9Z315 806 aaKnown RBP23.08■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Arid3cA6PWV5 409 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Rsph3aQ3UFY4 516 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Zscan10Q3URR7 782 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Kif3bQ61771 747 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 ScribQ80U72 1612 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Tsen2Q6P7W5 460 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Fam184bQ0KK56 942 aa23.07■■□□□ 1.28
Ebf3-201ENSMUST00000033378 PnisrA2AJT4 805 aaKnown RBP23.06■■□□□ 1.28
Ebf3-201ENSMUST00000033378 Washc2Q6PGL7 1334 aa23.06■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms