RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C URB2P47108 1174 aa2.22□□□□□ -2.05
SWT1YOR166C SAM50P53969 484 aa2.22□□□□□ -2.05
SWT1YOR166C YPL014WQ02606 381 aa2.22□□□□□ -2.05
SWT1YOR166C GIR2Q03768 265 aaPredicted RBP2.22□□□□□ -2.05
SWT1YOR166C FIN1Q03898 291 aa2.22□□□□□ -2.05
SWT1YOR166C SPC19Q03954 165 aa2.22□□□□□ -2.05
SWT1YOR166C IVY1Q04934 453 aa2.22□□□□□ -2.05
SWT1YOR166C THP1Q08231 455 aa2.22□□□□□ -2.05
SWT1YOR166C YDR056CQ12025 205 aa2.22□□□□□ -2.05
SWT1YOR166C NMD4Q12129 218 aa2.22□□□□□ -2.05
SWT1YOR166C ATG9Q12142 997 aa2.22□□□□□ -2.05
SWT1YOR166C LSP1Q12230 341 aaKnown RBP2.22□□□□□ -2.05
SWT1YOR166C GAL80P04387 435 aa2.21□□□□□ -2.06
SWT1YOR166C PUP3P25451 205 aaKnown RBP2.21□□□□□ -2.06
SWT1YOR166C ACH1P32316 526 aa2.21□□□□□ -2.06
SWT1YOR166C GEX2P36173 615 aa2.21□□□□□ -2.06
SWT1YOR166C BNA4P38169 460 aa2.21□□□□□ -2.06
SWT1YOR166C CSM2P40465 213 aa2.21□□□□□ -2.06
SWT1YOR166C DSD1P53095 428 aa2.21□□□□□ -2.06
SWT1YOR166C NUP100Q02629 959 aa2.21□□□□□ -2.06
SWT1YOR166C IRC15Q02733 499 aa2.21□□□□□ -2.06
SWT1YOR166C TFC6Q06339 672 aa2.21□□□□□ -2.06
SWT1YOR166C HSH49Q99181 213 aaPredicted RBP2.21□□□□□ -2.06
SWT1YOR166C YPT6Q99260 215 aa2.21□□□□□ -2.06
SWT1YOR166C CLB3P24870 427 aa2.2□□□□□ -2.06
SWT1YOR166C CRM1P30822 1084 aaKnown RBP2.2□□□□□ -2.06
SWT1YOR166C ERP2P39704 215 aa2.2□□□□□ -2.06
SWT1YOR166C GUF1P46943 645 aa2.2□□□□□ -2.06
SWT1YOR166C YJL132WP47014 750 aa2.2□□□□□ -2.06
SWT1YOR166C RMD9P53140 646 aaKnown RBP2.2□□□□□ -2.06
SWT1YOR166C MNP1P53163 194 aaPredicted RBP2.2□□□□□ -2.06
SWT1YOR166C GPI1P53306 609 aa2.2□□□□□ -2.06
SWT1YOR166C BUD21Q08492 214 aaPredicted RBP2.2□□□□□ -2.06
SWT1YOR166C MUM3Q08750 479 aa2.2□□□□□ -2.06
SWT1YOR166C PDH1Q12428 516 aaKnown RBP2.2□□□□□ -2.06
SWT1YOR166C LEU4P06208 619 aaKnown RBP2.19□□□□□ -2.06
SWT1YOR166C APE1P14904 514 aa2.19□□□□□ -2.06
SWT1YOR166C CLC1P17891 233 aa2.19□□□□□ -2.06
SWT1YOR166C FUR1P18562 216 aaKnown RBP2.19□□□□□ -2.06
SWT1YOR166C NDC1P32500 655 aa2.19□□□□□ -2.06
SWT1YOR166C NUP133P36161 1157 aa2.19□□□□□ -2.06
SWT1YOR166C IMD4P50094 524 aaKnown RBP2.19□□□□□ -2.06
SWT1YOR166C CAF130P53280 1122 aaPredicted RBP2.19□□□□□ -2.06
SWT1YOR166C DSL1P53847 754 aa2.19□□□□□ -2.06
SWT1YOR166C RHO4Q00246 291 aa2.19□□□□□ -2.06
SWT1YOR166C HCR1Q05775 265 aaKnown RBP2.19□□□□□ -2.06
SWT1YOR166C MRPL51Q06090 140 aaPredicted RBP2.19□□□□□ -2.06
SWT1YOR166C SFI1Q12369 946 aa2.19□□□□□ -2.06
SWT1YOR166C SET6Q12529 373 aa2.19□□□□□ -2.06
SWT1YOR166C YAR066WP0CX18 203 aa2.18□□□□□ -2.06
SWT1YOR166C YHR214WP0CX19 203 aa2.18□□□□□ -2.06
SWT1YOR166C RPL19AP0CX82 189 aaKnown RBP2.18□□□□□ -2.06
SWT1YOR166C RPL19BP0CX83 189 aaPredicted RBP2.18□□□□□ -2.06
SWT1YOR166C AFG1P32317 509 aa2.18□□□□□ -2.06
SWT1YOR166C IMP2'P32351 346 aa2.18□□□□□ -2.06
SWT1YOR166C ECM15P35195 104 aa2.18□□□□□ -2.06
SWT1YOR166C CMC1P36064 111 aa2.18□□□□□ -2.06
SWT1YOR166C TCD2P36101 447 aaKnown RBP2.18□□□□□ -2.06
SWT1YOR166C OSH3P38713 996 aaKnown RBP2.18□□□□□ -2.06
SWT1YOR166C YJR154WP47181 346 aa2.18□□□□□ -2.06
SWT1YOR166C YDL186WP48568 277 aa2.18□□□□□ -2.06
SWT1YOR166C PYK2P52489 506 aaKnown RBP2.18□□□□□ -2.06
SWT1YOR166C TWF1P53250 332 aa2.18□□□□□ -2.06
SWT1YOR166C ZPR1P53303 486 aaKnown RBP2.18□□□□□ -2.06
SWT1YOR166C MRPL19P53875 158 aa2.18□□□□□ -2.06
SWT1YOR166C ALF1P53904 254 aa2.18□□□□□ -2.06
SWT1YOR166C PDS5Q04264 1277 aa2.18□□□□□ -2.06
SWT1YOR166C COG4Q06096 861 aa2.18□□□□□ -2.06
SWT1YOR166C REX4Q08237 289 aa2.18□□□□□ -2.06
SWT1YOR166C ATG29Q12092 213 aa2.18□□□□□ -2.06
SWT1YOR166C RTP1Q12751 981 aa2.18□□□□□ -2.06
SWT1YOR166C RHO2P06781 192 aa2.17□□□□□ -2.06
SWT1YOR166C RAD14P28519 371 aa2.17□□□□□ -2.06
SWT1YOR166C UTR4P32626 227 aa2.17□□□□□ -2.06
SWT1YOR166C GYP6P32806 458 aa2.17□□□□□ -2.06
SWT1YOR166C HCS1P34243 683 aa2.17□□□□□ -2.06
SWT1YOR166C VID24P38263 362 aa2.17□□□□□ -2.06
SWT1YOR166C NTC20P38302 140 aaPredicted RBP2.17□□□□□ -2.06
SWT1YOR166C YHR210CP38893 341 aa2.17□□□□□ -2.06
SWT1YOR166C SHO1P40073 367 aa2.17□□□□□ -2.06
SWT1YOR166C SSN8P47821 323 aa2.17□□□□□ -2.06
SWT1YOR166C SRB7P47822 140 aa2.17□□□□□ -2.06
SWT1YOR166C MRX6P48564 524 aa2.17□□□□□ -2.06
SWT1YOR166C LYS4P49367 693 aaPredicted RBP2.17□□□□□ -2.06
SWT1YOR166C OCA1P50946 238 aaPredicted RBP2.17□□□□□ -2.06
SWT1YOR166C YGL242CP53066 181 aa2.17□□□□□ -2.06
SWT1YOR166C PKP2P53170 491 aa2.17□□□□□ -2.06
SWT1YOR166C NCS2P53923 493 aaPredicted RBP2.17□□□□□ -2.06
SWT1YOR166C HEL2Q05580 639 aaKnown RBP2.17□□□□□ -2.06
SWT1YOR166C VTA1Q06263 330 aa2.17□□□□□ -2.06
SWT1YOR166C YDL009CQ12210 107 aa2.17□□□□□ -2.06
SWT1YOR166C RLM1Q12224 676 aa2.17□□□□□ -2.06
SWT1YOR166C HSP42Q12329 375 aa2.17□□□□□ -2.06
SWT1YOR166C SEC39Q12745 709 aa2.17□□□□□ -2.06
SWT1YOR166C SPS4P09937 338 aa2.16□□□□□ -2.06
SWT1YOR166C RPL20AP0CX23 172 aaKnown RBP2.16□□□□□ -2.06
SWT1YOR166C RPL20BP0CX24 172 aaPredicted RBP2.16□□□□□ -2.06
SWT1YOR166C IDH2P28241 369 aaKnown RBP2.16□□□□□ -2.06
SWT1YOR166C TUL1P36096 758 aa2.16□□□□□ -2.06
SWT1YOR166C ALG8P40351 577 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms