RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C RRP7P25368 297 aaPredicted RBP2.28□□□□□ -2.04
VTI1YMR197C YCR051WP25631 222 aa2.28□□□□□ -2.04
VTI1YMR197C ERG1P32476 496 aaKnown RBP2.28□□□□□ -2.04
VTI1YMR197C SMI1P32566 505 aa2.28□□□□□ -2.04
VTI1YMR197C TIF3P34167 436 aaKnown RBP2.28□□□□□ -2.04
VTI1YMR197C SWH1P35845 1188 aa2.28□□□□□ -2.04
VTI1YMR197C MRPL4P36517 319 aa2.28□□□□□ -2.04
VTI1YMR197C RRF1P38771 230 aa2.28□□□□□ -2.04
VTI1YMR197C ECM10P39987 644 aa2.28□□□□□ -2.04
VTI1YMR197C SLZ1P40167 298 aa2.28□□□□□ -2.04
VTI1YMR197C RGI2P40188 164 aa2.28□□□□□ -2.04
VTI1YMR197C YFR020WP43600 232 aa2.28□□□□□ -2.04
VTI1YMR197C GUF1P46943 645 aa2.28□□□□□ -2.04
VTI1YMR197C YGR066CP53242 292 aa2.28□□□□□ -2.04
VTI1YMR197C NUP100Q02629 959 aa2.28□□□□□ -2.04
VTI1YMR197C ADD37Q03233 198 aa2.28□□□□□ -2.04
VTI1YMR197C RIX7Q07844 837 aaKnown RBP2.28□□□□□ -2.04
VTI1YMR197C TCO89Q08921 799 aa2.28□□□□□ -2.04
VTI1YMR197C REX3Q12090 404 aa2.28□□□□□ -2.04
VTI1YMR197C YLL056CQ12177 298 aa2.28□□□□□ -2.04
VTI1YMR197C FRE6Q12473 712 aa2.28□□□□□ -2.04
VTI1YMR197C YOL159C-AQ3E769 90 aa2.28□□□□□ -2.04
VTI1YMR197C RPC40P07703 335 aaKnown RBP2.27□□□□□ -2.05
VTI1YMR197C DFR1P07807 211 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VTI1YMR197C APE1P14904 514 aa2.27□□□□□ -2.05
VTI1YMR197C KAR3P17119 729 aa2.27□□□□□ -2.05
VTI1YMR197C POL4P25615 582 aa2.27□□□□□ -2.05
VTI1YMR197C PAP1P29468 568 aaKnown RBP2.27□□□□□ -2.05
VTI1YMR197C UIP5P36137 443 aa2.27□□□□□ -2.05
VTI1YMR197C MAL33P38157 468 aa2.27□□□□□ -2.05
VTI1YMR197C VID24P38263 362 aa2.27□□□□□ -2.05
VTI1YMR197C OTU2P38747 307 aaKnown RBP2.27□□□□□ -2.05
VTI1YMR197C YEL057CP39983 233 aa2.27□□□□□ -2.05
VTI1YMR197C PCL7P40186 285 aa2.27□□□□□ -2.05
VTI1YMR197C YIL060WP40519 144 aa2.27□□□□□ -2.05
VTI1YMR197C DOT5P40553 215 aa2.27□□□□□ -2.05
VTI1YMR197C MET28P40573 187 aa2.27□□□□□ -2.05
VTI1YMR197C MKT1P40850 830 aaKnown RBP2.27□□□□□ -2.05
VTI1YMR197C SPG5P42933 373 aa2.27□□□□□ -2.05
VTI1YMR197C SWP82P43554 623 aa2.27□□□□□ -2.05
VTI1YMR197C MDE1P47095 244 aa2.27□□□□□ -2.05
VTI1YMR197C BOR1P53838 576 aa2.27□□□□□ -2.05
VTI1YMR197C ADA2Q02336 434 aa2.27□□□□□ -2.05
VTI1YMR197C YPL107WQ02873 248 aa2.27□□□□□ -2.05
VTI1YMR197C MUB1Q03162 620 aa2.27□□□□□ -2.05
VTI1YMR197C RSM28Q03430 361 aa2.27□□□□□ -2.05
VTI1YMR197C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VTI1YMR197C APL4Q12028 832 aa2.27□□□□□ -2.05
VTI1YMR197C YJR112W-AQ3E743 109 aa2.27□□□□□ -2.05
VTI1YMR197C VCX1Q99385 411 aa2.27□□□□□ -2.05
VTI1YMR197C CPR2P23285 205 aa2.26□□□□□ -2.05
VTI1YMR197C SPB1P25582 841 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C CDC15P27636 974 aa2.26□□□□□ -2.05
VTI1YMR197C MSP1P28737 362 aa2.26□□□□□ -2.05
VTI1YMR197C TFB1P32776 642 aa2.26□□□□□ -2.05
VTI1YMR197C LOS1P33418 1100 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C AUR1P36107 401 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C LAS1P36146 502 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C CST26P38226 397 aa2.26□□□□□ -2.05
VTI1YMR197C PHO90P39535 881 aa2.26□□□□□ -2.05
VTI1YMR197C AFG3P39925 761 aa2.26□□□□□ -2.05
VTI1YMR197C YER130CP39959 443 aa2.26□□□□□ -2.05
VTI1YMR197C YDL186WP48568 277 aa2.26□□□□□ -2.05
VTI1YMR197C LCL3P53153 274 aa2.26□□□□□ -2.05
VTI1YMR197C PKP2P53170 491 aa2.26□□□□□ -2.05
VTI1YMR197C HST1P53685 503 aa2.26□□□□□ -2.05
VTI1YMR197C BNI5P53890 448 aaKnown RBP2.26□□□□□ -2.05
VTI1YMR197C INN1P53901 409 aa2.26□□□□□ -2.05
VTI1YMR197C HOT1Q03213 719 aa2.26□□□□□ -2.05
VTI1YMR197C YML037CQ03703 340 aa2.26□□□□□ -2.05
VTI1YMR197C YMR111CQ04461 462 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C DPB4Q04603 196 aaKnown RBP2.26□□□□□ -2.05
VTI1YMR197C LUC7Q07508 261 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C FMP45Q07651 309 aa2.26□□□□□ -2.05
VTI1YMR197C YEH1Q07804 573 aa2.26□□□□□ -2.05
VTI1YMR197C KEL3Q08979 651 aaPredicted RBP2.26□□□□□ -2.05
VTI1YMR197C ATG29Q12092 213 aa2.26□□□□□ -2.05
VTI1YMR197C GPM3Q12326 303 aa2.26□□□□□ -2.05
VTI1YMR197C SKS1Q12505 502 aa2.26□□□□□ -2.05
VTI1YMR197C AFI1Q99222 893 aa2.26□□□□□ -2.05
VTI1YMR197C YBR085C-AO43137 85 aa2.25□□□□□ -2.05
VTI1YMR197C GDH1P07262 454 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C LDB16P25587 256 aa2.25□□□□□ -2.05
VTI1YMR197C YIH1P25637 258 aa2.25□□□□□ -2.05
VTI1YMR197C POT1P27796 417 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
VTI1YMR197C GAC1P28006 793 aa2.25□□□□□ -2.05
VTI1YMR197C URA7P28274 579 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C MCM4P30665 933 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C SPC34P36131 295 aa2.25□□□□□ -2.05
VTI1YMR197C AGP2P38090 596 aa2.25□□□□□ -2.05
VTI1YMR197C RRP3P38712 501 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C YHR054CP38780 354 aa2.25□□□□□ -2.05
VTI1YMR197C RTT105P40063 208 aa2.25□□□□□ -2.05
VTI1YMR197C EFM4P40516 257 aa2.25□□□□□ -2.05
VTI1YMR197C IME4P41833 600 aa2.25□□□□□ -2.05
VTI1YMR197C YPI1P43587 155 aa2.25□□□□□ -2.05
VTI1YMR197C TCB2P48231 1178 aa2.25□□□□□ -2.05
VTI1YMR197C VID30P53076 958 aa2.25□□□□□ -2.05
VTI1YMR197C TOF1P53840 1238 aa2.25□□□□□ -2.05
VTI1YMR197C TDA7P53882 636 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms