RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W TRS23Q03784 219 aa2.38□□□□□ -2.03
SNU114YKL173W YML053CQ04978 212 aa2.38□□□□□ -2.03
SNU114YKL173W YPL216WQ08964 1102 aa2.38□□□□□ -2.03
SNU114YKL173W ZPS1Q12512 249 aa2.38□□□□□ -2.03
SNU114YKL173W PDA1P16387 420 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W GSY2P27472 705 aa2.38□□□□□ -2.03
SNU114YKL173W IDH2P28241 369 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W ARC19P33204 171 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W NUP133P36161 1157 aa2.38□□□□□ -2.03
SNU114YKL173W BFR1P38934 470 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SNU114YKL173W CDC1P40986 491 aa2.38□□□□□ -2.03
SNU114YKL173W STB2P46679 850 aa2.38□□□□□ -2.03
SNU114YKL173W BOP3P53958 396 aa2.38□□□□□ -2.03
SNU114YKL173W MFM1Q02783 413 aa2.38□□□□□ -2.03
SNU114YKL173W YMR160WQ03823 816 aa2.38□□□□□ -2.03
SNU114YKL173W FIN1Q03898 291 aa2.38□□□□□ -2.03
SNU114YKL173W SEG1Q04279 960 aa2.38□□□□□ -2.03
SNU114YKL173W FRE7Q12333 620 aa2.38□□□□□ -2.03
SNU114YKL173W TRX1P22217 103 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W YBR144CP34215 104 aa2.37□□□□□ -2.03
SNU114YKL173W APE3P37302 537 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W SEC31P38968 1273 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W PHM8P40025 321 aa2.37□□□□□ -2.03
SNU114YKL173W OPT1P40897 799 aa2.37□□□□□ -2.03
SNU114YKL173W HXT14P42833 540 aa2.37□□□□□ -2.03
SNU114YKL173W IRC8P47046 822 aa2.37□□□□□ -2.03
SNU114YKL173W YPR003CP53394 754 aa2.37□□□□□ -2.03
SNU114YKL173W IPI3P53877 555 aa2.37□□□□□ -2.03
SNU114YKL173W ALF1P53904 254 aa2.37□□□□□ -2.03
SNU114YKL173W NCS2P53923 493 aaPredicted RBP2.37□□□□□ -2.03
SNU114YKL173W YDR109CQ04585 715 aa2.37□□□□□ -2.03
SNU114YKL173W FMP40Q08968 688 aaPredicted RBP2.37□□□□□ -2.03
SNU114YKL173W LYS21Q12122 440 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W LEU9Q12166 604 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W MDM20Q12387 796 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W SMC4Q12267 1418 aa2.37□□□□□ -2.03
SNU114YKL173W WHI2P12611 486 aa2.37□□□□□ -2.03
SNU114YKL173W YME2P32843 850 aa2.37□□□□□ -2.03
SNU114YKL173W SEF1P34228 1148 aa2.37□□□□□ -2.03
SNU114YKL173W PCH2P38126 564 aa2.37□□□□□ -2.03
SNU114YKL173W HSM3P38348 480 aa2.37□□□□□ -2.03
SNU114YKL173W DIA4P38705 446 aaPredicted RBP2.37□□□□□ -2.03
SNU114YKL173W BUR6P40096 142 aa2.37□□□□□ -2.03
SNU114YKL173W ALT2P52892 507 aa2.37□□□□□ -2.03
SNU114YKL173W YNL144CP53907 740 aa2.37□□□□□ -2.03
SNU114YKL173W SLG1P54867 378 aa2.37□□□□□ -2.03
SNU114YKL173W KAP120Q02932 1032 aa2.37□□□□□ -2.03
SNU114YKL173W DBP9Q06218 594 aaKnown RBP2.37□□□□□ -2.03
SNU114YKL173W RAD34Q06665 692 aa2.37□□□□□ -2.03
SNU114YKL173W INP53Q12271 1107 aa2.37□□□□□ -2.03
SNU114YKL173W YDL007C-AQ2V2Q0 85 aa2.37□□□□□ -2.03
SNU114YKL173W HOM2P13663 365 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W RPL3P14126 387 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W SGV1P23293 657 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W MRPL25P23369 157 aa2.36□□□□□ -2.03
SNU114YKL173W LAC1P28496 418 aa2.36□□□□□ -2.03
SNU114YKL173W YIM1P28625 365 aa2.36□□□□□ -2.03
SNU114YKL173W YME1P32795 747 aa2.36□□□□□ -2.03
SNU114YKL173W HOT13P36078 116 aa2.36□□□□□ -2.03
SNU114YKL173W MIC60P36112 540 aa2.36□□□□□ -2.03
SNU114YKL173W YBL028CP38202 106 aa2.36□□□□□ -2.03
SNU114YKL173W VBA2P38358 474 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W SAP1P39955 897 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W AIM20P40451 204 aa2.36□□□□□ -2.03
SNU114YKL173W YFL015CP43578 164 aa2.36□□□□□ -2.03
SNU114YKL173W DPB11P47027 764 aaPredicted RBP2.36□□□□□ -2.03
SNU114YKL173W TAX4P47030 604 aa2.36□□□□□ -2.03
SNU114YKL173W SHE4P51534 789 aa2.36□□□□□ -2.03
SNU114YKL173W SHE10P53075 577 aa2.36□□□□□ -2.03
SNU114YKL173W OGG1P53397 376 aaPredicted RBP2.36□□□□□ -2.03
SNU114YKL173W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SNU114YKL173W YDR239CQ03780 787 aa2.36□□□□□ -2.03
SNU114YKL173W ARV1Q06541 321 aa2.36□□□□□ -2.03
SNU114YKL173W RUD3Q12234 484 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W CTF3Q12748 733 aa2.36□□□□□ -2.03
SNU114YKL173W SKI3P17883 1432 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W ARO3P14843 370 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W DBP3P20447 523 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W MAK32P23060 363 aa2.36□□□□□ -2.03
SNU114YKL173W SLM4P38247 162 aa2.36□□□□□ -2.03
SNU114YKL173W OTU2P38747 307 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W MLH1P38920 769 aa2.36□□□□□ -2.03
SNU114YKL173W UIP3P39547 235 aa2.36□□□□□ -2.03
SNU114YKL173W VID30P53076 958 aa2.36□□□□□ -2.03
SNU114YKL173W RIM13Q03792 727 aa2.36□□□□□ -2.03
SNU114YKL173W BUD22Q04347 519 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W PLM2Q04383 521 aa2.36□□□□□ -2.03
SNU114YKL173W YLR111WQ12528 110 aa2.36□□□□□ -2.03
SNU114YKL173W SEC39Q12745 709 aa2.36□□□□□ -2.03
SNU114YKL173W CRM1P30822 1084 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W FTH1P38310 465 aa2.36□□□□□ -2.03
SNU114YKL173W RFC1P38630 861 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W ALG5P40350 334 aa2.36□□□□□ -2.03
SNU114YKL173W AIM22P47051 409 aa2.36□□□□□ -2.03
SNU114YKL173W MLC1P53141 149 aa2.36□□□□□ -2.03
SNU114YKL173W YGR111WP53265 400 aa2.36□□□□□ -2.03
SNU114YKL173W DCP2P53550 970 aaKnown RBP2.36□□□□□ -2.03
SNU114YKL173W SEC5P89102 971 aa2.36□□□□□ -2.03
SNU114YKL173W ACL4Q03771 387 aa2.36□□□□□ -2.03
SNU114YKL173W DPB4Q04603 196 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 1160.6 ms