RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W CSR2Q12734 1121 aa2.5□□□□□ -2.01
PEP8YJL053W BRR1Q99177 341 aaPredicted RBP2.5□□□□□ -2.01
PEP8YJL053W GAL80P04387 435 aa2.49□□□□□ -2.01
PEP8YJL053W BAR1P12630 587 aa2.49□□□□□ -2.01
PEP8YJL053W MRP13P12686 339 aa2.49□□□□□ -2.01
PEP8YJL053W SEC62P21825 274 aa2.49□□□□□ -2.01
PEP8YJL053W SHP1P34223 423 aa2.49□□□□□ -2.01
PEP8YJL053W SPC34P36131 295 aa2.49□□□□□ -2.01
PEP8YJL053W CST26P38226 397 aa2.49□□□□□ -2.01
PEP8YJL053W MUM2P38236 366 aa2.49□□□□□ -2.01
PEP8YJL053W MSR1P38714 643 aa2.49□□□□□ -2.01
PEP8YJL053W YHR210CP38893 341 aa2.49□□□□□ -2.01
PEP8YJL053W YJL068CP40363 299 aa2.49□□□□□ -2.01
PEP8YJL053W ESL1P40456 1118 aa2.49□□□□□ -2.01
PEP8YJL053W DOT5P40553 215 aa2.49□□□□□ -2.01
PEP8YJL053W DIM1P41819 318 aaKnown RBP2.49□□□□□ -2.01
PEP8YJL053W SRB7P47822 140 aa2.49□□□□□ -2.01
PEP8YJL053W ARE2P53629 642 aaKnown RBP2.49□□□□□ -2.01
PEP8YJL053W APJ1P53940 528 aa2.49□□□□□ -2.01
PEP8YJL053W MDM1Q01846 1127 aa2.49□□□□□ -2.01
PEP8YJL053W TOF2Q02208 771 aa2.49□□□□□ -2.01
PEP8YJL053W SMA1Q02651 245 aa2.49□□□□□ -2.01
PEP8YJL053W YDR239CQ03780 787 aa2.49□□□□□ -2.01
PEP8YJL053W FMP45Q07651 309 aa2.49□□□□□ -2.01
PEP8YJL053W RLM1Q12224 676 aa2.49□□□□□ -2.01
PEP8YJL053W YBR298C-AQ8TGK4 73 aa2.49□□□□□ -2.01
PEP8YJL053W HSH49Q99181 213 aaPredicted RBP2.49□□□□□ -2.01
PEP8YJL053W YML133CQ03099 1374 aa2.49□□□□□ -2.01
PEP8YJL053W YLL067CQ07888 1374 aa2.49□□□□□ -2.01
PEP8YJL053W YLL066CQ99208 1374 aa2.49□□□□□ -2.01
PEP8YJL053W CAR1P00812 333 aaKnown RBP2.48□□□□□ -2.01
PEP8YJL053W ARG3P05150 338 aa2.48□□□□□ -2.01
PEP8YJL053W CBS2P14905 389 aa2.48□□□□□ -2.01
PEP8YJL053W GLN3P18494 730 aa2.48□□□□□ -2.01
PEP8YJL053W LDB16P25587 256 aa2.48□□□□□ -2.01
PEP8YJL053W ACH1P32316 526 aa2.48□□□□□ -2.01
PEP8YJL053W WBP1P33767 430 aaKnown RBP2.48□□□□□ -2.01
PEP8YJL053W ECM15P35195 104 aa2.48□□□□□ -2.01
PEP8YJL053W RIM2P38127 377 aa2.48□□□□□ -2.01
PEP8YJL053W VID24P38263 362 aa2.48□□□□□ -2.01
PEP8YJL053W YHR218WP38899 603 aa2.48□□□□□ -2.01
PEP8YJL053W NPR2P39923 615 aa2.48□□□□□ -2.01
PEP8YJL053W CSM2P40465 213 aa2.48□□□□□ -2.01
PEP8YJL053W SPO22P40511 975 aa2.48□□□□□ -2.01
PEP8YJL053W MET28P40573 187 aa2.48□□□□□ -2.01
PEP8YJL053W IRC6P43615 237 aa2.48□□□□□ -2.01
PEP8YJL053W PET130P47065 347 aa2.48□□□□□ -2.01
PEP8YJL053W YJR154WP47181 346 aa2.48□□□□□ -2.01
PEP8YJL053W MRPL19P53875 158 aa2.48□□□□□ -2.01
PEP8YJL053W SAM50P53969 484 aa2.48□□□□□ -2.01
PEP8YJL053W MSC1Q03104 513 aa2.48□□□□□ -2.01
PEP8YJL053W DIC1Q06143 298 aa2.48□□□□□ -2.01
PEP8YJL053W THP1Q08231 455 aa2.48□□□□□ -2.01
PEP8YJL053W RIM20Q12033 661 aa2.48□□□□□ -2.01
PEP8YJL053W SEC39Q12745 709 aa2.48□□□□□ -2.01
PEP8YJL053W RAV1P47104 1357 aa2.48□□□□□ -2.01
PEP8YJL053W CDC31P06704 161 aaKnown RBP2.47□□□□□ -2.01
PEP8YJL053W EXO70P19658 623 aa2.47□□□□□ -2.01
PEP8YJL053W PRD1P25375 712 aa2.47□□□□□ -2.01
PEP8YJL053W BNA4P38169 460 aa2.47□□□□□ -2.01
PEP8YJL053W OTU2P38747 307 aaKnown RBP2.47□□□□□ -2.01
PEP8YJL053W SGN1P40561 250 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
PEP8YJL053W GUF1P46943 645 aa2.47□□□□□ -2.01
PEP8YJL053W TWF1P53250 332 aa2.47□□□□□ -2.01
PEP8YJL053W TLG2Q08144 397 aa2.47□□□□□ -2.01
PEP8YJL053W THI20Q08224 551 aa2.47□□□□□ -2.01
PEP8YJL053W YOR365CQ08844 703 aa2.47□□□□□ -2.01
PEP8YJL053W ATG29Q12092 213 aa2.47□□□□□ -2.01
PEP8YJL053W LSP1Q12230 341 aaKnown RBP2.47□□□□□ -2.01
PEP8YJL053W PEP4P07267 405 aaKnown RBP2.46□□□□□ -2.02
PEP8YJL053W RED1P14291 827 aa2.46□□□□□ -2.02
PEP8YJL053W CKA1P15790 372 aa2.46□□□□□ -2.02
PEP8YJL053W YCR007CP25354 239 aa2.46□□□□□ -2.02
PEP8YJL053W BUD14P27637 709 aa2.46□□□□□ -2.02
PEP8YJL053W MRE11P32829 692 aa2.46□□□□□ -2.02
PEP8YJL053W SWH1P35845 1188 aa2.46□□□□□ -2.02
PEP8YJL053W CMC1P36064 111 aa2.46□□□□□ -2.02
PEP8YJL053W CBP4P37267 147 aa2.46□□□□□ -2.02
PEP8YJL053W NOC2P39744 710 aaKnown RBP2.46□□□□□ -2.02
PEP8YJL053W CAF130P53280 1122 aaPredicted RBP2.46□□□□□ -2.02
PEP8YJL053W SPC19Q03954 165 aa2.46□□□□□ -2.02
PEP8YJL053W PDS5Q04264 1277 aa2.46□□□□□ -2.02
PEP8YJL053W RBA50Q04418 439 aa2.46□□□□□ -2.02
PEP8YJL053W IVY1Q04934 453 aa2.46□□□□□ -2.02
PEP8YJL053W COQ9Q05779 260 aa2.46□□□□□ -2.02
PEP8YJL053W SFI1Q12369 946 aa2.46□□□□□ -2.02
PEP8YJL053W PDH1Q12428 516 aaKnown RBP2.46□□□□□ -2.02
PEP8YJL053W YDL007C-AQ2V2Q0 85 aa2.46□□□□□ -2.02
PEP8YJL053W COR1P07256 457 aa2.45□□□□□ -2.02
PEP8YJL053W APE1P14904 514 aa2.45□□□□□ -2.02
PEP8YJL053W MTF1P14908 341 aaKnown RBP2.45□□□□□ -2.02
PEP8YJL053W PRP2P20095 876 aaPredicted RBP2.45□□□□□ -2.02
PEP8YJL053W RPS2P25443 254 aaKnown RBP2.45□□□□□ -2.02
PEP8YJL053W PTR2P32901 601 aa2.45□□□□□ -2.02
PEP8YJL053W AVT5P38176 459 aa2.45□□□□□ -2.02
PEP8YJL053W OSH3P38713 996 aaKnown RBP2.45□□□□□ -2.02
PEP8YJL053W YEL057CP39983 233 aa2.45□□□□□ -2.02
PEP8YJL053W MET18P40469 1032 aa2.45□□□□□ -2.02
PEP8YJL053W HXT14P42833 540 aa2.45□□□□□ -2.02
PEP8YJL053W ELP2P42935 788 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms